Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30064
(858 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 24 2.1
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 24 2.1
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 23 2.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.3
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 6.3
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 8.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 8.3
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 8.3
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 680 LHFIKKFGNHGKWIYTHFFQHYSTT 606
+HF + F + G +Y +FF ++T
Sbjct: 461 IHFAQLFADRGMKVYYYFFTQRTST 485
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 680 LHFIKKFGNHGKWIYTHFFQHYSTT 606
+HF + F + G +Y +FF ++T
Sbjct: 461 IHFAQLFADRGMKVYYYFFTQRTST 485
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 819 LKNLKYKIWKFKPRPPGNTSGR 754
+ N+K K W +PR P T+ +
Sbjct: 37 VNNIKRKRWWSRPREPAQTTSK 58
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 163 IPPNAYKFRPPLNPRF 178
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 163 IPPNAYKFRPPLNPRF 178
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 163 IPPNAYKFRPPLNPRF 178
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 163 IPPNAYKFRPPLNPRF 178
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 163 IPPNAYKFRPPLNPRF 178
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 163 IPPNAYKFRPPLNPRF 178
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 163 IPPNAYKFRPPLNPRF 178
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ YKFR + PRF
Sbjct: 166 IPPNAYKFRPPLNPRF 181
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 98 NYLYRLLTKANINY*KTNCFTQ 163
N Y ++ N+NY T FTQ
Sbjct: 261 NLYYSAMSSHNLNYVNTKQFTQ 282
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 548 VGPSNYKFRE*IKPRF 595
+ P+ Y+FR + PRF
Sbjct: 162 ISPNAYRFRPPLNPRF 177
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 188 KDHKHRITFSLSNKKRLFRTHFRRYLIQLLYNV 286
+ + +I SLSNK +++ Y +L YN+
Sbjct: 308 RSKESKIISSLSNKTIHNNNNYKNYNKKLYYNI 340
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 684 GIHVGFQLKLIFQPPKSPFNDLGPY 758
GIH GF +I PP L P+
Sbjct: 83 GIHTGFGGSIITIPPTRKLPPLHPH 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,549
Number of Sequences: 438
Number of extensions: 5058
Number of successful extensions: 78
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -