Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30026
(796 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 30 0.44
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 29 0.58
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 29 1.0
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 28 1.3
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 1.8
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 27 2.3
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 27 2.3
SPAC607.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 7.1
SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr... 26 7.1
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.4
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 25 9.4
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 29.9 bits (64), Expect = 0.44
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 344 GLINMAFMSGGVASAFFWGIVGDVFGRK 427
GL+N A G V +G +GD FGRK
Sbjct: 91 GLVNAAANIGNVFGQILFGFMGDFFGRK 118
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 29.5 bits (63), Expect = 0.58
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 344 GLINMAFMSGGVASAFFWGIVGDVFGRK 427
GL+N A G + +G +GD FGRK
Sbjct: 96 GLVNAASNIGNIFGQLMFGFMGDFFGRK 123
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 28.7 bits (61), Expect = 1.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 344 GLINMAFMSGGVASAFFWGIVGDVFGRK 427
G++N A G + +G +GD FGRK
Sbjct: 86 GVVNAATNIGNIMGQLLFGFLGDFFGRK 113
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 344 GLINMAFMSGGVASAFFWGIVGDVFGRK 427
GL+N + G + +G +GD FGRK
Sbjct: 96 GLVNASANIGNIFGQLLFGFMGDFFGRK 123
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 508 AARTINGFIIGGPATLVFTYLSDLVGVKKRQFYLSMVGMSF 630
AAR I G GG + V +SD+V +K+R Y ++ + F
Sbjct: 182 AARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFF 222
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 489 GTVLWAKV-IAASRSNVKLRVLFLPKTSPTIPQKNALATPPLIKAMLINPAWY 334
G +L++ V IAA R +VK L +S I ++ LAT L+ A+ + P Y
Sbjct: 407 GAILFSPVFIAAHRISVKKAAAALKASSVKIQGRDILATWKLLVALGMTPILY 459
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 450 SNVKLRVLFLPKT-SPTIPQKNALATPPLIKAMLINPAWYVVSCSSHLA 307
S+ KL LPKT + IPQ NAL T P I+ + + S H++
Sbjct: 32 SSEKLNRASLPKTQNSAIPQSNALNTTPNESTSQIDSSPKIPSAVPHIS 80
>SPAC607.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 143
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = -2
Query: 549 SWTSYNEPIDGSSCSRSL*SGTVLWAKVIAASRSNVKLRVLFLPKTSPTIPQKNALATPP 370
+W P S+ +L + + +V A + + F+ TS T+P N A PP
Sbjct: 49 TWNFLKNPFSNSAKFEALDADDMWDTRVEEAELNTIPSASPFIDHTSETVPFVNTEAPPP 108
Query: 369 LIKA 358
+ +
Sbjct: 109 RLSS 112
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 548 LHWSSRIYQT*LELRRDNS 604
+HW+S +YQ L L+ +NS
Sbjct: 381 VHWNSTVYQELLNLKSNNS 399
>SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 68 NIFFFSLTQNNGSENRPENRKPH 136
N+F F LT+ NG N+PE+ + H
Sbjct: 126 NLFEFFLTRKNG--NKPEDERDH 146
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 741 QARNNLHGVNWQERWIVRDFKWNHHPGECRQK 646
Q + L G++ QERWI + +++ + E QK
Sbjct: 274 QGGDPLQGISPQERWIDKKEEYDKYEWELEQK 305
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 174 LRWHLVRLPCLCE 136
L W +V LPCLCE
Sbjct: 598 LEWPVVFLPCLCE 610
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,514,162
Number of Sequences: 5004
Number of extensions: 77665
Number of successful extensions: 200
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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