Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30077
         (849 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P42852 Cluster: Pupal cuticle protein precursor; n=1; B...    99   2e-19
UniRef50_UPI0000546B3D Cluster: PREDICTED: hypothetical protein;...    37   0.56 
UniRef50_Q4UFM9 Cluster: Putative uncharacterized protein; n=2; ...    36   1.3  
UniRef50_Q4P5S4 Cluster: Putative uncharacterized protein; n=1; ...    36   1.7  
UniRef50_Q16EK6 Cluster: Cuticle protein, putative; n=2; Culicid...    35   3.0  
UniRef50_O75636 Cluster: Ficolin-3 precursor; n=9; Eutheria|Rep:...    35   3.0  
UniRef50_Q9VDJ8 Cluster: CG5494-PA; n=3; Sophophora|Rep: CG5494-...    34   3.9  
UniRef50_Q82HF3 Cluster: Putative uncharacterized protein; n=2; ...    33   6.9  
UniRef50_UPI0000E1F6EA Cluster: PREDICTED: hypothetical protein;...    33   9.1  
UniRef50_Q28M53 Cluster: Oligopeptide/dipeptide ABC transporter ...    33   9.1  
UniRef50_O83469 Cluster: Uncharacterized lipoprotein TP_0456 pre...    33   9.1  

>UniRef50_P42852 Cluster: Pupal cuticle protein precursor; n=1;
           Bombyx mori|Rep: Pupal cuticle protein precursor -
           Bombyx mori (Silk moth)
          Length = 253

 Score = 98.7 bits (235), Expect = 2e-19
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +2

Query: 257 QARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQQAEGK 382
           QARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQQAEGK
Sbjct: 45  QARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQQAEGK 86



 Score = 94.7 bits (225), Expect = 3e-18
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +3

Query: 126 MKSMIVVACLALACGAHASGWAGPPANIALSQDGRNILDTPEV 254
           MKSMIVVACLALACGAHASGWAGPPANIALSQDGRNILDTPEV
Sbjct: 1   MKSMIVVACLALACGAHASGWAGPPANIALSQDGRNILDTPEV 43



 Score = 33.1 bits (72), Expect = 9.1
 Identities = 28/90 (31%), Positives = 36/90 (40%)
 Frame = +1

Query: 511 PVAETPEVXXXXXXXXXXXXXXXXXXXXXTNNGTAPASPRDWDCPAHQGLESFPVHQELG 690
           PVAETPEV                          APA  +DW+ PAHQ   + P HQ+  
Sbjct: 130 PVAETPEVAQARAAHLAALSAAKSAAPAQ-QQWNAPAH-QDWNAPAHQDWNA-PAHQDWN 186

Query: 691 MLPVQPINWNRRPPFLGNSGLPPVNQARLK 780
               Q  +WN  P +   SG P    A ++
Sbjct: 187 APAHQ--SWNGAPSW--QSGAPAHQPANIR 212



 Score = 33.1 bits (72), Expect = 9.1
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 AGPPANIALSQDGRNILDTPEV 254
           A  PANI L+ DG  ILDTPEV
Sbjct: 205 AHQPANIRLANDGSGILDTPEV 226


>UniRef50_UPI0000546B3D Cluster: PREDICTED: hypothetical protein;
           n=4; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 749

 Score = 37.1 bits (82), Expect = 0.56
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 391 CSRSCLERCPRPLMERCPCCCSFMERCPSSFLE-CCRICSPPVAET-PE 531
           CS +C E C +   E CP  CSF   CP + L+ C   CS P + T PE
Sbjct: 127 CSFTCPETCLKTCSETCPKPCSF--TCPETCLKTCSETCSKPSSFTCPE 173



 Score = 36.7 bits (81), Expect = 0.74
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 382 MERCSRSCLERCPRPLMERCP--CCCSFMERCPSSFLECCRICSP 510
           ++ CS +C E CP+P    CP  C  ++ E C  +  + C   +P
Sbjct: 232 LKTCSETCSETCPKPCSFTCPESCLKTYSETCSDTLSKSCSFNNP 276



 Score = 34.7 bits (76), Expect = 3.0
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 391 CSRSCLERCPRPLMERCPCCCSFMERCPSSFLE-CCRICS 507
           C ++C E C +   + CP  CSF   CP ++L+ C   CS
Sbjct: 203 CPQTCSETCLKTCSDTCPKPCSF--TCPDTYLKTCSETCS 240



 Score = 34.3 bits (75), Expect = 3.9
 Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 12/61 (19%)
 Frame = +1

Query: 385 ERCSRSCLERCPRPLMERCP--CCCSFMERC--PSSFL--ECC-----RICSPPVAET-P 528
           E C ++C E CP+P    CP  C  +  E C  PSSF   E C      ICS P + T P
Sbjct: 133 ETCLKTCSETCPKPCSFTCPETCLKTCSETCSKPSSFTCPETCIKTSSDICSKPCSFTCP 192

