Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30074
(556 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 135 2e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 135 2e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 135 2e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 135 2e-32
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 135 2e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 135 2e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 135 2e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 135 2e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 135 2e-32
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 135 2e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 134 4e-32
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 134 5e-32
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 128 3e-30
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 110 7e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 83 1e-16
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 64 5e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 64 6e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 60 1e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 2e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 3e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 48 3e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 48 6e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 48 6e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 47 1e-05
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 46 1e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 1e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 1e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 46 2e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 45 4e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 44 5e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 43 1e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 2e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 42 3e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 42 4e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 42 4e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.001
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 40 0.001
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 39 0.002
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.002
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 37 0.008
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 37 0.010
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.032
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 35 0.032
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.042
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.073
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.17
At1g11970.1 68414.m01383 hypothetical protein 32 0.22
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.39
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.39
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.2
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.2
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.2
At5g12280.1 68418.m01444 hypothetical protein 29 1.6
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.1
At1g47680.1 68414.m05297 hypothetical protein 29 2.1
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 4.8
At2g20130.1 68415.m02352 expressed protein contains Pfam domain,... 28 4.8
At3g22380.1 68416.m02825 expressed protein 27 6.4
At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 27 6.4
At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 27 6.4
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 6.4
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 8.4
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 101
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 79 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 237
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 101
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 79 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 237
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 101
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 79 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 237
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 365
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 366 QKESTLHLV 374
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 101
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 382 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 79 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 237
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 101
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 79 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 237
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 290 QKESTLHLV 298
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +2
Query: 296 LAVLRFYKVDENGKIHRLRREFTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 457
LAVL+FYK+D +GK+ RLR+E CGAG FMA DRHYCGKC T V++ +
Sbjct: 100 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 72.9 bits (171), Expect = 1e-13
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +2
Query: 296 LAVLRFYKVDENGKIHRLRREFTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 457
LAVL+FYKVD +GK+ RLR+E CGAG FMA DRHYCGKC T V++ +
Sbjct: 100 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 186 KESTLHLV 209
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 132 bits (319), Expect = 2e-31
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 153 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNI 212
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 213 QKESTLHLV 221
Score = 128 bits (309), Expect = 2e-30
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D NI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NI 136
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 137 QKESTLHLV 145
Score = 97.1 bits (231), Expect = 7e-21
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 158
QIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 229 QIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 186 KESTLHLV 209
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 135 bits (327), Expect = 2e-32
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 62 QKESTLHLV 70
Score = 74.9 bits (176), Expect = 3e-14
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2
Query: 296 LAVLRFYKVDENGKIHRLRREFTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 463
LAVL+FYKVD +GK+ RL++E CG G FMA DRHYCGKC +T VFK D+
Sbjct: 100 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 134 bits (324), Expect = 4e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 78 QIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 137
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 138 QKESTLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYNI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNI 213
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 214 QKESTLHLV 222
Score = 120 bits (288), Expect = 9e-28
