Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30049
(727 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 113 6e-24
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 109 7e-23
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 107 4e-22
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 106 6e-22
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 89 8e-17
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 89 1e-16
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 86 1e-15
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 74 3e-12
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 74 4e-12
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 66 6e-10
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 66 8e-10
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 66 1e-09
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 65 1e-09
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 64 4e-09
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 64 4e-09
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 62 2e-08
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 62 2e-08
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 61 2e-08
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 61 2e-08
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 61 3e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 60 4e-08
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 59 1e-07
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 59 1e-07
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 59 1e-07
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 58 2e-07
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 58 2e-07
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 58 3e-07
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 57 4e-07
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 57 4e-07
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 57 4e-07
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 57 4e-07
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 57 5e-07
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 56 7e-07
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 56 7e-07
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 56 7e-07
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 56 9e-07
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 56 1e-06
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 56 1e-06
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 55 2e-06
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 55 2e-06
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 55 2e-06
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 55 2e-06
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 55 2e-06
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 55 2e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 54 3e-06
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 54 3e-06
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 54 4e-06
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 54 4e-06
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 54 4e-06
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 54 5e-06
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 54 5e-06
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 54 5e-06
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 5e-06
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 53 6e-06
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 53 6e-06
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 53 6e-06
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 53 8e-06
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 8e-06
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 8e-06
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 8e-06
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 53 8e-06
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 53 8e-06
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 52 1e-05
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 52 1e-05
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 1e-05
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 52 1e-05
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 52 1e-05
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 52 1e-05
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 52 1e-05
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 52 1e-05
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 52 1e-05
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 52 2e-05
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 52 2e-05
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 52 2e-05
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 52 2e-05
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 52 2e-05
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 51 3e-05
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 51 3e-05
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 51 3e-05
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 51 3e-05
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 51 3e-05
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 51 3e-05
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 51 3e-05
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 3e-05
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 51 3e-05
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 51 3e-05
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 51 3e-05
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 51 3e-05
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 51 3e-05
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 51 3e-05
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 4e-05
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 50 4e-05
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 50 4e-05
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 50 4e-05
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 50 6e-05
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 50 6e-05
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 50 6e-05
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 50 6e-05
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyc... 50 6e-05
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 50 6e-05
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 50 6e-05
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 50 6e-05
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 8e-05
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 50 8e-05
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 50 8e-05
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 50 8e-05
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 50 8e-05
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 50 8e-05
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 50 8e-05
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 50 8e-05
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 50 8e-05
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 50 8e-05
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 50 8e-05
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 50 8e-05
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 50 8e-05
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 49 1e-04
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 49 1e-04
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 49 1e-04
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 49 1e-04
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 49 1e-04
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 49 1e-04
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 49 1e-04
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 49 1e-04
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 49 1e-04
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 49 1e-04
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 49 1e-04
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 49 1e-04
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 1e-04
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 49 1e-04
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 48 2e-04
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 48 2e-04
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 48 2e-04
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 48 2e-04
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 48 2e-04
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 48 2e-04
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 48 2e-04
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 48 2e-04
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 48 2e-04
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 48 2e-04
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 48 2e-04
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 48 2e-04
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 48 2e-04
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 48 2e-04
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 48 3e-04
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 48 3e-04
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 3e-04
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 48 3e-04
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 48 3e-04
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 48 3e-04
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 48 3e-04
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 48 3e-04
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 48 3e-04
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 3e-04
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 48 3e-04
UniRef50_Q8GUG7 Cluster: DEAD-box ATP-dependent RNA helicase 50;... 48 3e-04
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 48 3e-04
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 48 3e-04
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 48 3e-04
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 47 4e-04
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 47 4e-04
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 47 4e-04
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 47 4e-04
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 47 4e-04
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 47 4e-04
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 47 4e-04
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 47 4e-04
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 47 4e-04
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 47 4e-04
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 47 4e-04
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 47 4e-04
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 47 4e-04
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 47 5e-04
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 47 5e-04
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 47 5e-04
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 47 5e-04
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 47 5e-04
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 47 5e-04
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 47 5e-04
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 47 5e-04
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 47 5e-04
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 47 5e-04
UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative... 47 5e-04
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 47 5e-04
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 46 7e-04
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 46 7e-04
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 46 7e-04
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 46 7e-04
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 46 7e-04
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 46 7e-04
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 46 7e-04
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 46 7e-04
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 46 7e-04
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 46 7e-04
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 46 7e-04
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 46 7e-04
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 46 7e-04
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 7e-04
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 46 7e-04
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 46 7e-04
UniRef50_Q502G7 Cluster: LOC553462 protein; n=3; Danio rerio|Rep... 46 0.001
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 46 0.001
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 46 0.001
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 46 0.001
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 46 0.001
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 46 0.001
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 46 0.001
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 46 0.001
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 46 0.001
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 46 0.001
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 46 0.001
UniRef50_A5K8S1 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 46 0.001
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 46 0.001
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 46 0.001
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 46 0.001
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 46 0.001
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 46 0.001
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 46 0.001
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 0.001
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 46 0.001
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 46 0.001
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 46 0.001
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 46 0.001
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 46 0.001
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 46 0.001
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 46 0.001
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 46 0.001
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 46 0.001
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 46 0.001
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 46 0.001
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 45 0.002
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 45 0.002
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 45 0.002
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 45 0.002
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 45 0.002
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 45 0.002
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 45 0.002
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 45 0.002
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 45 0.002
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 45 0.002
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 45 0.002
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 45 0.002
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 45 0.002
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 45 0.002
