Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30060
(824 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 115 3e-26
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 114 6e-26
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 107 9e-24
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 101 6e-22
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 100 2e-21
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 95 5e-20
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 95 5e-20
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 95 5e-20
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 94 1e-19
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 94 1e-19
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 31 0.70
At2g23140.1 68415.m02763 armadillo/beta-catenin repeat family pr... 30 1.6
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At1g13050.1 68414.m01513 expressed protein 30 1.6
At3g46840.1 68416.m05084 subtilase family protein contains simil... 29 2.8
At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical t... 29 3.7
At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical t... 29 3.7
At3g46850.1 68416.m05085 subtilase family protein contains simil... 29 5.0
At1g17380.1 68414.m02120 expressed protein 29 5.0
At2g43970.2 68415.m05468 La domain-containing protein contains P... 28 6.5
At2g43970.1 68415.m05467 La domain-containing protein contains P... 28 6.5
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 28 6.5
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 6.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 8.7
At1g58220.1 68414.m06612 myb family transcription factor contain... 28 8.7
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 115 bits (277), Expect = 3e-26
Identities = 60/121 (49%), Positives = 73/121 (60%)
Frame = +2
Query: 278 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 457
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKGVV L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKTTDGKPFVELLMENGVIPGIKVDKGVVDLAGTNGETTTQGLDSLGA 128
Query: 458 RCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRLLKPEVF 637
RC +Y K G FAKWR + AT P ++ LAR + + +++PEV
Sbjct: 129 RCQEYYKAGARFAKWRAVLKIGATEPSELSIQENAKGLARYAI-ICQENGLVPIVEPEVL 187
Query: 638 T 640
T
Sbjct: 188 T 188
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3
Query: 99 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
+EL K A+ I P KGILAADESTGT+GKR I VEN E NR+ R+LLF+
Sbjct: 10 DELIKTAKYIATPGKGILAADESTGTIGKRFASINVENIESNRQALRELLFT 61
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 114 bits (275), Expect = 6e-26
Identities = 59/121 (48%), Positives = 73/121 (60%)
Frame = +2
Query: 278 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 457
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKG+V L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGA 128
Query: 458 RCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRLLKPEVF 637
RC QY + G FAKWR + AT P ++ LAR + + +++PEV
Sbjct: 129 RCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVLARYAI-ICQENGLVPIVEPEVL 187
Query: 638 T 640
T
Sbjct: 188 T 188
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +3
Query: 96 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
++EL K A+ I P +GILAADEST T+GKR I VENTE NR+ YR+LLF+
Sbjct: 9 EDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFT 61
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 107 bits (257), Expect = 9e-24
Identities = 51/100 (51%), Positives = 62/100 (62%)
Frame = +2
Query: 278 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 457
+SGVILF ETLYQK+ DGTP V +L+ G++PGIKVDKG V L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKSSDGTPFVDMLKSAGVLPGIKVDKGTVELAGTNGETTTQGLDGLGD 128
Query: 458 RCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLAR 577
RC +Y + G FAKWR + P + LAR
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGVNEPSQLAIHENAYGLAR 168
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = +3
Query: 84 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LLF+
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVESNRRALRELLFT 61
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 101 bits (242), Expect = 6e-22
Identities = 49/100 (49%), Positives = 62/100 (62%)
Frame = +2
Query: 278 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 457
+SGVILF ETLYQK+ DG V +L++ G++PGIKVDKG V L G++ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKSSDGKLFVDILKEGGVLPGIKVDKGTVELAGTDGETTTQGLDGLGD 128
Query: 458 RCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLAR 577
RC +Y + G FAKWR + P + LAR
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGENEPSEHSIHENAYGLAR 168
