Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30038
(661 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 5e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 6e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 6e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 181 3e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 181 3e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 166 1e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 160 9e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 159 2e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 117 6e-27
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 101 3e-22
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 89 2e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 74 7e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 58 4e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 52 3e-07
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 36 0.032
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 36 0.032
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.096
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.6
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.6
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.0
At5g29020.1 68418.m03592 hypothetical protein 29 3.6
At2g33460.1 68415.m04101 p21-rho-binding domain-containing prote... 28 6.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.4
At4g01535.1 68417.m00199 hypothetical protein 27 8.4
At3g27530.1 68416.m03441 vesicle tethering family protein contai... 27 8.4
At2g25565.1 68415.m03060 hypothetical protein 27 8.4
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 27 8.4
At1g62420.1 68414.m07042 expressed protein contains Pfam profile... 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 5e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNTPAMYVAIQAVLSLYASGRTTGI 153
Score = 121 bits (292), Expect = 4e-28
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 199
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 6e-47
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNTPAMYVAIQAVLSLYASGRTTGI 153
Score = 121 bits (292), Expect = 4e-28
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 97.5 bits (232), Expect = 7e-21
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERG 199
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 6e-47
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FNTPAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNTPAMYVAIQAVLSLYASGRTTGI 153
Score = 121 bits (292), Expect = 4e-28
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 97.5 bits (232), Expect = 7e-21
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERG 199
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FN PAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNVPAMYVAIQAVLSLYASGRTTGI 153
Score = 121 bits (292), Expect = 4e-28
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERG 199
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNSPAMYVAIQAVLSLYASGRTTGI 153
Score = 117 bits (281), Expect = 8e-27
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERG 199
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (442), Expect = 2e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNSPAMYVAIQAVLSLYASGRTTGI 153
Score = 117 bits (281), Expect = 8e-27
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERG 199
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FN+PAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNSPAMYVAIQAVLSLYASGRTTGI 153
Score = 117 bits (281), Expect = 8e-27
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERG 199
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 181 bits (441), Expect = 3e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FN PAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNAPAMYVAIQAVLSLYASGRTTGI 153
Score = 121 bits (292), Expect = 4e-28
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG 199
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (441), Expect = 3e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFET
Sbjct: 69 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFET 128
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
FN PAMYVAIQAVLSLYASGRTTG+
Sbjct: 129 FNAPAMYVAIQAVLSLYASGRTTGI 153
Score = 121 bits (292), Expect = 4e-28
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 244 GILTSNTP 267
GILT P
Sbjct: 65 GILTLKYP 72
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERG
Sbjct: 154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG 199
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 166 bits (404), Expect = 1e-41
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+
Sbjct: 70 LKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFES 129
Query: 435 FNTPAMYVAIQAVLSLYASGRTTGM 509
F P+MY+ IQAVLSLY+SGRTTG+
Sbjct: 130 FAFPSMYIGIQAVLSLYSSGRTTGI 154
Score = 111 bits (268), Expect = 3e-25
Identities = 49/68 (72%), Positives = 60/68 (88%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 243
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 244 GILTSNTP 267
GIL+ P
Sbjct: 66 GILSLKYP 73
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERG
Sbjct: 155 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERG 200
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 160 bits (388), Expect = 9e-40
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
L YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFET
Sbjct: 24 LDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFET 83
Query: 435 FNTPAMYVAIQAVLSLYASGRTTG 506
F P+MY+ +QA LSL+ASGRTTG
Sbjct: 84 FAVPSMYIGMQAALSLHASGRTTG 107
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGTRS 655
VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERG S
Sbjct: 109 VLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGYTS 157
Score = 35.5 bits (78), Expect = 0.032
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 187 MVGMGQKDSYVGDEAQSKRGILTSNTP 267
MVGM + D +VGD+A+++ GILT + P
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYP 27
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 159 bits (386), Expect = 2e-39
Identities = 75/108 (69%), Positives = 86/108 (79%)
Frame = +3
Query: 186 DGRHGTERLVRRRRGTEQKRYPDLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 365
DG + E V G + LK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPV
Sbjct: 36 DGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPV 94
Query: 366 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGM 509
LLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+
Sbjct: 95 LLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGV 142
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERG
Sbjct: 143 VLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERG 188
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTS 258
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILT
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 259 NTP 267
P
Sbjct: 59 KDP 61
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 117 bits (282), Expect = 6e-27
Identities = 48/93 (51%), Positives = 66/93 (70%)
Frame = +3
Query: 231 TEQKRYPDLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 410
+E + D+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 411 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGM 509
M + MFE +N +++ IQAVL+LYA G TG+
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGL 152
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 646