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 45 0.002
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 45 0.002
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 45 0.002
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 45 0.002
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 45 0.002
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 45 0.002
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 45 0.002
UniRef50_Q4MZS9 Cluster: ATP-dependent RNA helicase, putative; n... 45 0.002
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 45 0.002
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 45 0.002
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 45 0.002
UniRef50_Q0DVX2 Cluster: DEAD-box ATP-dependent RNA helicase 50;... 45 0.002
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 45 0.002
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 45 0.002
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 45 0.002
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 45 0.002
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 44 0.003
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.003
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.003
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.003
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 44 0.003
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 44 0.003
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 44 0.003
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 44 0.003
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 44 0.003
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.003
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 44 0.003
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 44 0.003
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 44 0.003
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 44 0.003
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 44 0.003
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 44 0.004
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 44 0.004
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 44 0.004
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 44 0.004
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 44 0.004
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 44 0.004
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 44 0.004
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.004
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 44 0.004
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 44 0.004
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 44 0.004
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 44 0.004
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 44 0.004
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 44 0.004
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 44 0.004
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 44 0.004
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 44 0.004
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 44 0.004
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 44 0.004
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.004
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 44 0.005
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 44 0.005
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 44 0.005
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 44 0.005
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 44 0.005
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.005
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 44 0.005
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 44 0.005
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 44 0.005
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.005
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 44 0.005
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 44 0.005
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 44 0.005
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 44 0.005
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 44 0.005
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 44 0.005
UniRef50_A0E4U1 Cluster: Chromosome undetermined scaffold_79, wh... 44 0.005
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 44 0.005
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 44 0.005
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.005
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.005
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 43 0.007
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 43 0.007
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 43 0.007
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 43 0.007
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 43 0.007
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.007
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 43 0.007
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 43 0.007
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 43 0.007
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 43 0.007
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 43 0.007
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 43 0.007
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 43 0.009
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 43 0.009
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 43 0.009
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 43 0.009
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 43 0.009
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 43 0.009
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.009
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 43 0.009
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 43 0.009
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.009
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 43 0.009
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 43 0.009
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 43 0.009
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 43 0.009
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 43 0.009
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 43 0.009
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 43 0.009
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 43 0.009
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 42 0.012
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 42 0.012
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 42 0.012
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 42 0.012
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 42 0.012
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 42 0.012
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 42 0.012
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.012
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 42 0.012
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 42 0.012
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 42 0.012
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 42 0.012
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 42 0.012
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 42 0.012
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 42 0.012
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 42 0.012
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 42 0.012
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 42 0.012
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 42 0.012
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 42 0.012
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 42 0.012
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 42 0.012
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 42 0.012
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 42 0.016
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 42 0.016
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 42 0.016
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.016
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 42 0.016
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 42 0.016
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.016
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.016
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.016
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 42 0.016
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 42 0.016
UniRef50_Q1E7Y4 Cluster: ATP-dependent RNA helicase MAK5; n=11; ... 42 0.016
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 42 0.016
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 42 0.016
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 42 0.021
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 42 0.021
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 42 0.021
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 42 0.021
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 42 0.021
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 42 0.021
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 42 0.021
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 42 0.021
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 42 0.021
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 42 0.021
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 42 0.021
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 42 0.021
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 42 0.021
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 42 0.021
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.021
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 42 0.021
UniRef50_Q5UQD1 Cluster: Putative ATP-dependent RNA helicase R45... 42 0.021
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 42 0.021
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 42 0.021
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 42 0.021
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 42 0.021
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 42 0.021
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 42 0.021
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 42 0.021
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 41 0.027
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 41 0.027
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 41 0.027
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 41 0.027
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 41 0.027
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 41 0.027
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.027
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.027
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 41 0.027
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 41 0.027
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 41 0.027
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 41 0.027
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 41 0.027
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 41 0.027
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 41 0.027
UniRef50_A7ANF1 Cluster: DEAD/DEAH box domain containing protein... 41 0.027
UniRef50_A5K9E1 Cluster: DEAD-box subfamily ATP-dependant helica... 41 0.027
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 41 0.027
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 41 0.027
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 41 0.027
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 41 0.027
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 41 0.027
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 41 0.027
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 41 0.036
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 41 0.036
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 41 0.036
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 41 0.036
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 41 0.036
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 41 0.036
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 41 0.036
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 41 0.036
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 41 0.036
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.036
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 41 0.036
UniRef50_Q00X54 Cluster: RNA Helicase; n=2; Ostreococcus|Rep: RN... 41 0.036
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 41 0.036
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 41 0.036
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 41 0.036
UniRef50_A5KAD4 Cluster: Helicase, putative; n=1; Plasmodium viv... 41 0.036
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 41 0.036
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 41 0.036
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 41 0.036
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 41 0.036
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 41 0.036
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 41 0.036
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 41 0.036
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 41 0.036
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 41 0.036
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 41 0.036
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 40 0.047
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.047
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 40 0.047
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 40 0.047
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 40 0.047
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 40 0.047
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 113 bits (271), Expect = 6e-24
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
G + T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G DVIAQAQSGT
Sbjct: 19 GVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGT 78
Query: 252 GK 257
GK
Sbjct: 79 GK 80
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 367
KTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 80 KTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 109 bits (262), Expect = 7e-23
Identities = 48/62 (77%), Positives = 57/62 (91%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
G + ++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+PCI+G DVIAQAQSGT
Sbjct: 22 GVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGT 81
Query: 252 GK 257
GK
Sbjct: 82 GK 83
Score = 107 bits (256), Expect = 4e-22
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
Frame = +2
Query: 17 NGPSKDQG-SYDGPPGMDPGTLAHRLGSSCRNLR*HEPQRRIVERHIRLWF*KTFCNP-A 190
+G S D + GP GMDP + + S+ + + + E +R + F P A
Sbjct: 2 SGGSADYNREHGGPEGMDPDGV---IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSA 58
Query: 191 TRNNALHPRTRCY---RSSPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 361
+ A+ P + Y + KTATF+ISILQQ++ +E QAL+LAPTRELAQQIQ
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 362 KVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
KV++ALGD++ A CHACIGGTNVR ++++L+
Sbjct: 119 KVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 107 bits (256), Expect = 4e-22
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
G + ++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+PCI+G DVIAQAQSGT
Sbjct: 24 GIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGT 83
