Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30084
(711 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 181 4e-46
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 181 4e-46
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 181 4e-46
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 181 5e-46
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 180 1e-45
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 179 2e-45
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 178 3e-45
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 178 3e-45
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 177 6e-45
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 100 1e-21
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 100 1e-21
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 100 1e-21
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 100 1e-21
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 100 2e-21
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 100 2e-21
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 97 1e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 64 1e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 2e-10
At4g37190.1 68417.m05265 expressed protein 31 0.57
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.3
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 4.0
At1g20650.1 68414.m02587 protein kinase family protein contains ... 28 5.3
At1g08370.1 68414.m00926 hydroxyproline-rich glycoprotein family... 28 5.3
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 28 7.0
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 7.0
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 9.3
At1g50460.1 68414.m05656 hexokinase, putative similar to hexokin... 27 9.3
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 181 bits (441), Expect = 4e-46
Identities = 89/138 (64%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 185 AT-LSVHQLVENADECMV 201
Score = 115 bits (277), Expect = 3e-26
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 181 bits (441), Expect = 4e-46
Identities = 89/138 (64%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 185 AT-LSVHQLVENADECMV 201
Score = 118 bits (284), Expect = 4e-27
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 181 bits (441), Expect = 4e-46
Identities = 89/138 (64%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 185 AT-LSVHQLVENADECMV 201
Score = 116 bits (278), Expect = 2e-26
Identities = 49/70 (70%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 181 bits (440), Expect = 5e-46
Identities = 88/138 (63%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 126 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 185
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 186 AT-LSVHQLVENADECMV 202
Score = 120 bits (289), Expect = 1e-27
Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 240
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 241 VPRAISSTWSP 273
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 180 bits (437), Expect = 1e-45
Identities = 87/138 (63%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 126 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 185
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 186 AT-LSVHQLVENADECMV 202
Score = 124 bits (300), Expect = 4e-29
Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 240
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 241 VPRAISSTWSP 273
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 179 bits (435), Expect = 2e-45
Identities = 87/138 (63%), Positives = 101/138 (73%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 185 AT-LSVHQLVENADECMV 201
Score = 122 bits (294), Expect = 2e-28
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 244 PRAISSTWSP 273
PRAI P
Sbjct: 61 PRAILMDLEP 70
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 178 bits (433), Expect = 3e-45
Identities = 87/138 (63%), Positives = 100/138 (72%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 185 AT-LSVHQLVENADECMV 201
Score = 121 bits (291), Expect = 5e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 178 bits (433), Expect = 3e-45
Identities = 87/138 (63%), Positives = 100/138 (72%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+CDCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 185 AT-LSVHQLVENADECMV 201
Score = 121 bits (291), Expect = 5e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 177 bits (431), Expect = 6e-45
Identities = 88/138 (63%), Positives = 100/138 (72%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
E+ DCLQGFQ+ + P +SV PSPKVSDTVVEPYN
Sbjct: 125 ENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDETLL 668
AT LS ++N DE ++
Sbjct: 185 AT-LSVHQLVENADECMV 201
Score = 120 bits (290), Expect = 7e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 100 bits (239), Expect = 1e-21
Identities = 53/137 (38%), Positives = 80/137 (58%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
+C LQGF + +S ++V PSP+VS +VVEPYN+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 618 TSLSSPA*LKNTDETLL 668
LS+ + L++TD ++L
Sbjct: 188 V-LSTHSLLEHTDVSIL 203
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 100 bits (239), Expect = 1e-21