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = +3
Query: 84 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LLF+
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVETNRRNLRELLFT 61
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 99.5 bits (237), Expect = 2e-21
Identities = 55/123 (44%), Positives = 72/123 (58%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 445
L + ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS DE QGLD
Sbjct: 109 LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLD 168
Query: 446 DLAQRCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRLLK 625
LA R A Y + G FAKWR S P ++ LAR +S+ + +++
Sbjct: 169 GLASRTAAYYQQGARFAKWRTV-VSIPNGPSALAVKEAAWGLARYA-AISQDSGLVPIVE 226
Query: 626 PEV 634
PE+
Sbjct: 227 PEI 229
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +3
Query: 99 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
+EL K A+ I +P GI+A DES T GKRL IG+ENTE NR+ YR LL S
Sbjct: 54 DELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVS 105
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 95.1 bits (226), Expect = 5e-20
Identities = 51/123 (41%), Positives = 72/123 (58%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 445
L + +SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD
Sbjct: 108 LGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLD 167
Query: 446 DLAQRCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRLLK 625
L+ R A Y + G FAKWR S P ++ LAR +S+ + +++
Sbjct: 168 GLSSRTAAYYQQGARFAKWRTV-VSIPNGPSALAVKEAAWGLARYA-AISQDSGLVPIVE 225
Query: 626 PEV 634
PE+
Sbjct: 226 PEI 228
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +3
Query: 99 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL S
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVS 104
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 95.1 bits (226), Expect = 5e-20
Identities = 51/123 (41%), Positives = 72/123 (58%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 445
L + +SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD
Sbjct: 108 LGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLD 167
Query: 446 DLAQRCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRLLK 625
L+ R A Y + G FAKWR S P ++ LAR +S+ + +++
Sbjct: 168 GLSSRTAAYYQQGARFAKWRTV-VSIPNGPSALAVKEAAWGLARYA-AISQDSGLVPIVE 225
Query: 626 PEV 634
PE+
Sbjct: 226 PEI 228
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +3
Query: 99 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL S
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVS 104
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 95.1 bits (226), Expect = 5e-20
Identities = 46/80 (57%), Positives = 51/80 (63%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 445
L + ISG ILF ETLYQ DG V L I+PGIKVDKG+ PL GS +E QGLD
Sbjct: 101 LGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLD 160
Query: 446 DLAQRCAQYKKDGCHFAKWR 505
LA R A+Y K G FAKWR
Sbjct: 161 GLASRSAEYYKQGARFAKWR 180
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +3
Query: 99 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
+EL K A++I +P +GILA DES T GKRL IG++NTE+NR+ YRQLL +
Sbjct: 46 DELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLT 97
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/100 (46%), Positives = 58/100 (58%)
Frame = +2
Query: 278 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 457
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 69 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGD 128
Query: 458 RCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLAR 577
RC +Y + G FAKWR + P + LAR
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLAR 168
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = +3
Query: 99 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
+EL A I P KGILAADESTGT+GKR I VEN E NRR R+LLF+
Sbjct: 10 DELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELLFT 61
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/100 (46%), Positives = 58/100 (58%)
Frame = +2
Query: 278 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 457
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 103 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGD 162
Query: 458 RCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLAR 577
RC +Y + G FAKWR + P + LAR
Sbjct: 163 RCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLAR 202
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = +3
Query: 102 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
EL A I P KGILAADESTGT+GKR I VEN E NRR R+LLF+
Sbjct: 45 ELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELLFT 95
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 31.5 bits (68), Expect = 0.70