Query: 252 GK 257
GK
Sbjct: 84 GK 85
Score = 55.2 bits (127), Expect = 2e-06
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Frame = +2
Query: 26 SKDQGSYDGPPGMDPGTLAHRLGSSCRNLR*HEPQRRIVERHIRLWF*KTFCNP-ATRNN 202
SKD G GP GM+P + + S+ + + + E +R + F P A +
Sbjct: 11 SKDHG---GPDGMEPDGI---IESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQR 64
Query: 203 ALHPRTRCY---RSSPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQ 355
A+ P + Y + KTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 65 AIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 106 bits (254), Expect = 6e-22
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFSIS+LQ +D +RE QALILAPTRELA QIQK ++ALGD++N +CHACIGGTNV
Sbjct: 88 KTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVG 147
Query: 434 EDIRQLE 454
EDIR+L+
Sbjct: 148 EDIRKLD 154
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGK
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 88
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/82 (53%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Frame = +3
Query: 84 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK-- 257
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQSGTGK
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 258 -LLLSLYRFY---NKSIQAFVN 311
L++Y+ N+ +QA ++
Sbjct: 329 MFALTVYQMVDTSNREVQALIS 350
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 406
KT+ F++++ Q +DTS RE QALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 326 KTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 89.4 bits (212), Expect = 8e-17
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +3
Query: 78 LHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT TF+I LQ+ID + R+ Q +ILAP RELA+QI VV +G +LN + CIGGT+ +
Sbjct: 106 KTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQ 165
Query: 434 E 436
E
Sbjct: 166 E 166
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGK
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 88
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFS+S+LQ +D IQ ++ALGD++N +CHACIGGTNV
Sbjct: 88 KTATFSVSVLQCLD--------------------IQG-LLALGDYMNVQCHACIGGTNVG 126
Query: 434 EDIRQLE 454
EDIR+L+
Sbjct: 127 EDIRKLD 133
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/52 (75%), Positives = 47/52 (90%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGK
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGK 71
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA 376
KTAT+ I+ LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 71 KTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 406
KTATF ILQQ++ + +CQAL+LAPTRELAQQI+KV+ ALGDHLN K +
Sbjct: 62 KTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRALGDHLNVKIY 112
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +3
Query: 117 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D N+ L + G EKPSAIQQ+ I+P +G DVI QAQSGTGK
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGK 62
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 120 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
M LKE LLRGIYAYG EKPSAIQQ+ I+P +G DVI QAQSGTGK
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGK 46
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +3
Query: 78 LHTDWDQV--VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
L +D Q+ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQSGT
Sbjct: 27 LRSDSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGT 86
Query: 252 GK 257
GK
Sbjct: 87 GK 88
Score = 37.1 bits (82), Expect = 0.44
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F+++ LQ D S Q L+LA TRE+A Q LG + A+ GG+ +
Sbjct: 88 KTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIA 147
Query: 434 EDIRQLE 454
D LE
Sbjct: 148 ADKVALE 154
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MDLREWTL-GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 218
M L EWTL G + +DW+++V++FDDMNL E LL GIYAYGFEK CI+G
Sbjct: 1 MALMEWTLMGVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEKAICHSVTCNSSCIKG 58
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK---LLLS 269
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q TGK + LS
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 270 LYRFYNKSIQ 299
+ ++ S++
Sbjct: 80 VLSIFDLSVK 89
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT S+S+L D S+++ Q LIL TR+L ++ +++ALG LN HAC G +++
Sbjct: 72 KTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNSIQ 131
Query: 434 EDI 442
+DI
Sbjct: 132 DDI 134
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGK
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGK 96
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I L+++ + + QALI+ PTRELA Q +VV LG H C GGTN+R
Sbjct: 96 KTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLR 155
Query: 434 EDIRQL 451
+DI +L
Sbjct: 156 DDILRL 161
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/61 (49%), Positives = 39/61 (63%)
Frame = +2
Query: 257 TATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 436
T T ILQ++D + ECQAL+L PT +LA + Q V+ LG L+AK HA GGT+ E
Sbjct: 97 TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHE 156
Query: 437 D 439
D
Sbjct: 157 D 157
Score = 36.3 bits (80), Expect = 0.77
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
+V T + E L+ +KPSA+ QR I+P G D+I Q+ GT
Sbjct: 46 IVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT 96
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
V E F DM L +ELL+ IY GFEKPS IQ+ AI ++G +V+ Q++SGTGK +
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTI 103
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+D L+ ELL GIY GFE+PS IQ++AI + GRD++A+A++GTGK
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGK 86
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA+F I L +I+TS+ QALIL PTRELA Q +V LG H+ N + GGT +
Sbjct: 86 KTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTL 145
Query: 431 REDIRQLE 454
R+DI +L+
Sbjct: 146 RDDILRLQ 153
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGK
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGK 55
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 391
KTA F + +LQ+ID + R QAL+L PTRELA Q+ + AL HL
Sbjct: 55 KTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHL 100
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/53 (54%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGK 257
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGK
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGK 121
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 400
KTA F++ +L +D SI QA+ ++PT+ELA Q +V+ +G N K
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I +++IAQ+QSGTGK
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGK 128
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 367
KTATF +++L +I T + CQ L +APTRELA QI+ V
Sbjct: 128 KTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGK 257
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QSGTGK
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGK 149
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 209 HPRTRCYRSSPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 382
HP S KTA F +++L +++ Q L LAPT ELA Q +VV +G
Sbjct: 134 HPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMG 191
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKLLLSLY 275
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGK L
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 276 RFYNK 290
+K
Sbjct: 107 TMLSK 111
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 394
KTATF +++L +ID + CQ L +APTREL QI +V I + +N
Sbjct: 100 KTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMN 146
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGK
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGK 54
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F +I+ D S ++ +ALILAPTRELA Q+ + ++ LG H GG
Sbjct: 54 KTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQP 113
Query: 428 VREDIRQLE 454
+ IR L+
Sbjct: 114 IDRQIRALK 122
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGK 139
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
K+ + I +L++ID QAL+L PTRELA Q+ ++ I + HL K A GGTN+
Sbjct: 139 KSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNL 198
Query: 431 REDIRQLE 454
R+DI +L+
Sbjct: 199 RDDIMRLD 206
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGK 146
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 367
K+ + I +L+++D QA+++ PTRELA Q+ ++
Sbjct: 146 KSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D NL+EE+L+ I + GFE PS +Q AI P ++ +DVI QA+SG GK
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGK 178
Score = 37.5 bits (83), Expect = 0.33
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +2
Query: 254 KTATFSISILQQIDTSI--RECQALILAPTRELAQQIQK----VVIALGDHLNAKCHACI 415
KTA F +S+L ID + QAL+L T ELA QI K I L D + K I
Sbjct: 178 KTAVFVLSLLHMIDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPD-IKDKILCAI 236
Query: 416 GGTNVREDIRQLE 454
GG V +R L+
Sbjct: 237 GGVTVSLHVRALK 249
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYN 287
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGK + + N
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 288 K 290
+
Sbjct: 99 Q 99
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/67 (38%), Positives = 33/67 (49%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F +S+L Q+ + L+L TRELA QI+ LG N K A GG
Sbjct: 88 KTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEES 147
Query: 434 EDIRQLE 454
DI L+
Sbjct: 148 VDIHTLK 154
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGK
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGK 56
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F + I++++ R QAL+L PTRELA Q+ + + +G H K A GG ++
Sbjct: 56 KTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIE 115
Query: 434 EDIRQL 451
IR L
Sbjct: 116 RQIRSL 121
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +3
Query: 87 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGK 257
+W V+ FD M+L LL+G+Y+YGF PS IQ AI + R VIAQAQSGTGK
Sbjct: 85 NWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGK 143
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 391
KT FSI +L +ID S + QAL+LAPTRELA QI V +G +
Sbjct: 143 KTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGK
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGK 144
Score = 39.5 bits (88), Expect = 0.083
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 382
KTA FS+++L +++ QA+ LAP+RELA+Q +VV +G
Sbjct: 144 KTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHA 409
SP + KT + + I Q+IDTS RE QA+ILAPT ELA QI K + L + ++
Sbjct: 47 SPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTP 106
Query: 410 CIGGTNVREDIRQLE 454
IG NV+ I +L+
Sbjct: 107 IIGNANVKRQIEKLK 121
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYR 278
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GK L L
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 279 FYNK 290
+ K
Sbjct: 61 IFQK 64
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F + +LQQI+ S+++ Q L+L PTREL QQ+ K + ++ A GG +
Sbjct: 52 KTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKI 111
Query: 431 REDIRQLE 454
E I++LE
Sbjct: 112 EEQIKKLE 119
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGK 257
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGK
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGK 52
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 57.2 bits (132), Expect = 4e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+GTGK
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGK 51
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KT F+ ILQ++ I R ++LIL PTRELA QIQ+ A G HL + GG
Sbjct: 51 KTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGV 110
Query: 425 NVREDIRQLE 454
+ + +L+
Sbjct: 111 GQQPQVDKLK 120
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 144 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ + +YGFEKPS IQQ I+P I+G+D IAQAQSGTGK
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGK 84
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQ-IQKVVIALGDHL 391
KTATFSI+ LQ IDTS QALILAPTRELAQQ I ++ LG +L
Sbjct: 84 KTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFILGVNL 130
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 359 QKVVIALGDHLNAKCHACIGGTNVREDIRQL 451
+KV++ LG+ L +AC GGT+ +ED ++L
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRL 216
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
K+ + I +L+++D QA+++ PTRELA Q+ ++ I + H+ AK A GGTN+
Sbjct: 131 KSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL 190
Query: 431 REDIRQLE 454
R+D+ +L+
Sbjct: 191 RDDVMRLD 198
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +3
Query: 27 RRIKVVTMDLREWTLGHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 206
+ +K+ DLR TL T ++ F+D LK ELL GI+ G+E PS+IQ+ +I
Sbjct: 60 KTLKLPPKDLRIKTLDVTSTKGNE----FEDYCLKRELLIGIFEMGWE-PSSIQEESIPI 114
Query: 207 CIQGRDVIAQAQSGTGK 257
+ GRD++A+A++GTGK
Sbjct: 115 ALSGRDILARAKNGTGK 131
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRA--IMPCIQGRDVIAQAQSGTGK 257
V++F+++ LK ELL+G+Y GF +PS IQ+ A +M +++IAQ+QSGTGK
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGK 90
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 382
KTA F +++L ++ + + Q L +APT ELA QI +V+ +G
Sbjct: 90 KTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMG 132
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 56.4 bits (130), Expect = 7e-07
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F+I ILQ + T+ + AL+LAPTRELA QI++ ALG + + IGG ++
Sbjct: 148 KTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMM 207
Query: 434 EDIRQL 451
E R L
Sbjct: 208 EQARDL 213
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V++F + +L ELL I + + +P+ IQ AI +QG+D++ A++G+GK
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGK 148
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/54 (48%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGK
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGK 200
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F++++L ++D +I QA+ +AP+RELA+QIQ+V+ +G I G+
Sbjct: 200 KTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGS 256
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 56.0 bits (129), Expect = 9e-07
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA +GTGK
Sbjct: 56 VAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGK 107
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 254 KTATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F++ +L ++ T QAL+L PTRELA Q+ + + G L A+ GG
Sbjct: 107 KTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGA 166
Query: 425 NVREDIRQL 451
+ +R L
Sbjct: 167 PIGRQVRAL 175
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGK
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGK 51
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F+I IL +D SI Q L++APTRELA QI + LG + +K +GG +
Sbjct: 51 KTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVS 108
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F + +L ID + RE QALILAPTRELAQQI + + HL GG N+
Sbjct: 64 KTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANI 123
Query: 431 REDIRQL 451
IR +
Sbjct: 124 MNQIRDI 130
Score = 41.5 bits (93), Expect = 0.021
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKL------ 260
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGK
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 261 LLSLYRFYNKSIQAFV 308
LL L ++ +QA +
Sbjct: 72 LLDLIDVNSREVQALI 87
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GK
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGK 70
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFSI L ++ + + + +I++PTRELA Q + + +LG A AC+GG ++
