BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30071 (477 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 141 6e-35 SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 141 6e-35 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 141 6e-35 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 81 1e-16 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 73 3e-14 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 53 2e-08 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.004 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.004 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.017 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 33 0.030 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 32 0.039 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.091 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.12 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.16 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.28 SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 28 0.64 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.9 SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 26 3.4 SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 3.4 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 4.5 SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 4.5 SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 5.9 SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.9 SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 7.9 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 141 bits (341), Expect = 6e-35 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 223 DKLKAERE 246 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 119 bits (286), Expect = 3e-28 Identities = 53/62 (85%), Positives = 57/62 (91%) Frame = +3 Query: 249 GYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 428 G TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129 Query: 429 NG 434 +G Sbjct: 130 DG 131 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 141 bits (341), Expect = 6e-35 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 223 DKLKAERE 246 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 119 bits (287), Expect = 2e-28 Identities = 54/62 (87%), Positives = 57/62 (91%) Frame = +3 Query: 249 GYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 428 G TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISK 129 Query: 429 NG 434 +G Sbjct: 130 DG 131 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 141 bits (341), Expect = 6e-35 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 223 DKLKAERE 246 DKLKAERE Sbjct: 61 DKLKAERE 68 Score = 119 bits (286), Expect = 3e-28 Identities = 53/62 (85%), Positives = 57/62 (91%) Frame = +3 Query: 249 GYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 428 G TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129 Query: 429 NG 434 +G Sbjct: 130 DG 131 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 80.6 bits (190), Expect = 1e-16 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = +1 Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234 K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295 Query: 235 AERE 246 ERE Sbjct: 296 EERE 299 Score = 67.7 bits (158), Expect = 9e-13 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Frame = +3 Query: 249 GYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 428 G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + Sbjct: 301 GKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFER 360 Query: 429 NG-SNP*ACLAR 461 G + A LAR Sbjct: 361 GGQTREHAVLAR 372 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 72.5 bits (170), Expect = 3e-14 Identities = 31/63 (49%), Positives = 44/63 (69%) Frame = +1 Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234 K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234 Query: 235 AER 243 ER Sbjct: 235 EER 237 Score = 66.1 bits (154), Expect = 3e-12 Identities = 32/62 (51%), Positives = 38/62 (61%) Frame = +3 Query: 249 GYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 428 G T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G + Sbjct: 240 GVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLE 299 Query: 429 NG 434 NG Sbjct: 300 NG 301 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 53.2 bits (122), Expect = 2e-08 Identities = 23/53 (43%), Positives = 35/53 (66%) Frame = +3 Query: 249 GYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 407 G TI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ Sbjct: 101 GITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153 Score = 35.1 bits (77), Expect = 0.006 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +1 Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 135 ++K H+NI IGHVD GK+T T I KC Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.004 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 0.84 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 35.5 bits (78), Expect = 0.004 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138 MGK N+ VI HVD GKST T L+ K G Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44 Score = 27.9 bits (59), Expect = 0.84 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 33.5 bits (73), Expect = 0.017 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404 F+ ++T +D PGH F G + AD VL+VA G Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 32.7 bits (71), Expect = 0.030 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 249 GYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404 G TI+ A F + +ID PGH DF + + D AV I+ G Sbjct: 78 GITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129 Score = 28.7 bits (61), Expect = 0.48 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138 N+ +I H+D+GK+T T ++Y G Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 32.3 bits (70), Expect = 0.039 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +3 Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404 FE S Y + IID PGH DF + D AVL++ A +G Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSG 181 Score = 29.1 bits (62), Expect = 0.37 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144 NI + H+DSGK+T T ++Y G I Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 31.1 bits (67), Expect = 0.091 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 392 +V+ +D PGH + M+ G + D A+L++A Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140 Score = 25.0 bits (52), Expect = 5.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 Query: 37 PKMGKEKTHINIVVIGHVDSGKST 108 P + + INI IGHV GKST Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 30.7 bits (66), Expect = 0.12 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = +3 Query: 270 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404 ++ + Y + +ID PGH DF ++ + + +L+V A G Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160 Score = 24.6 bits (51), Expect = 7.9 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 150 N VI H+D GKST + ++ G I++ Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINE 87 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 30.3 bits (65), Expect = 0.16 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404 Y + +ID+PGH DF + + + D A ++V A G Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 29.5 bits (63), Expect = 0.28 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIV 389 IID PGH F GTS + A+L++ Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosaccharomyces pombe|chr 1|||Manual Length = 559 Score = 28.3 bits (60), Expect = 0.64 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -2 Query: 344 VLDEISVSRSINDGNIVLASFELPESNIDCIPSSRSAFSLSN 219 V D + SIN N++ A + +P + + +PSS +F L N Sbjct: 87 VYDTLQELMSINSINMLYAFYYMPSGDEEKLPSSWKSFLLEN 128 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 26.6 bits (56), Expect = 1.9 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 309 IDAPGHRDFIKNMITGTSQADCAVLIV 389 ID PGH DF+ + + +D VL+V Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240 >SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces pombe|chr 3|||Manual Length = 384 Score = 25.8 bits (54), Expect = 3.4 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -2 Query: 317 SINDGNIVLASFELPESNIDCIPSSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 138 S++ + L S+ P S + + A ++YL+ PL S S S + +R SIP Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364 >SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosaccharomyces pombe|chr 1|||Manual Length = 468 Score = 25.8 bits (54), Expect = 3.4 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = -2 Query: 383 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCIPSSRSAFSLSNTQAYL 204 EH+A+ L S +L IS R N GNI L S + + S + L+ + A Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61 Query: 203 KDPLPI 186 K LPI Sbjct: 62 KALLPI 67 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 25.4 bits (53), Expect = 4.5 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 258 IDIALWKFETSKYYV--TIIDAPGHRDFIKN 344 I+I + E +++ T+ID PG DFI N Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pombe|chr 2|||Manual Length = 662 Score = 25.4 bits (53), Expect = 4.5 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -3 Query: 229 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 101 V +PK I I++ F P S S C+Y S D W T Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73 >SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 311 Score = 25.0 bits (52), Expect = 5.9 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -3 Query: 184 PGPPSRTSRWYVCQYHHIC 128 P PP +T + Y QY+ +C Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26 >SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 96 Score = 24.6 bits (51), Expect = 7.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 Query: 353 CDHVLDEISVSRSINDGNIVLASFEL 276 CDH+L IS SR G + FEL Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48 >SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 4196 Score = 24.6 bits (51), Expect = 7.9 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 352 QEPLRLIALCSS*LPVPVNSKLVSLRTVQTREHALLGFHP 471 ++ + L+ +C L VN L+S++T R L+GF P Sbjct: 988 EDSIYLLDMC---LQSVVNIPLLSIKTTAQRNCTLIGFFP 1024 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,925,384 Number of Sequences: 5004 Number of extensions: 37747 Number of successful extensions: 142 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 142 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 184476110 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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