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +1
Query: 388 QGCRPAVRIGRRMHHPGSGRPRPALR-PVQEGRL---PLRQVALLLKIGRNTPSYQAIQE 555
QG PA G PG G LR P +G + P++ V + +GRNTP + Q
Sbjct: 814 QGSLPAGYGGNVGFRPGQGGNSGVLRNPRMQGPIISRPMQPVGPMGGMGRNTPDLERWQR 873
Query: 556 NANVSRPLTLPSVRANAFVPIVEARSLYLMGEARTLEPRPRKVNLKVVLGR 708
+N + PS V + +A Y +G E + ++ LK +L +
Sbjct: 874 GSNFQQKGLFPSPHTPMQV-MHKAERKYQVGTIAD-EEQAKQRQLKSILNK 922
>At2g23140.1 68415.m02763 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 811
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 611 TNALALTDGSVSGRETL--AFSWIAWYEGVLRPIFSSNATWRSGSRPSCTGRSAGRGRP 441
T+++ T VS R+ + W A +P FSS AT R G+ PS + G P
Sbjct: 323 TDSIPSTGADVSARKVSNKSHDWDASSSETGKPSFSSRATEREGASPSRPASALGASSP 381
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 364 HHPRHQGRQGC----RPAVRIGRRMHHPGSGRPRPALRPVQ 474
HH + GC RP R+ R HHP R RP +R VQ
Sbjct: 44 HHNQRHDSDGCDPLRRPTPRLRRFFHHPIQERSRP-IRDVQ 83
>At1g13050.1 68414.m01513 expressed protein
Length = 317
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +1
Query: 427 HHPGSGRPRPALRPVQEGRLPLRQVALLLKIGRNTPSYQAIQENANVSRPLTLPSVRANA 606
H+P S RP L P +E R P R R P+ A Q+ ++P+TLP+ A
Sbjct: 85 HNPNSARPLQ-LSP-EEQRPPHRGYGSEPTPWRRAPTRPAYQQGPKRTKPMTLPATICCA 142
Query: 607 FVPIV 621
+ IV
Sbjct: 143 ILLIV 147
>At3g46840.1 68416.m05084 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo];
Length = 738
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -1
Query: 740 VVRLRGLFKTGRPRTTFKLTFLGRGSKVRASPIR*RLRASTIGTNALALTDGSVSGRETL 561
V+ R + GRP T+K +G KV+ P L++ + G+ E L
Sbjct: 655 VIFRRTVTNVGRPNATYKAKVVGSKLKVKVVPAVLSLKSLYEKKSFTVTASGAGPKAENL 714
Query: 560 AFSWIAWYEGV 528
+ + W +GV
Sbjct: 715 VSAQLIWSDGV 725
>At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 463 RPVQEGRLPLRQVALLLKIGRNTPSYQAIQENANVSRPLTLPSVRANAFVP 615
R E L LR+ A+ +G S + + E+ + P+T+P+ + F P
Sbjct: 894 RKEAEKELKLREQAIATSLGTPPSSVKHVAEDLSTPSPMTVPAQKQLKFTP 944
>At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 463 RPVQEGRLPLRQVALLLKIGRNTPSYQAIQENANVSRPLTLPSVRANAFVP 615
R E L LR+ A+ +G S + + E+ + P+T+P+ + F P
Sbjct: 894 RKEAEKELKLREQAIATSLGTPPSSVKHVAEDLSTPSPMTVPAQKQLKFTP 944
>At3g46850.1 68416.m05085 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo];
Length = 736
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = -1
Query: 728 RGLFKTGRPRTTFKLTFLGRGSKVRASPIR*RLRASTIGTNALALTDGSVSGRETLAFSW 549
R + GRP T+K +G KV+ P L++ + G+ E L +
Sbjct: 659 RTVTNVGRPNATYKAKVVGSKLKVKVVPAVLSLKSLYEKKSFTVTVSGAGPKAENLVSAQ 718
Query: 548 IAWYEGV 528
+ W +GV
Sbjct: 719 LIWSDGV 725
>At1g17380.1 68414.m02120 expressed protein
Length = 274
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 179 GKAFAGHRRGEHRGEPSSLSPTPIQPDAVLSENISG 286
GK A H+ G +GEPS+ S ++ A LSE+ G
Sbjct: 60 GKQNAMHKAGHSKGEPSTSSGGKVKDVADLSESQPG 95
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 352 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 456
G HH H + G +P+ M PG G+ +P
Sbjct: 470 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 504
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 352 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 456
G HH H + G +P+ M PG G+ +P
Sbjct: 486 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 520
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 110 EDRSSNCSSRKGYPRR*RIHRYNGKAFAGHRRGEHRGEPSSLSPTPIQPDAVLSENISG 286
+D S+ P +IH Y+ + A ++G HR SL P + V ISG
Sbjct: 14 DDEEEALSAMSSVPPPRKIHSYSHQLRATGQKGHHRQRQHSLDDIPKITEIVSGCGISG 72
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 370 PRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLR 495
P + GCRP +RI R + SG + + + + PLR
Sbjct: 192 PNFDSQHGCRPIIRIFGRNYSSKSGLSTEMVYSMSDKKKPLR 233
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 614 GTNALALTDGSVSGRETLAF-SWIAWYEGVLRPIFSSNATWRSGSRPSCTGRSAGRGRPD 438
GT+A+ + GS+ + A+ S + ++E V R I +SN+ + T S+G +
Sbjct: 1610 GTSAVQVLSGSILNDQAAAYVSAVEYFERVARSI-ASNSQVSTKPTDMVTEPSSGIPAAE 1668
Query: 437 PGWCIRLPIRT 405
P R+P T
Sbjct: 1669 PSTMTRVPSST 1679
>At1g58220.1 68414.m06612 myb family transcription factor contains
Pfam profile: PF00249: Myb-like DNA-binding domain
Length = 834
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -3
Query: 549 DSLVRGGVAADLQQQRHLAKWQPSFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMP 373
DS V + ++ H +PS YW+ R + P + +++ ++G S+L P
Sbjct: 133 DSTVEAPLTINIPYSLHRGPQEPSDSYWSSRGMNITFPVFLPKAAEGHNGNGLASSLAP 191
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,779,618
Number of Sequences: 28952
Number of extensions: 467370
Number of successful extensions: 1271
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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