Sbjct: 70 KTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTRACVGGNSLG 125
Query: 434 EDIRQLE 454
D++ L+
Sbjct: 126 ADVKALQ 132
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
Q + FD LK+ +L+GI GF PS +Q ++I +QG+D+IAQAQ+GTGK
Sbjct: 42 QDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGK 95
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG K GG +++
Sbjct: 95 KTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIK 153
Query: 434 EDIRQLE 454
LE
Sbjct: 154 RQCDLLE 160
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V TF ++ L E LL + GF +P+AIQ AI P + GRDV+ A +GTGK
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGK 54
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKL------LLS 269
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGK LL+
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 270 LYRFYNKSIQAFV 308
F K +QA V
Sbjct: 116 NIDFSKKCVQALV 128
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQI 358
KTA F + +L ID S + QAL+LAPTRELAQQ+
Sbjct: 105 KTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQV 139
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/66 (36%), Positives = 43/66 (65%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
D+ +TF+++ L+ L+R + G EKP++IQ+ AI ++G+DV+A+A++G+GK L
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 273 YRFYNK 290
K
Sbjct: 80 LPLLQK 85
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/59 (38%), Positives = 39/59 (66%)
Frame = +3
Query: 81 HTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+G+GK
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F+I IL ++ A ILAPTRELAQQI++ +LG + + +GG N+
Sbjct: 131 KTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMM 190
Query: 434 EDIRQL 451
+ R L
Sbjct: 191 DQARDL 196
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/70 (35%), Positives = 43/70 (61%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
++ ++F+++ L L+R + G EKP+ IQQ AI ++G+DV+A+A++G+GK L L
Sbjct: 42 EEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYL 101
Query: 273 YRFYNKSIQA 302
K A
Sbjct: 102 LPLLQKLFSA 111
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+GTGK L
Sbjct: 24 QRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTL 79
Score = 38.3 bits (85), Expect = 0.19
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KT F I L+ + DT Q LIL PTRELA Q+ V L +GGT+
Sbjct: 77 KTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSE 136
Query: 431 REDIRQL 451
R I+ +
Sbjct: 137 RNQIQSI 143
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGK
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGK 51
Score = 40.3 bits (90), Expect = 0.047
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +2
Query: 254 KTATFSISILQQIDT------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
KTA F++ +LQ + T R +ALIL PTRELA QI + V +LN +
Sbjct: 51 KTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVF 110
Query: 416 GGTNVREDIRQL 451
GG ++ + +L
Sbjct: 111 GGVSINPQMMKL 122
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/52 (57%), Positives = 34/52 (65%)
Frame = +2
Query: 212 PRTRCYRSSPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 367
P R SP TATF+ISILQQID ++ +A LAPTR LAQQIQKV
Sbjct: 177 PCLRYISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA+F + IL++I+ + R QA+I+APTRELA QI + G + N IGG ++
Sbjct: 51 KTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADM 110
Query: 431 REDIRQLE 454
R+ I++L+
Sbjct: 111 RDQIKRLK 118
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF ++ L +++L + F + + IQ RAI ++G+++ ++ +GTGK
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGK 51
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+GTGK
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGK 51
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I IL+ ID S R QALILAPTRELA Q+ + + ++ GG ++
Sbjct: 53 KTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSID 112
Query: 434 EDIRQL 451
IR+L
Sbjct: 113 RQIREL 118
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGK 257
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGK
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGK 53
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I +++ ID+++++ QAL+L+PTRELA Q+ + + LG + GG + R
Sbjct: 95 KTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYR 154
Query: 434 EDI 442
I
Sbjct: 155 TQI 157
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KTA F++ IL ID +R QAL+L PTRELAQQ+ + + G + + + GG ++
Sbjct: 59 KTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADM 118
Query: 431 REDIRQL 451
R+ ++ L
Sbjct: 119 RQQLKSL 125
Score = 39.5 bits (88), Expect = 0.083
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGK
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGK 59
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
D+ +TF+++ L+ L+R + G EKP+ IQ+ AI ++G+DV+A+A++G+GK L
Sbjct: 20 DEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 273 YRFYNK 290
K
Sbjct: 80 LPLLQK 85
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/53 (47%), Positives = 40/53 (75%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
TF ++ L++E+L+G+ G+++PS IQ +AI I G D+IAQA+SGTGK ++
Sbjct: 44 TFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTGKTIV 96
Score = 37.1 bits (82), Expect = 0.44
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 302 IRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 427
IR+ LI+APTRE+A QI+ V+ ++ + KC IGG N
Sbjct: 147 IRKPLVLIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGGLN 189
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYN 287
+F D L ++ L G+ + KP+AIQ+ +I+P +QG+D++A A++G+GK L L +
Sbjct: 63 SFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVFE 122
Query: 288 K 290
K
Sbjct: 123 K 123
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 KTATFSISILQQIDTS----IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KT F I + +++ T+ + ALI+ PTRELA QI + V +G + IGG
Sbjct: 112 KTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDFTTGLIIGG 171
Query: 422 TNVREDIRQL 451
N++ + +L
Sbjct: 172 QNLKAEKNRL 181
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGK
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGK 56
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I +++++ T R QALIL PTRELA Q+ + L H + GG ++
Sbjct: 56 KTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIV 114
Query: 434 EDIRQLE 454
I+ L+
Sbjct: 115 HQIKALK 121
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
+P KT F + +L +IDT+++ Q LILAP++ELA Q +V G+ + A + I
Sbjct: 37 APTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVGASVASLI 96
Query: 416 GGTNVREDIRQLE 454
GG N R +++
Sbjct: 97 GGANGRRQADKIK 109
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK ELLR I GFE PS +QQ I I G D++ QA+SG GK
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGK 105
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KTA F I L+ ID I Q +ILAPTRE+A QI++V+ +LG + K + IGG +
Sbjct: 74 KTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAM 133
Query: 431 REDIRQL 451
D ++L
Sbjct: 134 DIDRKKL 140
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGK
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGK 74
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
FD++NL +E+L G+ A F + + +Q I P ++GRDVIA AQ+GTGK
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGK 51
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA + + IL ++ + A+I+APTRELAQQI + V + A GGT
Sbjct: 51 KTAAYLLPILDRLSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGT 110
Query: 425 N 427
+
Sbjct: 111 D 111
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 87 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
DW + TF D++L ++ + I G+E P+ IQ AI P + GRDV+ AQ+GTGK
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGK 61
Score = 33.5 bits (73), Expect = 5.4
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 254 KTATFS---ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA+F+ I++L + R ++L+L PTRELA Q+ + H+ IGG
Sbjct: 61 KTASFTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGV 120
Query: 425 NVREDIRQLE 454
+ +E + ++
Sbjct: 121 SFKEQEQAID 130
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 52.8 bits (121), Expect = 8e-06
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F +LQ ID S + Q LI+APTREL QI + H+ + A GG+N+
Sbjct: 52 KTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNI 111
Query: 431 REDIRQL 451
+E R++
Sbjct: 112 QEQAREI 118
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGK 257
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGK
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGK 52
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/66 (42%), Positives = 37/66 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG ++
Sbjct: 139 KTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLI 198
Query: 434 EDIRQL 451
R+L
Sbjct: 199 HQAREL 204
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGK
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGK 55
Score = 40.3 bits (90), Expect = 0.047
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQ 355
KTA F I I++++D + QAL+L+PTRELA Q
Sbjct: 55 KTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQ 88
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA FSI IL+Q+D+ R+ QA+++ PTRELA Q+ L + + GG N
Sbjct: 94 KTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKN 153
Query: 428 VREDIRQLE 454
+ +RQLE
Sbjct: 154 MNRQLRQLE 162
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGK
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGK 94
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++GTGK
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGK 79
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F + +L++I R +ALIL PTRELA Q+ + L H K A GG +++
Sbjct: 79 KTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMK 138
Query: 434 EDIRQLE 454
+ LE
Sbjct: 139 QQEDALE 145
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNV 430
KTA F++ +L + +RE Q L+LAPTRELAQQ+ V + H N K + GG++
Sbjct: 56 KTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDF 115
Query: 431 REDIRQLE 454
R L+
Sbjct: 116 GSQFRALK 123
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGK
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGK 56
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQI--QKVVIALGDHLNAKCHACIGGTN 427
KT + + I ++IDTS RE QALILAPT EL QI Q ++A L+ A IG N
Sbjct: 52 KTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVN 111
Query: 428 VREDIRQLE 454
+++ I+ ++
Sbjct: 112 IQKQIKNIK 120
Score = 40.7 bits (91), Expect = 0.036
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRF 281
+ TF+ + + L+ G+ P+ +Q I IQ +D++ +Q+GTGK L L
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPI 60
Query: 282 YNK 290
+ K
Sbjct: 61 FEK 63
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F+I IL++I R AL++ PTRELA Q+ + AL H + A GG ++
Sbjct: 70 KTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMG 129
Query: 434 EDIRQLE 454
E +++LE
Sbjct: 130 EQLQKLE 136
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++GTGK
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGK 70
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYN 287
F NL++ LL I GF P+ IQ++AI P +QG DV+A A++G+GK L N
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLN 82
Score = 36.7 bits (81), Expect = 0.58
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F I +L + I + L+L+PTREL+ QI + AL L+ + A +GG +
Sbjct: 72 KTAAFLIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDS 131
Query: 428 VREDIRQL 451
+ + L
Sbjct: 132 MDQQFELL 139
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F + +L ++DT Q +++APTRELA Q+ + + +G H + GG ++
Sbjct: 52 KTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDIN 111
Query: 434 EDIRQLE 454
IR L+
Sbjct: 112 RQIRALK 118
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGK
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGK 52
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KT FS+ L+ ID + Q LILAPTRE+A QIQ + A+G + + H IGGT
Sbjct: 16 KTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGLRSHVFIGGTLF 75
Query: 431 REDIRQLE 454
D ++L+
Sbjct: 76 GPDRQKLK 83
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNV 430
KTA F + L +IDTSI++ Q ++LAPTRELA Q+ + + + G D + GG +
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSY 124
Query: 431 REDIRQLE 454
+QLE
Sbjct: 125 GPQFQQLE 132
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L E LL + + GF + IQ I P + G+DV+ +AQ+GTGK
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGK 65
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D NLK+ + + GF++PS +Q+ AI ++G D+IAQAQ+GTGK
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGK 51
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F + I+ + + L++ PTRELA Q+ + G K GGT
Sbjct: 51 KTAAFGLPIMSMMKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYG 109
Query: 434 EDIRQLE 454
+ I +++
Sbjct: 110 KQIERIK 116
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGK
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGK 55
Score = 41.1 bits (92), Expect = 0.027
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGG 421
KTA F+I LQ + ++ Q LIL P REL +QI + I LG L N + GG
Sbjct: 55 KTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGG 111
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 409
SP KTA F I +++ + S Q L++APTRELA+QI+ I H + K +
Sbjct: 47 SPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVS 106
Query: 410 CIGGTNVREDIRQLE 454
IGG + + ++QLE
Sbjct: 107 LIGGIPIWQQLKQLE 121
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF+++ + L+ + +P+ IQQ AI +Q +++I + +GTGK
Sbjct: 4 TFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTGTGK 53
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N K + IGG +
Sbjct: 74 KTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPL 133
Query: 431 REDIRQ 448
+D+++
Sbjct: 134 EDDLKK 139
Score = 41.5 bits (93), Expect = 0.021
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
+F + L +++ +G+ GF+KPS IQ +AI G D+I +++SGTGK L+
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTGKTLV 77
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNV 430
KTA F + +LQ ID + QA+ILAPTREL QQI +I+ +H + A + GG +
Sbjct: 54 KTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQVSIATLCGGIPI 113
Query: 431 REDIRQLE 454
+ I +L+
Sbjct: 114 KPQIERLK 121
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF+ M L +LR + GF+ PS +Q ++I +QG+D++A+A++G+GK
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGK 73
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 5/41 (12%)
Frame = +2
Query: 254 KTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQ 361
KTA +SI I+Q++ ++I+ +A++L PTREL +Q++
Sbjct: 73 KTAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPTRELCEQVK 113
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GK
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F +S LQQI+ S + AL+L TRELA QI + +L + K GG N+
Sbjct: 96 KTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 431 R 433
+
Sbjct: 156 K 156
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/55 (40%), Positives = 39/55 (70%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
++VV+TF ++ ++EEL++ G++ PS IQ A+ ++G+DVI AQ+G+GK
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGK 59
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
A +L+PTRELA QI + ALG ++ +C +GG
Sbjct: 92 ACVLSPTRELAIQIAEQFEALGADISLRCAVLVGG 126
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+VV +F ++ L+ LLRGI + P+A+Q +AI +QGRD++A++ +GTGK
Sbjct: 44 EVVASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGK 97
Score = 33.1 bits (72), Expect = 7.2
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDH 388
