Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30049
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 111 5e-25
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 111 5e-25
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 103 1e-22
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 103 1e-22
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 76 2e-14
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 58 6e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 50 2e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 46 3e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 46 3e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 45 6e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 8e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 3e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 42 6e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 42 6e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 6e-04
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 42 6e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 42 6e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 41 0.001
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 41 0.001
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 41 0.001
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 39 0.004
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 39 0.004
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 39 0.004
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 39 0.004
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 38 0.010
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.010
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 37 0.013
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 37 0.013
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 37 0.013
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 35 0.052
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 35 0.052
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 33 0.27
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 32 0.36
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 32 0.36
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 32 0.36
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical... 29 3.4
Z34989-1|CAA84441.1| 404|Caenorhabditis elegans Ndr protein kin... 29 4.5
U41016-7|ABC71807.1| 476|Caenorhabditis elegans Sensory axon gu... 29 4.5
U41016-6|ABC71808.1| 474|Caenorhabditis elegans Sensory axon gu... 29 4.5
AF275634-1|AAF91417.1| 469|Caenorhabditis elegans SAX-1 Ndr pro... 29 4.5
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z50109-6|CAA90439.2| 344|Caenorhabditis elegans Hypothetical pr... 28 5.9
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 28 5.9
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 28 5.9
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 28 5.9
AC084197-31|AAG23466.1| 105|Caenorhabditis elegans Hypothetical... 28 5.9
AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 111 bits (267), Expect = 5e-25
Identities = 50/67 (74%), Positives = 61/67 (91%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 434 EDIRQLE 454
EDIR+L+
Sbjct: 136 EDIRKLD 142
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGK
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGK 76
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +1
Query: 487 GRVYDMIIVVRFHANTIKLFVLDEADE 567
GRV+DMI IKL VLDEADE
Sbjct: 153 GRVFDMIRRRNLRTRAIKLLVLDEADE 179
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 111 bits (267), Expect = 5e-25
Identities = 50/67 (74%), Positives = 61/67 (91%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 434 EDIRQLE 454
EDIR+L+
Sbjct: 136 EDIRKLD 142
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGK
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGK 76
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +1
Query: 487 GRVYDMIIVVRFHANTIKLFVLDEADE 567
GRV+DMI IKL VLDEADE
Sbjct: 153 GRVFDMIRRRNLRTRAIKLLVLDEADE 179
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 103 bits (247), Expect = 1e-22
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
G + ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 252 GK 257
GK
Sbjct: 78 GK 79
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/67 (65%), Positives = 54/67 (80%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+VR
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVR 138
Query: 434 EDIRQLE 454
+D R+LE
Sbjct: 139 DDQRKLE 145
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 487 GRVYDMIIVVRFHANTIKLFVLDEADE 567
GRV DMI + IK+FVLDEADE
Sbjct: 156 GRVGDMINRNALDTSRIKMFVLDEADE 182
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 103 bits (247), Expect = 1e-22
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 251
G + ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 252 GK 257
GK
Sbjct: 78 GK 79
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/67 (65%), Positives = 54/67 (80%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+VR
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVR 138
Query: 434 EDIRQLE 454
+D R+LE
Sbjct: 139 DDQRKLE 145
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 487 GRVYDMIIVVRFHANTIKLFVLDEADE 567
GRV DMI + IK+FVLDEADE
Sbjct: 156 GRVGDMINRNALDTSRIKMFVLDEADE 182
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/51 (64%), Positives = 42/51 (82%)
Frame = +3
Query: 120 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GK ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN C+G
Sbjct: 46 KTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTA 104
Query: 434 ED 439
E+
Sbjct: 105 EN 106
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT + I ++++I +++ QA+++ PTRELA Q ++ + L H+ K GGT++R
Sbjct: 93 KTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLR 152
Query: 434 EDIRQL 451
+DI +L
Sbjct: 153 DDIMRL 158
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGK
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGK 93
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/66 (42%), Positives = 37/66 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG ++
Sbjct: 139 KTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLI 198
Query: 434 EDIRQL 451
R+L
Sbjct: 199 HQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/66 (42%), Positives = 37/66 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 433
KT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG ++
Sbjct: 139 KTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLI 198
Query: 434 EDIRQL 451
R+L
Sbjct: 199 HQAREL 204
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GK
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGK 91
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F I+ LQQ++ E + + TRELA QI K +L K GG +
Sbjct: 91 KTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAI 150
Query: 431 REDIRQL 451
++D +L
Sbjct: 151 KKDEERL 157
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GK
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGK 91
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F I+ LQQ++ E + + TRELA QI K +L K GG +
Sbjct: 91 KTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAI 150
Query: 431 REDIRQL 451
++D +L
Sbjct: 151 KKDEERL 157
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GK
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGK 90
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F I+ LQQ++ E + + TRELA QI K +L K GG +
Sbjct: 90 KTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAI 149
Query: 431 REDIRQL 451
++D +L
Sbjct: 150 KKDEERL 156
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 261 KTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 320
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGK
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGK 261
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 286 KTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 345
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGK
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGK 286
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 430
KTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 670 KTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGK 257
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGK
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGK 670
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGK L+
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLV 75
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLL 266
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGK L+
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLV 75
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGS 127
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+F+ MNL ++L+ G+ P+ IQQ I + G+D+ A A +GTGK