Identities = 53/137 (38%), Positives = 80/137 (58%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
+C LQGF + +S ++V PSP+VS +VVEPYN+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 618 TSLSSPA*LKNTDETLL 668
LS+ + L++TD ++L
Sbjct: 188 V-LSTHSLLEHTDVSIL 203
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 100 bits (239), Expect = 1e-21
Identities = 53/137 (38%), Positives = 80/137 (58%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
+C LQGF + +S ++V PSP+VS +VVEPYN+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 618 TSLSSPA*LKNTDETLL 668
LS+ + L++TD ++L
Sbjct: 188 V-LSTHSLLEHTDVSIL 203
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 100 bits (239), Expect = 1e-21
Identities = 53/137 (38%), Positives = 80/137 (58%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
+C LQGF + +S ++V PSP+VS +VVEPYN+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNS 187
Query: 618 TSLSSPA*LKNTDETLL 668
LS+ + L++TD ++L
Sbjct: 188 V-LSTHSLLEHTDVSIL 203
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 99.5 bits (237), Expect = 2e-21
Identities = 53/137 (38%), Positives = 78/137 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
+C LQGF + +S +++ PSP+VS VVEPYN+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187
Query: 618 TSLSSPA*LKNTDETLL 668
LS+ + L++TD +L
Sbjct: 188 V-LSTHSLLEHTDVAVL 203
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 99.5 bits (237), Expect = 2e-21
Identities = 53/137 (38%), Positives = 78/137 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
+C LQGF + +S +++ PSP+VS VVEPYN+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNS 187
Query: 618 TSLSSPA*LKNTDETLL 668
LS+ + L++TD +L
Sbjct: 188 V-LSTHSLLEHTDVAVL 203
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 96.7 bits (230), Expect = 1e-20
Identities = 50/137 (36%), Positives = 79/137 (57%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK ++
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
+C LQGF + +S +++ PSP+VS VVEPYN+
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNS 187
Query: 618 TSLSSPA*LKNTDETLL 668
LS+ + L++TD +L
Sbjct: 188 V-LSTHSLLEHTDVVVL 203
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 428
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 429 ESESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSP-KVSDTVVE 605
E++ D L+GF L + YSV P+ + SD VV+
Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQ 184
Query: 606 PYNA 617
PYN+
Sbjct: 185 PYNS 188
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 246
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 RAI 255
RA+
Sbjct: 63 RAL 65
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 428
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 429 ESESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSP-KVSDTVVE 605
E++ D L+GF L + YSV P+ + SD VV+
Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQ 184
Query: 606 PYNA 617
PYN+
Sbjct: 185 PYNS 188
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 246
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 RAI 255
RA+
Sbjct: 63 RAL 65
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.5 bits (68), Expect = 0.57
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 231
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 232 GKYVPRAISSTWSPAPWTLSA 294
Y PR +S A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 396 LVDSVLDVVRKESESCDCLQGF 461
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 63 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 149
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At1g20650.1 68414.m02587 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 585
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 458 LPTYTFPRWRHRVRYGHLLISKIREEYPDRIMN 556
L T++ P + + ++GHL+ +R +YP R +N
Sbjct: 496 LVTWSRPYLKDQKKFGHLVDPSLRGKYPRRCLN 528
>At1g08370.1 68414.m00926 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; contains some similarity to
transcription factor [Danio rerio]
gi|15617376|emb|CAC69871
Length = 367
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 403 TRSSM*SAKNQNLAIAYRASNLHIPSVAAPGPVWAPPHLKDP 528
T S S Q+ AI ++ H P++A P APP ++ P
Sbjct: 197 TASGSASGPYQSSAIPHQPHQPHQPTIAPPVAAAAPPQIQSP 238
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 267 PSRRDGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSNLVTTL 94
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S + V TL
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2
Query: 410 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 294
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 70 EIVHLQAGQCGNQIGAKFWEIISD 141
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g50460.1 68414.m05656 hexokinase, putative similar to hexokinase
1 [Spinacia oleracea] Swiss-Prot:Q9SEK3
Length = 498
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -3
Query: 709 PEADVVIEPFVVRCSKVSSVFFN*AGELREVA 614
P + V+ EP+V+R + VS++ + EL+EVA
Sbjct: 342 PISPVLSEPYVLRTNSVSAIHEDDTPELQEVA 373
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,941
Number of Sequences: 28952
Number of extensions: 319121
Number of successful extensions: 999
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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