Identities = 56/69 (81%), Positives = 64/69 (92%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN+
Sbjct: 2 QIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNV 61
Query: 183 QKESTLHLV 209
Q++STLHL+
Sbjct: 62 QEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 134 bits (323), Expect = 5e-32
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYNI
Sbjct: 80 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNI 139
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 127 bits (306), Expect = 6e-30
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 156 QIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 215
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 216 QKESTLHLV 224
Score = 118 bits (284), Expect = 3e-27
Identities = 60/70 (85%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDYN 179
QIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DYN
Sbjct: 232 QIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYN 291
Query: 180 IQKESTLHLV 209
IQKESTLHLV
Sbjct: 292 IQKESTLHLV 301
Score = 102 bits (245), Expect = 1e-22
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+DY+I
Sbjct: 4 QIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSI 63
Query: 183 QKESTLHL 206
QK+S LHL
Sbjct: 64 QKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 128 bits (308), Expect = 3e-30
Identities = 62/69 (89%), Positives = 66/69 (95%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNI
Sbjct: 80 QIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNI 139
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 140 QKESTLHLV 148
Score = 117 bits (281), Expect = 6e-27
Identities = 57/69 (82%), Positives = 63/69 (91%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYNI
Sbjct: 4 QIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNI 63
Query: 183 QKESTLHLV 209
QKESTLHLV
Sbjct: 64 QKESTLHLV 72
Score = 104 bits (250), Expect = 3e-23
Identities = 52/69 (75%), Positives = 58/69 (84%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+I
Sbjct: 553 QIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDI 612
Query: 183 QKESTLHLV 209
K+STL+LV
Sbjct: 613 HKKSTLYLV 621
Score = 104 bits (249), Expect = 5e-23
Identities = 54/71 (76%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRTLSDY 176
QIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG TL+DY
Sbjct: 320 QIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADY 379
Query: 177 NIQKESTLHLV 209
+IQKESTLHLV
Sbjct: 380 SIQKESTLHLV 390
Score = 99 bits (238), Expect = 1e-21
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
QIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYNI
Sbjct: 394 QIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNI 453
Query: 183 QKESTLHL 206
+ ESTLHL
Sbjct: 454 RNESTLHL 461
Score = 90.6 bits (215), Expect = 6e-19
Identities = 49/73 (67%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Frame = +3
Query: 6 IFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLS 170
IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+
Sbjct: 240 IFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLA 299
Query: 171 DYNIQKESTLHLV 209
YNIQK STL+LV
Sbjct: 300 HYNIQKGSTLYLV 312
Score = 87.0 bits (206), Expect = 7e-18
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Frame = +3
Query: 3 QIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGR 161
QIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED R
Sbjct: 156 QIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNR 215
Query: 162 TLSDYNIQKESTLHL 206
TL+DY I+ STL L
Sbjct: 216 TLADYGIRNRSTLCL 230
Score = 86.6 bits (205), Expect = 1e-17
Identities = 48/74 (64%), Positives = 53/74 (71%), Gaps = 7/74 (9%)
Frame = +3
Query: 3 QIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR 161
QIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L R
Sbjct: 470 QIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSR 529
Query: 162 TLSDYNIQKESTLH 203
TL DYNIQK ST+H
Sbjct: 530 TLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 110 bits (264), Expect = 7e-25
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DYNIQ
Sbjct: 88 IFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQ 147
Query: 186 KESTLHLV 209
+S LHL+
Sbjct: 148 NDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+
Sbjct: 2 EIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNL 61
Query: 183 QKESTLHLV 209
++ S LHLV
Sbjct: 62 ERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 143
IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 52 IFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SDYNI
Sbjct: 142 RIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNI 201
Query: 183 QKESTL 200
+ ++ L
Sbjct: 202 KPDANL 207
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y++
Sbjct: 25 ELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHL 84
Query: 183 QKESTLHLV 209
+ TLHL+
Sbjct: 85 ENGHTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/70 (41%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 179
QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+
Sbjct: 96 QIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYS 155
Query: 180 IQKESTLHLV 209
I+++++L LV
Sbjct: 156 IEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDY 176
+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 2 KIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEEN 61
Query: 177 NIQKES 194
N+ + S
Sbjct: 62 NVVENS 67
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 191
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 192 STLHLV 209
T+H+V
Sbjct: 82 HTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 191
V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 192 STLHLV 209
T+H+V
Sbjct: 82 HTVHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
+++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I
Sbjct: 3 VYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMIL 62
Query: 186 KESTLHL 206
ES L L
Sbjct: 63 FESRLLL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 173
+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 174 YNIQKES 194
+ + S
Sbjct: 62 NKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 173
+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 174 YNIQKES 194
+ + S
Sbjct: 62 NKVAENS 68
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 179
+I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY+
Sbjct: 12 RIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYH 71
Query: 180 IQKESTLHLV 209
+++ TL+LV
Sbjct: 72 VEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/69 (30%), Positives = 42/69 (60%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS +
Sbjct: 2 RITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGV 61
Query: 183 QKESTLHLV 209
+ + L ++
Sbjct: 62 KDDDLLMMM 70
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 173
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 174 YNIQKESTL 200
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 173
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 174 YNIQKESTL 200
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 173
++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 174 YNIQKESTL 200