KT + + IL +T +R+ + +LIL PT+ELA QI KV AL H
Sbjct: 97 KTGAYLLPILH--NTLLRKGKTSLILVPTKELALQITKVAKALSAH 140
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KT FS L + Q LILAPTRE+A QI V+ A+G + +CH IGGT +
Sbjct: 113 KTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPL 172
Query: 431 REDIRQLE 454
+D +L+
Sbjct: 173 SQDKTRLK 180
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGK
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGK 113
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHAC 412
+P + KTA F + +LQ++D ++ QAL+L PTRELA Q+ K + L + N K
Sbjct: 70 APTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVL 129
Query: 413 IGGTNVREDIRQLE 454
GG + + LE
Sbjct: 130 TGGMPLGPQLASLE 143
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L L GI A G+ + +Q +++ P ++G DVIAQA +G+GK
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGK 76
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA+F+I + + I+ QALI+ PTRELA Q++ + +G +C A G +++
Sbjct: 53 KTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIK 112
Query: 434 EDIRQLE 454
+ I +L+
Sbjct: 113 DQIAELK 119
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/73 (36%), Positives = 37/73 (50%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
SP KT + I IL +ID + QA+ILAP+ ELA QI + + N I
Sbjct: 54 SPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTKDNNISSEPLI 113
Query: 416 GGTNVREDIRQLE 454
GG N++ I L+
Sbjct: 114 GGANIKRQIENLK 126
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 162 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
GF P+ IQ+ AI ++G+D+IA++ +GTGK L L
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYL 65
>UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Flavobacteria bacterium BAL38
Length = 463
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
SP + KT F + I Q ++ ++ Q LIL P+REL QI++V +G H K + C
Sbjct: 40 SPTGSGKTLAFLLPIFQMMEEEVKGVQCLILVPSRELGLQIEQVWKKMGTHF--KVNTCY 97
Query: 416 GGTNVREDIRQL 451
GG ++ + + L
Sbjct: 98 GGHSIETEFKNL 109
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
F D+ LK +LL G+ G+E PS IQ++ I I +D++A++++GTGK L
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTL 67
Score = 36.3 bits (80), Expect = 0.77
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 391
KT +F I ILQ I + +++IL PTRELA QI ++ L ++
Sbjct: 65 KTLSFLIPILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYM 110
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GK
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGK 55
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQI 358
KTA F++ +L QID S + Q L++APTRELA Q+
Sbjct: 55 KTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQV 89
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KT FS L + Q LILAPTRE+A QI V+ A+G + +CH IGGT +
Sbjct: 112 KTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPL 171
Query: 431 REDIRQLE 454
+D +L+
Sbjct: 172 SQDKTRLK 179
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGK
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGK 112
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/63 (36%), Positives = 40/63 (63%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRF 281
++ F + L EE+L+ + G E+P+ IQ++AI ++G++VI +A++GTGK L L
Sbjct: 1 MDKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPI 60
Query: 282 YNK 290
K
Sbjct: 61 IEK 63
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L L+RG+ A G+ P+ +Q RAI + GRD++A AQ+GTGK
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGK 51
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+ M + E+ R + G+ P+ IQ++AI P ++GRDV+A A++G+GK
Sbjct: 468 FESMEILPEVFRAVKRKGYRVPTPIQRKAIPPALEGRDVVAMARTGSGK 516
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GK
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGK
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGK 52
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I I+++++ QAL++APTRELA Q+ + + +G + GG ++
Sbjct: 52 KTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIE 111
Query: 434 EDIRQLE 454
IR L+
Sbjct: 112 RQIRALK 118
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GK
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95
Score = 39.9 bits (89), Expect = 0.063
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F ++ LQQ++ + L++ TRELA QI K ++ N K GG ++
Sbjct: 95 KTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSI 154
Query: 431 RED 439
++D
Sbjct: 155 KKD 157
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GK
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGK 56
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA FS+ +LQ +D ++ Q L+LAPTRELA Q+ + + H+ A GG
Sbjct: 56 KTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRY 115
Query: 431 REDIRQL 451
+R L
Sbjct: 116 DVQLRAL 122
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GK
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 94
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F ++ LQQI+ + L++ TRELA QI K ++ + K GG ++
Sbjct: 94 KTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
Query: 431 RED 439
++D
Sbjct: 154 KKD 156
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
+P KTA + + +LQ+I ++ Q LI+ PTRELA Q+ V LG +L + A
Sbjct: 46 APTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVY 104
Query: 416 GGTNVREDIRQL 451
GG + IR L
Sbjct: 105 GGQAIERQIRGL 116
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGK
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGK 52
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGK
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGK 59
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KTA F++ +L ++D RE Q L+LAPTRELAQQ+ + G + + + GG
Sbjct: 59 KTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEY 118
Query: 431 REDIRQL 451
RE + L
Sbjct: 119 REQLSGL 125
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = +3
Query: 51 DLREWTLGHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVI 230
D RE+ H + D TF + L EE+L + GF P+ IQ AI P ++ RDV+
Sbjct: 28 DAREFGDDHADEE-DTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVV 86
Query: 231 AQAQSGTGK 257
AQ+GTGK
Sbjct: 87 GIAQTGTGK 95
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 370
KTA F + +L +D R QAL+LAPTRELA Q + +
Sbjct: 95 KTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTN 427
KT + + I Q+ID+S RE QALILAPT EL QI K + L + L IG N
Sbjct: 53 KTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVN 112
Query: 428 VREDIRQLE 454
+ I +L+
Sbjct: 113 IVRQIEKLK 121
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYR 278
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GK L L
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 279 FYNK 290
+ K
Sbjct: 61 IFQK 64
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
FD++ L +E+LR I G+ P+ +Q +I ++GRD++A AQ+GTGK
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGK 96
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/49 (40%), Positives = 36/49 (73%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGK
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGK 52
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I +++ I + + Q L++ PTRELA Q+ + + +G + A GG + R
Sbjct: 52 KTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFR 111
Query: 434 EDIRQLE 454
++ LE
Sbjct: 112 SQVKALE 118
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KT F+ L + Q L+LAPTRE+A QI VV+A+G + +CH IGG +
Sbjct: 76 KTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPI 135
Query: 431 REDIRQLE 454
+D + L+
Sbjct: 136 SQDKQHLK 143
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L + +L G+ A GF++PS IQ +AI G D+I QA+SGTGK
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGK 76
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F M L + ++RGI G++ P+ IQ++ I + GRDV+A A++G+GK L + K
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Score = 39.5 bits (88), Expect = 0.083
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F I + +++ T + +ALIL+PTRELA Q Q+ + +G K +GG +
Sbjct: 88 KTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDS 147
Query: 428 V 430
+
Sbjct: 148 M 148
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGK
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGK 61
Score = 39.5 bits (88), Expect = 0.083
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +2
Query: 254 KTATFSISILQ----QIDTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHA 409
KTA+FS+ I+Q Q +TS + ALIL PTRELA Q+ V A H +
Sbjct: 61 KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV 120
Query: 410 CIGGTNVREDIRQL 451
GG ++ + +L
Sbjct: 121 VFGGVDMNPQMAEL 134
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGK
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGK 54
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA+F I IL ++ QAL+L PTRELA Q+ + + +L + + A GG ++
Sbjct: 54 KTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIE 112
Query: 434 EDIRQL 451
+R L
Sbjct: 113 LQLRSL 118
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGK
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGK 57
Score = 40.7 bits (91), Expect = 0.036
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQI 358
KTA+F++ IL +ID QAL+LAPTRELA Q+
Sbjct: 57 KTASFALPILARIDIKQTTPQALVLAPTRELAIQV 91
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 50.0 bits (114), Expect = 6e-05
Identities = 19/55 (34%), Positives = 37/55 (67%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +G+GK
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGK 240
Score = 39.9 bits (89), Expect = 0.063
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 233 SSPVRNWKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 403
S+ + KTA F + +L+++ D+ R + LIL PTRELA Q Q V+ L N
Sbjct: 233 SASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITS 292
Query: 404 HACIGG 421
+GG
Sbjct: 293 CLIVGG 298
>UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyces
cerevisiae ATP-dependent RNA helicase MAK5; n=1;
Yarrowia lipolytica|Rep: Similarities with sp|P38112
Saccharomyces cerevisiae ATP-dependent RNA helicase MAK5
- Yarrowia lipolytica (Candida lipolytica)
Length = 998
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
T + L L++G+YA G++ P+ IQ+++I P + G DVI +A +G+GK L
Sbjct: 358 TLNGEQLNYSLIQGLYALGYKSPTEIQKKSIPPILAGDDVIGKASTGSGKTL 409
Score = 33.5 bits (73), Expect = 5.4
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 296 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHAC-IGGTNV 430
+S++ QA++ APTRELA QI DHLNA C I G V
Sbjct: 515 SSVKPPQAIVFAPTRELAHQIT-------DHLNAVSQFCPISGPRV 553
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F+I +L+ ++ R QALI+ PTREL Q+ + + +G ++ K A GG ++
Sbjct: 54 KTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIG 112
Query: 434 EDIRQL 451
I QL
Sbjct: 113 NQIAQL 118
Score = 37.9 bits (84), Expect = 0.25
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + ++ ++ R + GFE + IQ + + G DV+ +AQ+GTGK
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGK 54
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGK
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGK 53
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I ++++I+ QA+++APTRELA Q+ + + +G AK GG ++
Sbjct: 53 KTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIG 112
Query: 434 EDIRQLE 454
IR L+
Sbjct: 113 RQIRALK 119
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GK
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGK 119
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F I +++ + +++ +ALIL+P RELA Q KVV + + A +GG +
Sbjct: 119 KTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVS 178
Query: 428 VREDIRQL 451
+ E L
Sbjct: 179 LEEQFSLL 186
>UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=48; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 452
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/63 (36%), Positives = 40/63 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F D+ L LL+ + Y F++ + IQQ+AI I GRD++A +++G+GK L + +K
Sbjct: 7 FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
Query: 291 SIQ 299
S++
Sbjct: 67 SLK 69
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +2
Query: 233 SSPVRNWKTATFSISILQQ-IDT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAK 400
SS + KT F + +L + + T S ++ + LIL PTRELA+Q+ + ++ L+
Sbjct: 48 SSKTGSGKTLAFVLPMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYT 107
Query: 401 CHACIGGTNVREDIRQL 451
GG N + ++ L
Sbjct: 108 ATLITGGENFNDQVKAL 124
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F ++NL E+ I GFE+ S IQ AI ++G+D+I AQ+GTGK
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGK 59
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F+I ++ ++ + QALIL PTREL Q+ + L + N + GG +
Sbjct: 59 KTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEI 118
Query: 431 REDIRQL 451
+R L
Sbjct: 119 ERQLRAL 125
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGK
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGK 53
Score = 41.9 bits (94), Expect = 0.016
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
KTA + + ++Q + RE +ALILAPTRELAQQ+ + H
Sbjct: 53 KTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVY 112
Query: 416 GGTNVREDIRQL 451
GGT++R QL
Sbjct: 113 GGTSIRVQQEQL 124
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ L E ++R I G+E P+ IQ +AI ++G DV+ AQ+GTGK
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGK 341
Score = 37.5 bits (83), Expect = 0.33
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTS---IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA+F++ +LQ++ S R ++LIL PTRELA Q+ + G +L IGG
Sbjct: 341 KTASFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGE 400
Query: 425 NVRE 436
++ E
Sbjct: 401 SMAE 404
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 49.6 bits (113), Expect = 8e-05
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 215 RTRCYRSSPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD-HL 391
RT S K+ F + ++Q ID+ I+E QA+++APTRELAQQ+ L
Sbjct: 41 RTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKA 100
Query: 392 NAKCHACIGGTNVRED 439
IGGT++ +D
Sbjct: 101 GVSVKVFIGGTDIEKD 116
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK---LLLSLYRF 281
F+ NL+ L+ + FEKP+ IQ R I ++ ++I Q+Q+GTGK LL L +
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 282 YNKSIQ 299
+ I+
Sbjct: 66 IDSEIK 71
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 49.6 bits (113), Expect = 8e-05
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+GTGK
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGK 52
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 254 KTATF---SISILQQIDTSI--RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA F SI L++ D I + C+ L+LAPTREL QI G K + +G
Sbjct: 52 KTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVG 111
Query: 419 GTNVREDIRQL 451
GT+V +D +L
Sbjct: 112 GTSVNKDRNKL 122
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F M L EL++GI G++ P+ IQ++ I ++GRDV+A A++G+GK L + K
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Score = 38.3 bits (85), Expect = 0.19
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +2
Query: 254 KTATFSISILQQIDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F I + +++ + +ALIL+PTRELA Q K + LG + K +GG +
Sbjct: 89 KTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDS 148
Query: 428 V 430
+
Sbjct: 149 M 149
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ T+ + NL E+L I G+EKPS IQ ++I + GRD++ A++G+GK
Sbjct: 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGK 463
Score = 38.7 bits (86), Expect = 0.14
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 293 DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 451
DT AL++APTREL QQI+K H + + +GG ++ + Q+
Sbjct: 484 DTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQV 536
