Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30077
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.7  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   1.7  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    25   3.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   3.8  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   6.7  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   6.7  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   6.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   6.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.9  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 700 PEAFQVPGEPGSFPVLGGRGNPSPLVKLG 614
           P    +PG PG+ P+L G   P P   +G
Sbjct: 87  PRPGMIPGMPGAPPLLMGPNGPLPPPMMG 115



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 648 PPRTGKLPGSPG 683
           PPR G +PG PG
Sbjct: 86  PPRPGMIPGMPG 97


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 123 KMKSMIVVACLALACGAHASGWAGPPANIALSQDGRNILDTPE 251
           K+ +  +V C+ LA GA        P+++    D   + D PE
Sbjct: 2   KLYAFALVLCVGLAVGAEVDSVPEVPSDLQQQLDELQLADKPE 44


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 350 CPI*GRMIRRHLGWGYFSKPAEERKCVRHEPV 255
           CPI G  +R  L W Y  +P   R  V   PV
Sbjct: 6   CPIIGVNVRVWLFWSYLRRPRLSRFLVGCIPV 37


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +1

Query: 391  CSRSCLERCPRPLMERCPCCCSFMERCPSSFLECCR 498
            C RS L R  R    RCP C    E        C R
Sbjct: 955  CFRSYLHRFNRASSSRCPACKDEDETVDHVMFHCPR 990


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 293 ASKNNPNPNDDGSYDPRW 346
           A   NPNPN   S  P W
Sbjct: 637 AKTGNPNPNTASSEFPEW 654


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 293 ASKNNPNPNDDGSYDPRW 346
           A   NPNPN   S  P W
Sbjct: 637 AKTGNPNPNTASSEFPEW 654


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 293 ASKNNPNPNDDGSYDPRW 346
           A   NPNPN   S  P W
Sbjct: 523 AKTGNPNPNTASSEFPEW 540


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +3

Query: 612 GPSFTKGL-GLPRPPRTGKLPGSPG 683
           G   T GL G+P PP    LPG+ G
Sbjct: 388 GDKGTTGLPGIPGPPCVDGLPGAAG 412


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 756 GQPGIAQEGRPPVP 715
           G PG A+EGRP  P
Sbjct: 533 GTPGDAKEGRPGAP 546


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 11/36 (30%), Positives = 13/36 (36%)
 Frame = +1

Query: 391 CSRSCLERCPRPLMERCPCCCSFMERCPSSFLECCR 498
           C RS L +        CP C S +E        C R
Sbjct: 892 CFRSYLHKYRHASSPDCPACVSIVESTEHVLFHCPR 927


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,483
Number of Sequences: 2352
Number of extensions: 19490
Number of successful extensions: 58
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)