Query: 529 E 531
           E
Sbjct: 193 E 193



 Score = 33.1 bits (72), Expect = 9.1
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +1

Query: 385 ERCSRSCLERCPRPLMERC--PCCCSFMERCPSSFLE-CCRICSPPVAET 525
           + C ++C E C     E C  PC  +F + CP +  E C   C    +ET
Sbjct: 281 DNCLKTCSETCSTTCSETCSKPCSFTFPDTCPKTCPEPCTSSCPETSSET 330


>UniRef50_Q4UFM9 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 1506

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 403 CLERCPRPLMERCPCCCSFMERCPSSFLECCRICSPPVAE 522
           C E+CP+   E+C CC    + C      CC IC    +E
Sbjct: 873 CCEKCPKTCSEKCACC---SKDCSGCCCMCCLICKKKESE 909


>UniRef50_Q4P5S4 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 505

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +3

Query: 168 GAHASGWAGPPANIALSQDGRNILDTPEVHRLVPHTFPLFSRLRKITPTQMTTDHTTLDG 347
           G H   W  PP+N+ + +  R+   T  + R++ H    +S L  I   Q+   +   DG
Sbjct: 134 GTHTFSWVSPPSNVLIVKKARDHRATKAMSRIIKHIRSTYSWLNIILEQQVVDSN---DG 190

Query: 348 TMKSTGNKL 374
            + ST  +L
Sbjct: 191 DLASTHPEL 199


>UniRef50_Q16EK6 Cluster: Cuticle protein, putative; n=2;
           Culicidae|Rep: Cuticle protein, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 322

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +2

Query: 260 ARAAHISALQQA-SKNNPNPNDDGSYDPR-WDNEEYWQ 367
           A+ AH++AL  A +  +  P DDGSY P  WD+  Y Q
Sbjct: 278 AKEAHLNALASAHAAASHGPEDDGSYKPELWDDHHYQQ 315


>UniRef50_O75636 Cluster: Ficolin-3 precursor; n=9; Eutheria|Rep:
           Ficolin-3 precursor - Homo sapiens (Human)
          Length = 299

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 745 NCPG-REASGSN*LVEPEAFQVPGEPGSFPVLGGRGNPSPLVKLGP 611
           +CPG RE   S  ++ P     PG PG     G +G P P  K+GP
Sbjct: 28  SCPGPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGPPGKMGP 73


>UniRef50_Q9VDJ8 Cluster: CG5494-PA; n=3; Sophophora|Rep: CG5494-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 381

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
 Frame = +2

Query: 260 ARAAHISALQQASKNNPNPN---DDGSYDPRWD 349
           A+AAH +AL QAS +    +   DDGSYD RW+
Sbjct: 270 AKAAHYAALSQASAHGGASHGSWDDGSYDGRWE 302


>UniRef50_Q82HF3 Cluster: Putative uncharacterized protein; n=2;
           Streptomyces|Rep: Putative uncharacterized protein -
           Streptomyces avermitilis
          Length = 903

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = +3

Query: 636 GLPRPPRTGKLPGSPGTWNASGSTN*LEPEASLPGQFRVAPG*PS 770
           G PRPP    +PG+PGT  A G+     P AS PG    APG P+
Sbjct: 308 GAPRPPGAPGVPGAPGTPGAPGAM----PPASGPG----APGTPA 344


>UniRef50_UPI0000E1F6EA Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 406

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 582 RCSCPNKQWNGPSFTKGLGLPRPPRTGKLPGSPGTWNAS 698
           RC C + +  G  + KG   P PPR G   G P  W A+
Sbjct: 343 RCCCVSSKGKGAHWCKGGEAPEPPRRGSCSG-PTPWRAA 380


>UniRef50_Q28M53 Cluster: Oligopeptide/dipeptide ABC transporter
           ATP-binding protein-like protein; n=5; Bacteria|Rep:
           Oligopeptide/dipeptide ABC transporter ATP-binding
           protein-like protein - Jannaschia sp. (strain CCS1)
          Length = 341

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 385 ERCSRSCLERCPRPLMERCPCCCSFMERCPSSFLECCRICSPPVAETPE 531
           ER  R  + +   P++   P  CSF +RCP +F  C R  +P +A   E
Sbjct: 278 ERADRLQVIQGQPPMLGAPPSACSFRDRCPHAFDRCARE-NPQLASVGE 325


>UniRef50_O83469 Cluster: Uncharacterized lipoprotein TP_0456
           precursor; n=1; Treponema pallidum|Rep: Uncharacterized
           lipoprotein TP_0456 precursor - Treponema pallidum
          Length = 438

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 579 VRCSCPNKQWNGPSFTKGLGLPRPPRTGKLPGSPGTWNAS 698
           VR      +W   ++T+ LGLPR  +   L  + GTW AS
Sbjct: 194 VRYDVRTARWTSVAYTRALGLPRNAQCTALTHTRGTWYAS 233


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,491,271
Number of Sequences: 1657284
Number of extensions: 18751023
Number of successful extensions: 63475
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 57903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63315
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)