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLY 275
F D LK EL I GFE PS +Q +A+ + G D++AQA+SG GK + ++
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVF 92
Score = 34.3 bits (75), Expect = 3.1
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE----CQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIG 418
KTA F ++L+Q++ + CQA++L RELA QI++ +L A G
Sbjct: 86 KTAVFVFALLEQVEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFG 145
Query: 419 GTNVREDIRQLE 454
G E+++QL+
Sbjct: 146 GIPEDENVKQLK 157
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 49.6 bits (113), Expect = 8e-05
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
VE+F+++ L ++R ++ FE P+ +Q + I +QGRDV A A +G+GK
Sbjct: 15 VESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGK 66
Score = 32.7 bits (71), Expect = 9.5
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 203 ALHPRTRCYRSSPVRNWKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVI 373
AL R C S+ + KTA F I ++++ ++ + +A+IL+PTRELA Q V+
Sbjct: 50 ALQGRDVC-ASAVTGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLS 108
Query: 374 ALGDHLNAKCHACIGG-TNVREDIRQL 451
+ GG +NV+E+ +L
Sbjct: 109 QIIQFTPLTALLLTGGSSNVKEEEERL 135
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F+ M L EL R I + GF P+ IQ++AI + GRD++A +++G+GK L NK
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 KTATFSISILQQID--TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA F I ++ ++ +++ + LIL PTRELA QI V+ AL + + +GG
Sbjct: 60 KTAAFLIPLINKLQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGG 117
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V F + LKEELLR + GFE P+ +Q ++ + G +I QA++GTGK
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGK 123
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI--GGTN 427
KTA F +++L I+T + + L++ TRELAQQ + + LG + + C GG
Sbjct: 123 KTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEP 182
Query: 428 VREDIRQLE 454
V +I+ +E
Sbjct: 183 VSVNIQTIE 191
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 49.6 bits (113), Expect = 8e-05
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGG 421
KTA F + +LQQID S+ + QAL+L PTRELA Q+ + L L N K GG
Sbjct: 53 KTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGG 109
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK-------LLL 266
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGK +L
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 267 SLYRF-YNKSIQAFV 308
LY+ + K I+A V
Sbjct: 62 KLYKTDHRKGIKALV 76
Score = 40.7 bits (91), Expect = 0.036
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 KTATFSISILQQI-DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA FSI ILQ++ T R+ +AL+L PTRELA QI + A G + K HA I G
Sbjct: 51 KTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLK-HAVIFG 107
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F D+ L +ELL+ + G+E+P+ +Q AI + RD+IA AQ+GTGK
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGK 51
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F + ++Q++ + AL+L PTRELA Q+ + +L + H GG ++
Sbjct: 97 KTAAFGLPLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIA 156
Query: 434 EDIRQLE 454
E +R LE
Sbjct: 157 EQLRNLE 163
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGK
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGK 57
Score = 40.7 bits (91), Expect = 0.036
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGT 424
KTA F++ ++ +D + R+ Q L+LAPTRELA Q+ + A ++ ACI GG
Sbjct: 57 KTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQ 116
Query: 425 NVREDIRQLE 454
IR L+
Sbjct: 117 EYGSQIRALK 126
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGK
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGK 55
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 KTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA F++ +L+ + + + +AL+L PTRELA Q+ + V G HL+ K GG
Sbjct: 55 KTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGG 114
Query: 422 TNVREDIRQL 451
+ + L
Sbjct: 115 VKINPQMMAL 124
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F+ N ++ G+ A G+++P+ IQ +AI P + G DVI AQ+GTGK
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGK 51
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA +++ I+Q++ ++ R + L++APTRELA QI +LG + + GG N+
Sbjct: 51 KTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNM 110
Query: 431 REDIRQL 451
+ IR+L
Sbjct: 111 DQQIRRL 117
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A A +GTGK
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGK 268
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F++ +L+++ R+ + L+L PTREL Q+ V L N +GG
Sbjct: 268 KTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGL 327
Query: 425 NVR 433
+V+
Sbjct: 328 DVK 330
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F D+ L LL+ + F+KP+ +Q +AI ++GRDV+A+A++G+GK
Sbjct: 44 SFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGK 93
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
+ +FDD+ L + L+G+ G+ KP+ IQ+ I + G+D++ AQ+G+GK L L
Sbjct: 50 INSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFL 106
Score = 36.3 bits (80), Expect = 0.77
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +2
Query: 254 KTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KT F I IL+++ T + AL++ PTRELA QI + + +G+H IGG
Sbjct: 101 KTLAFLIPILERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGG 160
Query: 422 TNVREDIRQLE 454
+++ + +++
Sbjct: 161 KDLKFERNRMD 171
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQSGTGKLLLSLY 275
+ +F + EEL+R I GFEKP+ IQ +A +PC + GRD++ A++G+GK + L+
Sbjct: 61 IVSFGHLGFDEELMRQITKLGFEKPTQIQCQA-LPCGLSGRDIVGVAKTGSGKTVSYLW 118
Score = 32.7 bits (71), Expect = 9.5
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 272 ISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 448
I IL Q + E LILAPTREL QQ+ N A +GG N E +
Sbjct: 122 IHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQWKM 181
Query: 449 LE 454
L+
Sbjct: 182 LK 183
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Frame = +2
Query: 278 ILQQIDTSIREC-QALILAPTRELAQQIQKVVIALGDHL---NAKCHACIGGTNVREDIR 445
+++Q+ T+ + C AL++APTRELA+QI ++ + L HL CIGG + + D+
Sbjct: 71 LIKQVKTANKNCVYALVIAPTRELAKQIHEIAVQLASHLENNQFSIQLCIGGVSTKIDVS 130
Query: 446 QLE 454
++
Sbjct: 131 NIQ 133
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGK
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGK 65
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQI 358
KTA F++ +L + + + Q L+LAPTRELA Q+
Sbjct: 65 KTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQV 99
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA FS+ ILQ + R+ + LIL PTRELA QI + + A HLN K G
Sbjct: 54 KTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFG 113
Query: 419 GTNVREDIRQLE 454
G +R L+
Sbjct: 114 GVGQNPQVRALQ 125
Score = 37.5 bits (83), Expect = 0.33
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ L L + G+E P+ IQ AI ++G D++ AQ+GTGK
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGK 54
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 45 TMDLREWTLGHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 224
T + +W++ + + F D NL ++R I GF S IQ A+ + GRD
Sbjct: 78 TPPMGDWSVDQFKVEPAEGKVRFHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRD 137
Query: 225 VIAQAQSGTGK 257
+I +AQ+GTGK
Sbjct: 138 IIGKAQTGTGK 148
Score = 43.2 bits (97), Expect = 0.007
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +2
Query: 254 KTATFSISILQQIDTS------IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
KTA F I++LQ++ T E +ALILAPTRELA QI K L + + +
Sbjct: 148 KTAAFLITVLQKLLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVL 207
Query: 416 GGTNVREDIRQLE 454
GG + + QLE
Sbjct: 208 GGVDYDKQKEQLE 220
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+GTGK
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGK 55
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA FS+ +L +IDT+ + QAL+L PTRELA Q+ + + N GG ++
Sbjct: 55 KTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADM 114
Query: 431 REDIRQLE 454
R +R L+
Sbjct: 115 RNQLRALK 122
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +2
Query: 233 SSPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHAC 412
S+ + KTA+F+I IL Q+ A+IL PTRELA QI + A+G +N C
Sbjct: 47 SAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVV 106
Query: 413 IGG 421
IGG
Sbjct: 107 IGG 109
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF+++ L L+ GF+ PS IQ I ++GRD+IA A++G+GK
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGK 54
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
VE F+++ L + L+ I GF +++Q R I P + GRDV+ A++G+GK L L
Sbjct: 41 VEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFL 97
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYN 287
TF+D N LL + + GF KP+ IQ AI + D++A AQ+GTGK + +
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 288 KSIQA 302
K I++
Sbjct: 62 KIIES 66
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 KTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA + + IL +I +++ L+L PTRELA QI + + +N A GG
Sbjct: 51 KTAAYMLPILHKIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGG 107
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGK 257
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGK
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGK 69
Score = 41.9 bits (94), Expect = 0.016
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA F I +L++ID + +A+I+ PTRELA QI + + +L K GG ++
Sbjct: 69 KTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSL 128
Query: 431 REDIRQLE 454
+ + LE
Sbjct: 129 EKQFKDLE 136
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F +++L E L + GFE P+ IQ +AI P + G+DVI A +GTGK
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGK 54
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F + ++ ++ +AL+LAPTRELA QI + + G + IGG +
Sbjct: 54 KTAAFLLPLIDRL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMA 112
Query: 434 EDIRQL 451
+ L
Sbjct: 113 QQAEAL 118
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA F + ILQ++ R +A+I+ PTRELA+QIQ V+ ALG + + GG
Sbjct: 51 KTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGY 110
Query: 431 REDIRQL 451
+ I++L
Sbjct: 111 QGQIQRL 117
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGK
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGK 51
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL-GDHLNAKCHACIGGTNV 430
KT + I+++Q + +I + A+I+ PTRELA Q+Q L + KC A IGGT+V
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
Query: 431 REDIRQL 451
+D +++
Sbjct: 135 AKDRKRM 141
>UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
MAK5 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 754
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/62 (37%), Positives = 40/62 (64%)
Frame = +3
Query: 78 LHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
L D D + ++++L + G+ GF++P+AIQ++AI +QG+DVI +A +G+GK
Sbjct: 175 LPKDTDLPKWSMENVSLSTYTINGLAGCGFKEPTAIQRKAIPLALQGKDVIGKATTGSGK 234
Query: 258 LL 263
L
Sbjct: 235 TL 236
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KT F I L+ ID I Q LILAPTRE+A QI +V ++G + + K IGG +
Sbjct: 46 KTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAI 105
Query: 431 REDIRQL 451
D +++
Sbjct: 106 ENDKKKV 112
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 120 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
M +++L G+ GF++PS IQ +AI G D+I +A+SGTGK L+
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLV 49
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+GTGK
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGK 63
Score = 39.5 bits (88), Expect = 0.083
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 KTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA +++ +LQQ+ + + +ALIL+PTR+LA QI + G + +C GG
Sbjct: 63 KTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGG 119
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA FS+ IL +I+ QALIL PTRELA Q+ + LG L K A GG +
Sbjct: 97 KTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSG 156
Query: 431 REDIRQLE 454
RE LE
Sbjct: 157 REQADALE 164
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GK
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGK 97
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
SP KT +++ +L++I + QA+ILAP+REL QI +V+ + + I
Sbjct: 48 SPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLI 107
Query: 416 GGTNVREDIRQLE 454
GG NV++ + +L+
Sbjct: 108 GGANVKKQVEKLK 120
Score = 41.5 bits (93), Expect = 0.021
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +3
Query: 156 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
A GF+KP+ +Q++A + G+DVIA++ +GTGK L
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTL 56
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Frame = +2
Query: 254 KTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA F++ ++QQ I R +A+IL+PTRELA QI + ++ G L IG
Sbjct: 153 KTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIG 212
Query: 419 GTNVREDIRQL 451
G +R+ +R L
Sbjct: 213 GAPIRKQMRDL 223
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L E+++ + G+ P+ IQ +AI + +D++ AQ+GTGK
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGK 153
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D ET+D+M L E + + A G+ P+ +Q R IQG DV+ Q+Q+G+GK
Sbjct: 152 DPAPETWDEMALPEHVRNAVDAAGWTAPTKVQARTYETMIQGTDVLVQSQTGSGK 206
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+D+ +L++ IY YGFE PS +QQ +I IQG+ + AQ+G+GK
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGK 53
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F IS+L ++ CQA+I++PT+EL+ Q +V+ LG + G +
Sbjct: 53 KTAAFGISLLSLVNPQKSICQAVIISPTKELSNQTLEVINTLGTRSGIRGVCLTSGVMAK 112
Query: 434 EDIRQL 451
E ++
Sbjct: 113 EQFEKI 118
>UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5;
Endopterygota|Rep: ENSANGP00000011621 - Anopheles
gambiae str. PEST
Length = 523
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCH 406
+P + KTA F I IL + ++ C +ALI+ PTRELA+Q Q+ + LGD +N + H
Sbjct: 186 APTGSGKTAAFLIPILHHLKKPMK-CGFRALIICPTRELAKQTQREALRLGDEMNLRTH 243
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +GTGK
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGK 52
Score = 39.1 bits (87), Expect = 0.11
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KT +SIS+LQ+I Q LI+APTRELA QI + V + + A GG ++
Sbjct: 52 KTGAYSISMLQEIKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSM 109
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +3
Query: 87 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D + V+TF+D +++ I +EKP+AIQ +A+ + GRDVI A++G+GK
Sbjct: 222 DVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGK 278
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
Q+ E F+ ++L +L+G+ + G+ KPS IQ I + G+D+IA A +G+GK
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGK 281
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 254 KTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA-CIGG 421
KTA F I I++++ I + ++L PTRELA Q+ V + ++ +GG
Sbjct: 281 KTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGG 340
Query: 422 TNVREDIRQLE 454
N+R+ + L+
Sbjct: 341 LNLRQQEQMLK 351
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GK
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGK 343
Score = 39.9 bits (89), Expect = 0.063
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 KTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F + IL+++ + + +IL PTRELA Q V + L H + K +GG
Sbjct: 343 KTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGL 402
Query: 425 NVR 433
+++
Sbjct: 403 SLK 405
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF DMNL LL+ I A F +P+ IQ+ I + G+D+ A A +GTGK
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGK 231