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLSD 173
++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL +
Sbjct: 2 KLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVE 61
Query: 174 YNIQKESTL 200
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 191
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 192 STL 200
S L
Sbjct: 65 SLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 191
V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++I +
Sbjct: 5 VENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQN 64
Query: 192 STLHL 206
LHL
Sbjct: 65 PLLHL 69
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 179
Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 10 QFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS--- 66
Query: 180 IQKESTLHLV 209
Q ++T++LV
Sbjct: 67 -QPDATVNLV 75
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 186 KESTLHLV 209
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 186 KESTLHLV 209
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 179
+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+ N
Sbjct: 662 KIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQN 721
Query: 180 IQKESTLHLV 209
+Q S +HL+
Sbjct: 722 VQPNSLVHLI 731
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 27 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 206
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 207 V 209
+
Sbjct: 604 M 604
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
+F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + I
Sbjct: 3 VFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVIL 62
Query: 186 KESTLHL 206
S + L
Sbjct: 63 NHSRIQL 69
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLSD 173
Q+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+ D
Sbjct: 2 QVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDD 61
Query: 174 YNIQKESTLHL 206
Y I+ H+
Sbjct: 62 YKIKACDIFHM 72
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 179
+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++ N
Sbjct: 501 KIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQN 560
Query: 180 IQKESTLHLV 209
+Q S +HL+
Sbjct: 561 VQPNSLVHLL 570
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 176
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 177 NIQKESTLHLV 209
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
++ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I
Sbjct: 3 KVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQI 62
Query: 183 QKESTLHL 206
+ S + L
Sbjct: 63 RHNSRILL 70
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 179
Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ +S
Sbjct: 10 QFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS--- 66
Query: 180 IQKESTLHLV 209
Q ++T++LV
Sbjct: 67 -QSDTTMNLV 75
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 173
+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 2 KIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTMEA 61
Query: 174 YNIQKESTLHLV 209
+ +S + ++
Sbjct: 62 NKVFDKSVIAII 73
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 185
+ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 38 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 97
Query: 186 KESTLHL 206
S + L
Sbjct: 98 HNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 113
IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 51 IFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 155
+F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 3 VFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 35.1 bits (77), Expect = 0.032
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 140
V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 5 VEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 35.1 bits (77), Expect = 0.032
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 140
+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 2 KFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 42 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 155
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 3 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 164
++FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 12 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 155
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 21 LTGKTITLEVEPSDTIENVKAKIQDKEGIP 110
L+ K I +E++P D IE +K I+++ GIP
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.39
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 42 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 200
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 6 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 179
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 180 IQKESTLHLV 209
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -3
Query: 209 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 90
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +3
Query: 57 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 173
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 57 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 30 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 182
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 188 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 90
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 206
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 185 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 90
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g20130.1 68415.m02352 expressed protein contains Pfam domain,
PF04367: Protein of unknown function (DUF502)
Length = 256
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 248 LLLAFLSATTKPQHQVEGGFLLDIVVREGTSIFQLLSSKDQPLL-IGRDS 102
+LL + +P V G ++IVV G S+ Q+LS+ D+PL IG +S
Sbjct: 209 ILLVNSNDVIRPNLSVREG--IEIVVSGGMSMPQILSTLDKPLASIGNES 256
>At3g22380.1 68416.m02825 expressed protein
Length = 1550
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 148 WKMDVPSRTTISRRNPPSTWC*GFVVALRNARRRITHTQEDQAQEEE 288
WK + P T ++ PS VA ++ R I H Q+ + Q+ +
Sbjct: 1269 WKNNSPRTTNTTQAQSPSMLSPSTSVAAASSLRNIPHKQQSRPQQSQ 1315
>At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 412
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 481 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLAC 362
L+ TY + + DH A+TLP L + A LAC
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLAC 131
>At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 408
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 481 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLAC 362
L+ TY + + DH A+TLP L + A LAC
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLAC 131
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 57 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 209
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 97 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 201
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,039,641
Number of Sequences: 28952
Number of extensions: 250808
Number of successful extensions: 828
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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