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGK 198
Score = 34.3 bits (75), Expect = 0.090
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 424
KTA F + IL+++ + C + L+L PTRELA Q+ +V L + + C GG
Sbjct: 198 KTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGL 257
Query: 425 NVR 433
+++
Sbjct: 258 DLK 260
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA F I +LQ++ +AL+++PTRELA Q KVV LG +C +GG +
Sbjct: 74 KTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQI 133
Query: 431 RE 436
E
Sbjct: 134 EE 135
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGK 257
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GK
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGK 74
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 KTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KTA F I +LQ++ +AL+++PTRELA Q KVV LG +C +GG +
Sbjct: 74 KTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQI 133
Query: 431 RE 436
E
Sbjct: 134 EE 135
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGK 257
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GK
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGK 74
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 87 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKLL 263
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GK
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 264 LSLYRFYNKSIQ 299
L N +Q
Sbjct: 219 AFLVPLVNAILQ 230
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GK
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGK 94
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 254 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
KT F+I +LQ + + L+L PTRELA QI + ALG + +GG ++
Sbjct: 94 KTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/57 (29%), Positives = 36/57 (63%)
Frame = +3
Query: 87 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G+GK
Sbjct: 83 DFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGK 139
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +2
Query: 254 KTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHL 391
KT F I ++Q++ D S+ A+I+APT+EL QI K+ + L L
Sbjct: 139 KTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVKLSQAL 190
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GK
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GK
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +3
Query: 138 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
LL+ + GF + IQ ++I P ++G+DV+A A++G+GK L L
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFL 123
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/90 (26%), Positives = 48/90 (53%)
Frame = +3
Query: 3 QRIPKMGHRRIKVVTMDLREWTLGHLHTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 182
+ I +M +K +L T+ + D + ++T+ + +++ + + + KP++
Sbjct: 272 EEIRRMTKAEVKAYREELDSITVKGI--DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTS 329
Query: 183 IQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
IQ +AI + GRDVI A++G+GK L L
Sbjct: 330 IQAQAIPSIMSGRDVIGIAKTGSGKTLAFL 359
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
A+ILAPTRELA Q K L K GG + E I L+
Sbjct: 380 AVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLK 425
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GK
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GK
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GK
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 105 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GK
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 236 SPVRNWKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCH 406
SP + KT F + +++ I + + ALIL+P+REL QI V+ + LN
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 407 ACIGGTNVREDIRQLE 454
GG V ++I+ +
Sbjct: 113 TVTGGQKVDKNIKMFK 128
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GK
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 108 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFY 284
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GK L L F
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 285 NKSIQAF 305
K ++ F
Sbjct: 796 IKLMEEF 802
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 451
LI+APTREL Q L KC GG + +++ L
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 108 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLYRFY 284
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GK L L F
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 285 NKSIQAF 305
K ++ F
Sbjct: 796 IKLMEEF 802
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 451
LI+APTREL Q L KC GG + +++ L
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHL 861
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +3
Query: 96 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GK
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GK
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGK 351
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 439
A+I+APTRELAQQI++ G L K + IGG + RED
Sbjct: 381 AIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGAS-RED 420
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 454
L+L PTRELAQQ+Q+V I L K GG + R LE
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLE 250
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 159 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
YG F+KP+ IQ + + GRD+I+ A++G+GK L
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTL 181
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GK L
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTL 128
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 430
ALI++PTRELA Q + A+G H C IGG++V
Sbjct: 151 ALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDV 188
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GK
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 189
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQL 451
AL+L+PTRELA QI K N + GG N R+ + +L
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRL 270
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GK
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 173
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQL 451
AL+L+PTRELA QI K N + GG N R+ + +L
Sbjct: 209 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRL 254
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GK
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 170
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQL 451
AL+L+PTRELA QI K N + GG N R+ + +L
Sbjct: 206 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRL 251
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 108 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSLY 275
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GK L+
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLW 321
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 99 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GK L
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTL 178
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 162 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLLLSL 272
GFEKPS IQ + + G+D I +Q+G+GK L L
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFL 139
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Frame = +2
Query: 224 CYRSSPVRNWKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQIQ 361
C S + KT F + L ID + + + L+L+PTRELAQQI+
Sbjct: 124 CIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 111 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
F++ + EL + + + P+A+Q AI + G D + A++G+GK
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGK 52
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 296 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
T +R +ALI+APTREL QI K + AL + +GG
Sbjct: 64 TEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 296 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 421
T +R +ALI+APTREL QI K + AL + +GG
Sbjct: 231 TEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKLL 263
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GK +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTM 242
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHL------NAKCHACIGGTNVREDIRQL 451
LI+ P+RELA+QI ++I + D L + CIGG + E + +
Sbjct: 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDV 319
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 476 HHVHEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 381
HH HH+P HG H H HG HS H
Sbjct: 528 HHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAH 560
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 476 HHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQ 378
HH HH+P HGH H HG+ H H+
Sbjct: 563 HHGEHHHAPAH---HGHHGHHGSHGV-HHGHHE 591
>AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical
protein W08E12.1 protein.