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F + +L+++ RE + L+L PTREL Q+ V L +GG
Sbjct: 231 KTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGL 290
Query: 425 NVR 433
+V+
Sbjct: 291 DVK 293
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 126 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
+ E L+G+ GFE + IQ + I P ++GRDV+A A++G+GK L L
Sbjct: 68 VSENTLKGVKELGFEHMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFL 116
>UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=8; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio vulnificus
Length = 447
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F D+ L LL+ + F+K + IQQ+AI I G+D++A +++G+GK L + +K
Sbjct: 7 FKDLGLDNRLLKNLKHLDFQKATKIQQQAIPVAIAGKDLLASSKTGSGKTLAFVLPMLHK 66
Query: 291 SIQ 299
S++
Sbjct: 67 SLK 69
Score = 35.9 bits (79), Expect = 1.0
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +2
Query: 233 SSPVRNWKTATFSISILQQ-IDT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAK 400
SS + KT F + +L + + T S R+ + +ILAPTRELA+Q+ + + L+
Sbjct: 48 SSKTGSGKTLAFVLPMLHKSLKTKALSARDPRGVILAPTRELAKQVYGELRTMLGGLSYD 107
Query: 401 CHACIGGTNVREDIRQL 451
+GG N + ++ L
Sbjct: 108 ATLIVGGENFNDQVKAL 124
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA-LGDHLNAKCHACIGGTNV 430
KTA F++ +L+++++ + Q L+LAPTRELA Q+ A H + K A GGT+
Sbjct: 121 KTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDF 180
Query: 431 REDIRQL 451
R I L
Sbjct: 181 RSQISTL 187
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGK
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGK 121
>UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Psychroflexus torquis ATCC 700755
Length = 443
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
SP KT FS+ +L +D + Q LIL P+RELA QI++V+ +G K +A
Sbjct: 41 SPTGTGKTLAFSLPLLTILDPESPDVQVLILVPSRELAIQIEQVIRTMGS--GYKVNAVY 98
Query: 416 GGTNVRED 439
GG V +D
Sbjct: 99 GGRPVSKD 106
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF+ + L L+ + A G+E+P+ IQ+ A+ P ++G+D++ A +GTGK
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGK 86
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA FS+ +LQ+I AL+L PTRELA Q+ + + G L GG
Sbjct: 86 KTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQ 145
Query: 425 NVREDIRQLE 454
+ + +R L+
Sbjct: 146 VISQQLRVLK 155
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
F D LK E+L ++ G P+ IQ A+ ++G+D+I QA++GTGK L
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTL 53
Score = 37.5 bits (83), Expect = 0.33
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +2
Query: 254 KTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KT F++ I +++ S R+ +AL+L PTRELA Q+ + A+ HL K A GGT
Sbjct: 51 KTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELTAVAPHL--KVVAVYGGT 108
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+G+GK
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGK 54
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA F+I I Q +D + QAL+L PTRELA Q+++ + +G K A G
Sbjct: 54 KTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYG 108
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F I +++++D + QAL+L PTRELA Q+ + +L + GG ++
Sbjct: 53 KTAAFGIPLIERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIG 112
Query: 434 EDIRQLE 454
IR L+
Sbjct: 113 NQIRALK 119
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGK 257
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGK
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGK 53
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK--CHACIGGTN 427
KTA F + +L ID + QALIL+PTREL QQI+K + +++ + A GG
Sbjct: 53 KTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEK 112
Query: 428 VREDIRQLE 454
+ + L+
Sbjct: 113 IDRQMNNLK 121
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA F+I ILQ++ + +LILAPTREL+ QI++ +I+LG + +GG ++
Sbjct: 91 KTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMV 150
Query: 434 EDIRQL 451
QL
Sbjct: 151 SQALQL 156
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +3
Query: 87 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GK
Sbjct: 35 DKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGK 91
>UniRef50_Q8GUG7 Cluster: DEAD-box ATP-dependent RNA helicase 50;
n=2; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
50 - Arabidopsis thaliana (Mouse-ear cress)
Length = 781
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 21 GHRRIKVVTMDLREWTLGHLHTDWDQVV----ETFDDMNLKEELLRGIYAYGFEKPSAIQ 188
G RR V T D+ +W + D + +TF ++ E++++ + F++P+ IQ
Sbjct: 342 GDRRSVVYTRDMDDWRERNKTKDTRETGFFSRKTFAEIGCSEDMMKALKEQNFDRPAHIQ 401
Query: 189 QRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
A P I G+ I QSG+GK L L
Sbjct: 402 AMAFSPVIDGKSCIIADQSGSGKTLAYL 429
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
+F+ L ELLR +Y+ GF PS IQ ++ +Q RD++A A++G+GK L
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTL 213
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
L+L+PTRELA QIQ + G C GG ++++E
Sbjct: 237 LVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA F++ IL ++ AL LAPTRELA Q+ + ALG L +C A IGG
Sbjct: 127 KTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGG 182
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V TF ++ L + L+ + G P+A+Q+R I ++GRDV+ A++G+GK
Sbjct: 75 VPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK 127
>UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
dbp-9 - Neurospora crassa
Length = 676
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF D+ L L++ + FEKP+ +Q++AI + G+DV+ +A++G+GK
Sbjct: 96 TFSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGK 145
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F M L +L+GI G++ P+ IQ++ I ++GRD++A A++G+GK L + K
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Score = 38.3 bits (85), Expect = 0.19
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KTA F I + +++ + +ALIL+PTRELA Q K + LG K +GG N
Sbjct: 86 KTACFLIPLFEKLKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDN 145
Query: 428 V 430
+
Sbjct: 146 M 146
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F M L ++ L G+ G+ P+ IQ++AI ++G D+IA A++G+GK L N+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA + + I+ +++T E ++LI+ PTRELA Q KV LG N K IGG+ +
Sbjct: 63 KTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKL 122
Query: 431 REDIRQL 451
+ L
Sbjct: 123 SDQFDNL 129
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFY 284
+TF D+ L E+L+ + G++KP+ IQ+ +I +Q +D+I AQ+G+GK F
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTA----SFL 64
Query: 285 NKSIQAFVNVK 317
+Q +NVK
Sbjct: 65 LPMVQHLLNVK 75
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTA FS+ IL+++D + QA++L PTRELA Q+ + + + A GG ++
Sbjct: 53 KTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSID 112
Query: 434 EDIRQLE 454
+ QL+
Sbjct: 113 RQMLQLK 119
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGK
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGK 53
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 87 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGK
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGK 107
Score = 42.3 bits (95), Expect = 0.012
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 254 KTATFSISILQQIDTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA F + IL +I + R C+AL+LAPTRELA QI G IG
Sbjct: 107 KTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIG 166
Query: 419 GTNVREDIRQLE 454
G R++E
Sbjct: 167 GAKPGPQARRME 178
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
+F D+ L E L R + A GF+ PS +Q + G DVIAQA+SGTGK +
Sbjct: 38 SFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTM 89
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL 379
KT TF + L+++D R QAL LAPTRE A Q + + +
Sbjct: 87 KTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEM 128
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + LK+ELL G+ GF++ + +Q+ AI + RDV+A+A++GTGK
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGK 71
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL---NAKCHACIGGT 424
KT +F I ILQ ++ + QAL+L TRELA Q KV L ++ + IGG
Sbjct: 71 KTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGV 130
Query: 425 NVRED 439
++ ED
Sbjct: 131 SIAED 135
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA F + ILQ++ + ALILAPTREL QI + ++A+G L +GG
Sbjct: 101 KTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGG 156
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GK
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGK 101
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 30 RIKVVTMDLREWTLG-HLH-TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 203
R+ +D W G H+ D + +E+F D+NL EL + F+ P+ IQ +++
Sbjct: 13 RLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLS 72
Query: 204 PCIQGRDVIAQAQSGTGKLL 263
+ GRD+I A++G+GK L
Sbjct: 73 CVMSGRDIIGLAETGSGKTL 92
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F + NL +LRG+ A F P+ IQQ+ I + G+D++ A +G+GK
Sbjct: 791 SFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGK 840
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 254 KTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F + IL+++ + + IL PTRELA Q V L + + +GG
Sbjct: 840 KTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGF 899
Query: 425 NVRE 436
++RE
Sbjct: 900 SLRE 903
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F I+Q+I+ +AL+L PTRELA+Q+Q + H + GG +
Sbjct: 52 KTLAFGCGIIQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAIN 110
Query: 434 EDIRQLE 454
IRQLE
Sbjct: 111 PQIRQLE 117
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/54 (37%), Positives = 36/54 (66%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GK L
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTL 54
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA F+I ILQ + + + A +LAPTRELA QI + V ALG + + +GG ++
Sbjct: 154 KTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDM 212
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ + +++ GF+ P+ IQ +AI +Q RDVI AQ+G+GK
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGK 154
>UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
ROK1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 537
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +3
Query: 84 TDWDQVVETFDDM----NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
TD + +F+D+ NL +LL + A G+ +P+AIQ AI +GRD+IA A +G+
Sbjct: 95 TDIPLPIGSFEDLIARCNLNRKLLANLIASGYSEPTAIQCEAIPASAEGRDLIACAPTGS 154
Query: 252 GKLLLSL 272
GK L L
Sbjct: 155 GKTLAYL 161
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +F M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GK
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGK 326
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 KTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F + IL+++ + + ++L PTRELA Q V L H + K +GG
Sbjct: 326 KTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGL 385
Query: 425 NVR 433
+++
Sbjct: 386 SLK 388
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/49 (36%), Positives = 36/49 (73%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F +M L + LL+ + G+ +P+ IQ++AI ++G+D++A+A++G+GK
Sbjct: 8 FHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGK 56
Score = 37.1 bits (82), Expect = 0.44
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Frame = +2
Query: 254 KTATFSISILQQI---DTSIRE--CQALILAPTRELAQQIQKVV 370
KTA +++ ++Q+I S+RE +ALIL PT+EL QQ+Q ++
Sbjct: 56 KTAAYAVPVIQRILASKQSVREQDVKALILVPTKELGQQVQTMI 99
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KTA FS+ +L +++ S + QA+++APTRELA Q+ + LG ++ K GG ++
Sbjct: 76 KTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI 135
Query: 431 REDIRQLE 454
+ +R L+
Sbjct: 136 LDQMRALK 143
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGK
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGK 76
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D+ TF D+N+ + +L + G+ P+ IQ AI +QGRD++ AQ+G+GK
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGK 94
Score = 36.3 bits (80), Expect = 0.77
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 233 SSPVRNWKTATFSISILQQID--TSIREC-QALILAPTRELAQQIQKVVIALG-DHLNAK 400
S+ + KTA F I +L ++ TS + +ALIL PTRELAQQ+ V D
Sbjct: 87 SAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLF 146
Query: 401 CHACIGGTNVREDIRQLE 454
C +GG I L+
Sbjct: 147 CVPLVGGAPYNGQITALK 164
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+++ L +LL I G+ +P+ IQ +AI + G D+I AQ+GTGK
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGK 55
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KTA F I ++ +D SI + Q+LIL PTRELA Q+ + L + A GG ++
Sbjct: 51 KTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESI 110
Query: 431 REDIRQLE 454
IR L+
Sbjct: 111 ERQIRDLK 118
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGK
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGK 51
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = +2
Query: 254 KTATFSISILQQ--IDTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNA-KCHACI 415
KTA F+I +LQ + IR AL+LAPTRELAQQI+K V A L + K +
Sbjct: 168 KTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVV 227
Query: 416 GGTNVREDIRQL 451
GGTN+ + +L
Sbjct: 228 GGTNIEKQRSEL 239
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/85 (28%), Positives = 49/85 (57%)
Frame = +3
Query: 3 QRIPKMGHRRIKVVTMDLREWTLGHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 182
+R+ +M +I+ V + T+ T +E+F+DM L +++ I + + +PS+
Sbjct: 84 ERVSRMNPDQIEEVVRLNLDVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYTRPSS 143
Query: 183 IQQRAIMPCIQGRDVIAQAQSGTGK 257
IQ +A+ + GRD++ A++G+GK
Sbjct: 144 IQAQAMPIALSGRDLLGCAETGSGK 168
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
F ++L+ +++RG+ A F P+ IQ AI + G D++ Q++SGTGK L+
Sbjct: 27 FSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTGKTLI 78
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KT + ++ LQ S + + L++ PTRELA Q+ + LG+ L + K + +GGT+V
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDV 134
Query: 431 REDIRQL 451
D +L
Sbjct: 135 TRDREKL 141
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFYNK 290
F+ MNL + + I GF P+ IQ++AI ++GRDV+A +++G+GK + NK
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINK 360
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
F M L E +LRG+ F PS IQ RAI G D++ QA+SGTGK L+
Sbjct: 24 FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTGKTLV 75
Score = 40.7 bits (91), Expect = 0.036
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KT F++ I + + + Q+L + PTRE+A QI+ V+ +G + N + + IGG ++
Sbjct: 72 KTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDI 131
Query: 431 REDIRQLE 454
+D + L+
Sbjct: 132 SQDRKNLQ 139
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKLL 263
+F + L ++L+ I A FEKP+AIQ +A +PC+ GR+VI A++G+GK +
Sbjct: 189 SFGHLQLDQKLVNKIVAQNFEKPTAIQSQA-LPCVLSGRNVIGVAKTGSGKTI 240
>UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative;
n=2; Filobasidiella neoformans|Rep: Translation
initiation factor, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 932
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
VV ++ +NLK +LLR I YG P+ IQ R + I+G D+IAQA T +++
Sbjct: 342 VVSKWEHLNLKVDLLRSISKYGIGPPNKIQTRVLPFMIKGSDIIAQAPPTTERII 396
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+GTGK
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGK 63
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 394
KTA F+I +L +ID + + QAL+L PTRELA Q+ + G +L+
Sbjct: 63 KTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLS 109
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/67 (31%), Positives = 41/67 (61%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F+I I++++ + +AL+L PTRELA Q+++ + L + + GGT+V+