V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RG
Sbjct: 153 VIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRG 198
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 252
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 253 TSNTP 267
N P
Sbjct: 67 DINYP 71
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 101 bits (243), Expect = 3e-22
Identities = 49/105 (46%), Positives = 66/105 (62%)
Frame = +3
Query: 198 GTERLVRRRRGTEQKRYPDLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 377
G E L + R + +L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 71 GDEALAKSRSSSTH----NLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 378 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGMC 512
+PL P +RE +I+FETFN P +Y+A+ +VL+L A+G TT C
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGTRSLP 661
V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG P
Sbjct: 176 VVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPP 226
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 76 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 162
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 89.4 bits (212), Expect = 2e-18
Identities = 37/82 (45%), Positives = 56/82 (68%)
Frame = +3
Query: 264 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 443
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 444 PAMYVAIQAVLSLYASGRTTGM 509
PA+++A VL+ +A+GR T +
Sbjct: 154 PALFMAKNPVLTSFATGRATSL 175
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 165
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGTRSLP 661
V+D G G + P+++GY L A++ L G LTD L+K L +G + P
Sbjct: 176 VVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRP 226
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 74.1 bits (174), Expect = 7e-14
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 440
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 441 TPAMYVAIQAVLSLYASGRTTG 506
Y + QAVLSLYA GR +G
Sbjct: 117 VSGFYASEQAVLSLYAVGRISG 138
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 76 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 168
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 264 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 410
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDEAQ 234
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + +D+ D+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 235 SKRGILTSNTPSN 273
KR + T + N
Sbjct: 65 GKRKLYTGSQALN 77
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 435 FNTPAMYVA-IQAVLSLYASGR 497
F ++Y+A Q+++ LY + R
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASR 142
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 422 HVRNIQHARHVRRHPSRALAVRVRSYHRYVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 601
H +++ H R P L+ ++ V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 602 RDLTDYLMKILTER 643
+ T+YL ++++ R
Sbjct: 187 KAFTNYLKELVSYR 200
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 171
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 52.0 bits (119), Expect = 3e-07
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +3
Query: 264 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 440
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 441 TPAMYVAIQAVLSLYASGRTTGMCWTPATVSPTPYPSTRDTHSL 572
PA+ + A S Y + G+C V P THS+
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHSI 184
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 225
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 509 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 637
VL G +H++P +G + R ++ G +TDYL ++L+
Sbjct: 173 VLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLS 215
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 35.5 bits (78), Expect = 0.032
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = +3
Query: 321 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 470
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 471 VLSLYASGRTTGM 509
VL+LYA+ RT+G+
Sbjct: 241 VLALYAARRTSGI 253
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 35.5 bits (78), Expect = 0.032
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = +3
Query: 321 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 470
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 471 VLSLYASGRTTGM 509
VL+LYA+ RT+G+
Sbjct: 241 VLALYAARRTSGI 253
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 200 PMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 63
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +3
Query: 234 EQKRYPDLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 410
E +Y +KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +3
Query: 234 EQKRYPDLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 410
E +Y +KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 176 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 90
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 365 DGMFLGGDTELIVEGMMPNLLHVIPVS 285
DG+ +GG E + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 454 TSPSKPCSRCTRPVVPPV-CAGLRRRCLPHRTHLRGIRTPSRHPASGL 594
++P+KPC T PV PP G R+R P + RG+ +P+ SG+
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPS-RGL-SPNPTDPSGV 71
>At2g33460.1 68415.m04101 p21-rho-binding domain-containing protein
contains Pfam PF00786: P21-Rho-binding domain
Length = 224
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 124 GDDAPRAVFPSIVG----RPRHQGVMVGMGQKDSYVGDEAQSKRGI-LTSNTPSNTESSL 288
G D P PS + + +G +V G + Y + ++RG L PSNT
Sbjct: 42 GSDGPTNTTPSWMNDFKTQEHEKGQVVSRGNSNKY-NPQGTNQRGAGLKELLPSNTNEKP 100
Query: 289 TGMTWRRFGIIPSTMSSVSPPR 354
T R+ G S + SPPR
Sbjct: 101 KQKTRRKPGGAASPNHNGSPPR 122
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 176 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 54
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g01535.1 68417.m00199 hypothetical protein
Length = 137
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 12 LRTCHLFNNTILIQDVRRGSCRVGSRQWL 98
+ + +L NT +++D + +C GS+ WL
Sbjct: 13 IESLNLLKNTTVLEDQGKWNCEFGSKLWL 41
>At3g27530.1 68416.m03441 vesicle tethering family protein contains
Pfam PF04869: Uso1 / p115 like vesicle tethering
protein, head region and PF04871: Uso1 / p115 like
vesicle tethering protein, C terminal region
Length = 914
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 453 YVAIQAVLSLYASGRTTGMCWTPATVSPTPYPSTRD 560
+VA V + T G +T+ P P+P++RD
Sbjct: 390 FVAADYVFKTFCEKNTEGQTMLASTLIPQPHPTSRD 425
>At2g25565.1 68415.m03060 hypothetical protein
Length = 206
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 491 RSYHRYVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY-LMKILTER 643
+ + RYV+D +G +Y G LP + +RL+L T + L +L R
Sbjct: 36 QQFKRYVIDKSNGSITFNGLYPGPPLPISQIRLNLLNYKFTPFHLFPLLDSR 87
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 249 PDLKYPIEHGIVTNWDDMEKIWHHTFY 329
P++ EHGI +D EK+W F+
Sbjct: 227 PEIMLDGEHGIDRTYDVAEKVWAEVFF 253
>At1g62420.1 68414.m07042 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 465
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 163 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTSNTPSNTESSLTGMTWRRFG 315
G R + + M ++VGD + SKR ++ ++ L +W RFG
Sbjct: 84 GEERMRILSATMEVAGTFVGDISSSKRHLMAFLRNKGFDAGLCKSSWERFG 134
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,157,779
Number of Sequences: 28952
Number of extensions: 386737
Number of successful extensions: 1369
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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