Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30083
         (851 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2035|AAF55191.1|  162|Drosophila melanogaster CG14867-P...    31   2.7  
BT011450-1|AAR99108.1|  228|Drosophila melanogaster RE41058p pro...    29   6.1  
AY059446-1|AAL13352.1|  181|Drosophila melanogaster GH19563p pro...    29   6.1  
AE014297-3699|AAN14035.1|  131|Drosophila melanogaster CG11791-P...    29   6.1  
AE014297-3698|AAF56386.1|  181|Drosophila melanogaster CG11791-P...    29   6.1  

>AE014297-2035|AAF55191.1|  162|Drosophila melanogaster CG14867-PA
           protein.
          Length = 162

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 172 IAVEAMKCKEENCEVGVVLERNSLIVLSLTRPSSASAGGIGTIPSSAGKS 321
           +A+E ++C+E   E+   L+       + +   S S+GG  TIP+SA  S
Sbjct: 82  VALENVRCEELQIELTSALKAKQASRSACSGMGSVSSGGGATIPTSASSS 131


>BT011450-1|AAR99108.1|  228|Drosophila melanogaster RE41058p
           protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 521 NERASFRSLRKNIRGRWKRLVKKK 592
           ++++SF+  RK   GR+KRLV +K
Sbjct: 183 SDKSSFKGFRKQFSGRFKRLVTRK 206


>AY059446-1|AAL13352.1|  181|Drosophila melanogaster GH19563p
           protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 521 NERASFRSLRKNIRGRWKRLVKKK 592
           ++++SF+  RK   GR+KRLV +K
Sbjct: 137 SDKSSFKGFRKQFSGRFKRLVTRK 160


>AE014297-3699|AAN14035.1|  131|Drosophila melanogaster CG11791-PB,
           isoform B protein.
          Length = 131

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 521 NERASFRSLRKNIRGRWKRLVKKK 592
           ++++SF+  RK   GR+KRLV +K
Sbjct: 87  SDKSSFKGFRKQFSGRFKRLVTRK 110


>AE014297-3698|AAF56386.1|  181|Drosophila melanogaster CG11791-PA,
           isoform A protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 521 NERASFRSLRKNIRGRWKRLVKKK 592
           ++++SF+  RK   GR+KRLV +K
Sbjct: 137 SDKSSFKGFRKQFSGRFKRLVTRK 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,287,386
Number of Sequences: 53049
Number of extensions: 648204
Number of successful extensions: 2065
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2058
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)