Sbjct: 50 KTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVK 109
Query: 434 EDIRQLE 454
+++ L+
Sbjct: 110 QNLDILQ 116
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK---LLLSLYR 278
+F + L E++L GI G+ PS IQ AI ++G++++ Q+QSG+GK LLS +
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKGKNLVMQSQSGSGKTMAFLLSTLQ 85
Query: 279 FYNK 290
N+
Sbjct: 86 LINR 89
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 367
KT F +S LQ I+ CQ +I+ TRELA+Q +
Sbjct: 75 KTMAFLLSTLQLINRKDPFCQVIIIVNTRELARQTASI 112
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 254 KTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA FS+ ++QQ+ S + +ALI APTRELA+QI + A + N A G
Sbjct: 51 KTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFG 110
Query: 419 GTNVREDIRQLE 454
G + R LE
Sbjct: 111 GRKMSSQERMLE 122
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F E+++ + G+EK + IQQ+AI +G D+ A AQ+GTGK
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGK 51
>UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2;
Lactobacillus|Rep: ATP-dependent RNA helicase -
Lactobacillus plantarum
Length = 444
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
+P + KT F+ +L+ + QALILAP++ELA Q VV G ++AK A
Sbjct: 38 APTGSGKTLAFTWPMLEALRVG-EGTQALILAPSQELAMQTTNVVREWGQLIDAKVLAIT 96
Query: 416 GGTNVREDIRQLE 454
GG NV+ + +L+
Sbjct: 97 GGANVKRQMEKLK 109
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTAT +I I +++T + + QALI+ PTRELA Q +G + K A GG
Sbjct: 65 KTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGG 120
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGK 257
F NL +L+ + F++PS IQ AI P IQ + D+IA +Q+G+GK
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAI-PLIQKKQDLIALSQTGSGK 65
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF + L E++ + A G+ KP+ +QQRAI I GRD++ + +G+GK
Sbjct: 44 TFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGK 93
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F ++L LL+ + GF +P+ IQ AI P + GRDV+A A +G+GK
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGK 51
Score = 41.5 bits (93), Expect = 0.021
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 254 KTATFSISILQQ-IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA F + IL Q ID +AL++ PTRELA QI + + L H A GG ++
Sbjct: 51 KTAAFLLPILHQLIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSI 110
Query: 431 R 433
R
Sbjct: 111 R 111
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKL------L 263
+ TF+ NL + L + + GF P+ IQ+++ + GRD++ AQ+GTGK L
Sbjct: 1 MSTFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPL 60
Query: 264 LSLYRF 281
L LY+F
Sbjct: 61 LKLYKF 66
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + L EL+ + A G+E P+ IQ AI + G D++A AQ+GTGK
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGK 79
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK---LLLSLYR 278
+F D+NL L + F+ P+ IQ++A + GRDV+ AQ+GTGK LL L R
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 279 FYNKSIQ 299
S Q
Sbjct: 70 MLKYSEQ 76
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC-QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KT + + +L+ + S ++ + LI+ PTREL Q+ + + L ++N + GG N+
Sbjct: 59 KTFAYLLPLLRMLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNI 118
Query: 431 REDIRQL 451
+ L
Sbjct: 119 NTQHQDL 125
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/73 (36%), Positives = 37/73 (50%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 415
SP KT + I Q+ SI Q LIL PTREL+ QI+ V L + +C
Sbjct: 54 SPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCH 113
Query: 416 GGTNVREDIRQLE 454
GG + ED++ L+
Sbjct: 114 GGRWLGEDLKNLK 126
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V++F D+ LK + +G++ S IQ ++P ++GRD+I Q+ SGTGK
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGK 60
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 382
KTATF++++L ++DT I Q + L PTRELA+Q Q VV LG
Sbjct: 163 KTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGK 257
+ D+NL +LL+GIY GF +PS IQ A+ + ++IAQA +G+GK
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGK 163
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 403
KTATF++++L +++ ++ QAL + PTRELA Q +V+ LG KC
Sbjct: 150 KTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIKC 199
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
+ + L +LL+GI GF KPS IQQ A +P I G ++IAQA++G+GK
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCA-LPLILGSCTNIIAQAKNGSGK 150
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
VE+F+ L+EE++ + + KP+ IQ+ AI + GRD++A AQ+G+GK
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGK 224
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/46 (52%), Positives = 27/46 (58%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
AL+LAPTRELAQQIQ+V G +NA GG IR LE
Sbjct: 198 ALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
F+ L + +L GF KP+AIQ + + + GRD++ AQ+G+GK L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTL 174
>UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1220
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 239
VV ++ +NL +LLR I YG P+ IQQRA+ ++G D+IAQA
Sbjct: 644 VVSKWEHLNLHPDLLRSILKYGLGPPNKIQQRALPFLLRGSDIIAQA 690
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
+ +F ++ L + ++ G+ A F+KPS IQ RA+ + R++IAQ+QSGTGK
Sbjct: 95 ISSFSELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGK 148
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +2
Query: 254 KTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALG 382
KT F ++IL ++D + QAL LAP+RELA+QIQ V+ ++G
Sbjct: 148 KTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIG 191
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRF 281
+ +FDD+ L E + + ++KP+ +Q+ AI I GRD++A AQ+G+GK L
Sbjct: 294 ITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPI 353
Query: 282 YNK 290
N+
Sbjct: 354 LNQ 356
>UniRef50_Q502G7 Cluster: LOC553462 protein; n=3; Danio rerio|Rep:
LOC553462 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 310
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 57 REWTLGHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIA 233
R W+ L V ++ D+ + E +LR + GF P+AIQ + P I+ R D++
Sbjct: 201 RHWSRASLEAPGPADVSSWRDLLVPEPVLRALAVLGFSAPTAIQALVLPPAIRDRLDILG 260
Query: 234 QAQSGTGKLL 263
A++G+GK L
Sbjct: 261 AAETGSGKTL 270
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KTA F + +LQQID R Q+LIL PTREL QI + +++ K GG+++
Sbjct: 53 KTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSI 112
Query: 431 REDIRQLE 454
IR L+
Sbjct: 113 DSQIRSLK 120
Score = 41.5 bits (93), Expect = 0.021
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGK 257
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGK
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGK 53
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL-LSLYRFY 284
TF + L E+L + G+ P+ IQ + I + G+DV+A AQ+GTGK +L Y
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 285 NKSIQAFVNVKL 320
+QA+ N +
Sbjct: 66 R--LQAYANTSV 75
Score = 41.9 bits (94), Expect = 0.016
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Frame = +2
Query: 254 KTATFSISILQQI----DTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHA 409
KTA F++ +L ++ +TS+ + ALI+APTRELA QI + V G +L +
Sbjct: 55 KTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAV 114
Query: 410 CIGGTNVREDIRQLE 454
GG N+ I L+
Sbjct: 115 VFGGINIEPQIAALQ 129
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF+ + L E +R I G+ P+ IQ I +QG+D++A AQ+GTGK
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGK 74
Score = 40.7 bits (91), Expect = 0.036
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA F + I++ + + + +L+L PTRELA Q++ A +L + A GG
Sbjct: 74 KTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGG 133
Query: 422 TNVREDIRQLE 454
++R +++L+
Sbjct: 134 VSIRPQVKRLQ 144
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+GTGK
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGK 73
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQI 358
KTA F++ +L +ID + RE Q LILAPTRELA Q+
Sbjct: 73 KTAAFALPMLSRIDPARREPQLLILAPTRELALQV 107
>UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Probable ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 410
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 233 SSPVRNWKTATFSISILQQIDTS---IRECQALILAPTRELAQQIQKVVIALGDHLNAKC 403
SSP + KTA + I ++Q++ R+ +A++L P RELA+QI L L+
Sbjct: 43 SSPTGSGKTAAYLIPVIQELSAGKSPTRQPKAIVLVPVRELAEQIASFFDKLAAGLDLNA 102
Query: 404 HACIGGTNVREDIRQL 451
A +GG + ++ +QL
Sbjct: 103 VAIVGGEDFKKQEKQL 118
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +2
Query: 254 KTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KTA F++ +LQ++ T ++ ++LI+ PTRELA Q+ V LN + A GG
Sbjct: 51 KTAAFTLPLLQRLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGG 110
Query: 422 TNVREDIRQLE 454
+ I QL+
Sbjct: 111 VRIEPQIAQLQ 121
Score = 39.5 bits (88), Expect = 0.083
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F+ + L++EL+ I G+ + IQ+ AI + D++A AQ+GTGK
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGK 51
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
F ++ L +L + F +P+ IQ AI P + G+D++A AQ+GTGK L L
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFL 57
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
KT F + +Q + T R+ +ALIL PTRELA QI + ++ + + +GG N
Sbjct: 52 KTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLN 111
Query: 428 VREDIRQL 451
R +R +
Sbjct: 112 ERSQLRDI 119
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
TF+ + L E+LR + G P+ IQ+++I I GRD++ AQ+GTGK
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGK 51
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KT F + +L +I R +AL+L+PTRELA QI + +L+ +GG
Sbjct: 51 KTGGFLLPVLHKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGV 110
Query: 425 NVREDIRQLE 454
+ R L+
Sbjct: 111 DFIRQERNLK 120
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYA-YGFEKPSAIQQRAIMPCI---QGRDVIAQAQSGTGK 257
+TF+D+ L ELLRG+Y FEKPS IQ +P I R++IAQA +G+GK
Sbjct: 87 KTFEDLGLSAELLRGLYGEMKFEKPSKIQAET-LPLILMPPHRNLIAQAHNGSGK 140
Score = 36.7 bits (81), Expect = 0.58
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 388
KT F++ +L +ID +++ Q L++ PTREL Q V+ +G +
Sbjct: 140 KTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKY 184
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 670 KTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
Score = 39.5 bits (88), Expect = 0.083
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGK
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGK 670
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYR 278
V+E FD++ L + I +++P+ IQ+ AI ++ RD++A AQ+G+GK L
Sbjct: 182 VIENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIP 241
Query: 279 FYN 287
N
Sbjct: 242 IIN 244
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GK L L
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFL 105
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 KTATFSISILQ----QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
KT F I I++ Q TS+ AL+++PTRELA Q +V++ +G+ + IGG
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGG 159
Query: 422 TNVREDIRQL 451
+++ + +++
Sbjct: 160 KDLKNEQKRI 169
>UniRef50_A5K8S1 Cluster: DEAD/DEAH box helicase, putative; n=1;
Plasmodium vivax|Rep: DEAD/DEAH box helicase, putative -
Plasmodium vivax
Length = 862
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
GH D++ ++ D+ L++ +L Y + F P+ IQ+ AI +QGRDVI +++G+
Sbjct: 99 GHDFLDFENILL---DVRLRKAIL---YLFKFRHPTKIQKAAIPHILQGRDVIISSKTGS 152
Query: 252 GKLLLSLYRFYNKSIQAFVNVK 317
GK + L I+A +N K
Sbjct: 153 GKTMAYLIPLVQNIIKANINEK 174
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGK L+
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLV 75
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1029
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/50 (36%), Positives = 35/50 (70%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F ++ L L++ + FEKP+ +Q++AI +QG+DV+ +A++G+GK
Sbjct: 307 SFAELGLDPRLVQAVAKQSFEKPTLVQRKAIPLALQGQDVLCKAKTGSGK 356
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +F D+ L +++ I G+E+P+ IQQ I + G DV QA +GTGK
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGK 54
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 430
KTA F I ++ + R Q ++L P+RELA Q+ + L H GG +
Sbjct: 54 KTAAFGIPAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPI 113
Query: 431 REDIRQL 451
I+ L
Sbjct: 114 ERQIKAL 120
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/52 (32%), Positives = 36/52 (69%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGK
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGK 52
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F I +++++ + Q+LILAPTRELA Q+ + + + GG +
Sbjct: 52 KTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIE 110
Query: 434 EDIRQLE 454
I+ L+
Sbjct: 111 RQIKALK 117
>UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase MAK5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 772
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
D ++ + ++L L R A F P+AIQ RAI I GRDV+ A++G+GK L
Sbjct: 168 DDLLPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTL 224
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GK
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGK 309
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 254 KTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F + IL+++ + + LIL PTRELA Q V + + CIGG
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGL 368
Query: 425 NVREDIRQL 451
+++ ++L
Sbjct: 369 SLKLQEQEL 377
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNV 430
KT F + IL++ID + QALI+APTRELA QI ++ L + A GG +V
Sbjct: 55 KTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDV 114
Query: 431 REDIRQLE 454
+ +R+L+
Sbjct: 115 AQQLRKLK 122
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
++ F ++ + E + G + + IQ++AI + G+D+I QA++GTGK L
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTL 57
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+G+GK L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTL 85
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F++S+L + E + LIL P+RE+AQQI KV + L + IGGT
Sbjct: 83 KTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGS 141
Query: 434 EDIRQLE 454
+ QL+
Sbjct: 142 KQANQLK 148
>UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 549
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F ++NL +LL I ++ + IQ++AI P + G+DV AQ+GTGK
Sbjct: 3 FSELNLDSQLLSAIQKLNYDDCTPIQEQAIPPVLDGKDVAGLAQTGTGK 51
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNV 430
KTA F++ ILQ + I QALILAPTRELA Q+ + L + N GG
Sbjct: 56 KTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEY 115
Query: 431 REDIRQL 451
++QL
Sbjct: 116 GRQLKQL 122
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3
Query: 93 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGK
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGK 56
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ F D+ L LLR + G+ KP+ IQ ++I ++GRD++ AQ+GTGK
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGK 57
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 418
KTA+F++ +L ++ + R + L+LAPTREL QI + H + G
Sbjct: 57 KTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFG 116
Query: 419 GTNVREDIRQLE 454
G + ++ LE
Sbjct: 117 GVSQVHQVKALE 128
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,127,611
Number of Sequences: 1657284
Number of extensions: 17890842
Number of successful extensions: 53589
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 49201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53184
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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