Length = 228
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 479 AHHVHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQELSPPSE 357
++H H +P Y H H+ H H H+ +Q LS PS+
Sbjct: 14 SYHEHAELNPHDHYHHHHYPHSSVH---HTECYQTLSCPSD 51
>Z34989-1|CAA84441.1| 404|Caenorhabditis elegans Ndr protein kinase
protein.
Length = 404
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 439 YSPTGEWCSCTWWALQGRVYDMII 510
+ P G SC WW+L +Y+M+I
Sbjct: 234 FQPNGYTKSCDWWSLGVIMYEMLI 257
>U41016-7|ABC71807.1| 476|Caenorhabditis elegans Sensory axon
guidance protein 1,isoform a protein.
Length = 476
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 439 YSPTGEWCSCTWWALQGRVYDMII 510
+ P G SC WW+L +Y+M+I
Sbjct: 292 FQPNGYTKSCDWWSLGVIMYEMLI 315
>U41016-6|ABC71808.1| 474|Caenorhabditis elegans Sensory axon
guidance protein 1,isoform b protein.
Length = 474
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 439 YSPTGEWCSCTWWALQGRVYDMII 510
+ P G SC WW+L +Y+M+I
Sbjct: 292 FQPNGYTKSCDWWSLGVIMYEMLI 315
>AF275634-1|AAF91417.1| 469|Caenorhabditis elegans SAX-1 Ndr
protein kinase protein.
Length = 469
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 439 YSPTGEWCSCTWWALQGRVYDMII 510
+ P G SC WW+L +Y+M+I
Sbjct: 285 FQPNGYTKSCDWWSLGVIMYEMLI 308
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 317 ALILAPTRELAQQIQKVV 370
ALILAPTRELA QI + +
Sbjct: 462 ALILAPTRELAAQIHEAL 479
>Z50109-6|CAA90439.2| 344|Caenorhabditis elegans Hypothetical
protein C09H10.8 protein.
Length = 344
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 603 WIWSLENLWNNIFISFIKNKKFDGVGMKAHDDYHIIYTTLECPPRT*TPLSSWRISSR 430
W+W+L +L + ++ +N +F + + D +I+ +C P L S+R+ +R
Sbjct: 49 WVWALVDLPETMHATYKENAQFLNIINQVRDFLNILIKVHKCDPEMIKTL-SFRLGAR 105
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 2 PEDSKNGPSKDQGSYDGPPGM--DPGTLAH 85
P K P D SY GPPG D GT H
Sbjct: 202 PPGPKGNPGPDGQSYQGPPGPPGDSGTPGH 231
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 2 PEDSKNGPSKDQGSYDGPPGM--DPGTLAH 85
P K P D SY GPPG D GT H
Sbjct: 266 PPGPKGNPGPDGQSYQGPPGPPGDSGTPGH 295
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 2 PEDSKNGPSKDQGSYDGPPGM--DPGTLAH 85
P K P D SY GPPG D GT H
Sbjct: 266 PPGPKGNPGPDGQSYQGPPGPPGDSGTPGH 295
>AC084197-31|AAG23466.1| 105|Caenorhabditis elegans Hypothetical
protein Y73B6BL.22 protein.
Length = 105
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 442 SPTGEWCSCTWWALQGRVYDMIIVVRFHANTIKLFVLDEADENVVPE 582
SP EW + T W L + + ++R+ T++L + D++ V E
Sbjct: 40 SPIPEWRAYTQWILIAALLVIFCILRYGVETVELHPTAKKDQDPVIE 86
>AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical
protein Y45G5AM.6 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 497 YTRPWSAHHVHEHHSPVGEYLHGHWCHQ 414
YTR E + G GHWCH+
Sbjct: 110 YTRTIQCRECSEKNPNCGSSCEGHWCHE 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,375,172
Number of Sequences: 27780
Number of extensions: 415556
Number of successful extensions: 1276
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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