Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30019
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical pr... 32 0.47
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 0.63
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 31 0.83
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 31 0.83
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.83
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 31 0.83
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.83
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.1
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 30 1.9
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 30 1.9
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 30 1.9
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.5
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 2.5
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 3.3
AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical ... 29 3.3
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 4.4
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 4.4
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 28 5.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 7.7
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 28 7.7
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 28 7.7
>Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical
protein W09C5.5 protein.
Length = 722
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 150 RCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSP 281
RC C P P + P RP LP P + G PVA ++P
Sbjct: 139 RCSNAARNNCGAPGAPGAQPSRPPILPPIPTTPTGFPVAALSTP 182
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Frame = +3
Query: 129 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCL-PR------GPCSVPGAPVAYHTSP 281
P P P C C P +P P V G P C P GP P AP+ + P
Sbjct: 59 PPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPP 116
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 7/58 (12%)
Frame = +3
Query: 129 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCL-PR------GPCSVPGAPVAYHTSP 281
P P P C C P P P V G P C P GP P AP+ + P
Sbjct: 87 PPPCFGPACPPPCFGPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPP 144
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 129 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVP 251
P P P C C P P P V G P C GP P
Sbjct: 115 PPPCFGPACPPPCFGPACAPSAPIIVNGPPPCF--GPACPP 153
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 174 PCSLPRGPCSVPGRPSCLPRGPCSVPGA 257
P PR PC P R C P G C GA
Sbjct: 1925 PSPPPRHPCQDPERNDCHPAGTCRATGA 1952
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 174 PCSLPRGPCSVPGRPSCLPRGPCSVPGA 257
P PR PC P R C P G C GA
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTCRATGA 2536
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 174 PCSLPRGPCSVPGRPSCLPRGPCSVPGA 257
P PR PC P R C P G C GA
Sbjct: 1925 PSPPPRHPCQDPERNDCHPAGTCRATGA 1952
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 174 PCSLPRGPCSVPGRPSCLPRGPCSVPGA 257
P PR PC P R C P G C GA
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTCRATGA 2536
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.83
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPR-GPCSVPGAPVAYHTSP 281
P++ +C+ CC P P GP VPG+P R G PG P T+P
Sbjct: 94 PSANLQCEG-CCLPG--PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAP 140
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 174 PCSLPRGPCSVPGRPSCLPRGPCSVPGA 257
P PR PC P R C P G C GA
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTCRATGA 2536
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.83
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPR-GPCSVPGAPVAYHTSP 281
P++ +C+ CC P P GP VPG+P R G PG P T+P
Sbjct: 94 PSANLQCEG-CCLPG--PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAP 140
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 129 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSP 281
P P AP +CC R PC R C P G C G P Y+ +P
Sbjct: 146 PPPPPAPEAPTQCCGSQPYGRTPC----RSGC-PNGDCGC-GRPCCYYQNP 190
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = +3
Query: 39 CFGRGVESWTSGCSRALLSR*SRFFPKHCAP*PASAPRCQARCCYPCSLPRGPCSVPGRP 218
C G + S CS + S + P C P P P+ CC P GPC P P
Sbjct: 44 CSGCDLFPNRSCCSSSCCSS-QKPIPLACCP-PPPPPK---PCCQPAF---GPCC-PATP 94
Query: 219 SCLPRGPC 242
+C P+ PC
Sbjct: 95 NCCPK-PC 101
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQNI 323
AP CQ +C C+LP P + SC C P + + +S +
Sbjct: 270 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 329
Query: 324 V 326
V
Sbjct: 330 V 330
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQNI 323
AP CQ +C C+LP P + SC C P + + +S +
Sbjct: 271 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 330
Query: 324 V 326
V
Sbjct: 331 V 331
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQNI 323
AP CQ +C C+LP P + SC C P + + +S +
Sbjct: 186 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 324 V 326
V
Sbjct: 246 V 246
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGP-CSVPGAPVAYHTSPLRYSSAESVSSQN 320
AP CQ +C C+LP P + SC P C AP + + +S
Sbjct: 309 APVCQQQCAPQCTLPSAPVCQQCQTSCQQFAPVCQEQCAPQCQQPAAPQCQQCQSACQSP 368
Query: 321 IV 326
++
Sbjct: 369 VI 370
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQNI 323
AP CQ +C C+LP P + SC C P + + +S +
Sbjct: 410 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCHQQCIPQCQQPAAPQCQQCQSACQSPV 469
Query: 324 V 326
V
Sbjct: 470 V 470
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 144 APRCQARC-CYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQN 320
AP CQ C C P + R S P R +C+PRG C + +Y + S +
Sbjct: 318 APGCQPGCICLPGYIRRD--SSP-RSACVPRGLCQAYDLTIRCADEKRQYQTCGSACPIS 374
Query: 321 IVRHDQPQ 344
+QP+
Sbjct: 375 CATRNQPR 382
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 144 APRCQARC-CYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQN 320
AP CQ C C P + R S P R +C+PRG C + +Y + S +
Sbjct: 109 APGCQPGCICLPGYIRRD--SSP-RSACVPRGLCQAYDLTIRCADEKRQYQTCGSACPIS 165
Query: 321 IVRHDQPQ 344
+QP+
Sbjct: 166 CATRNQPR 173
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQNI 323
AP CQ +C C+LP P + SC C P + + +S +
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 324 V 326
V
Sbjct: 246 V 246
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQNI 323
AP CQ +C C+LP P + SC C P + + +S +
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 324 V 326
V
Sbjct: 246 V 246
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 168 CYPCSLPRGPCSVPGRPSCLPRGPCSVPGAP 260
C+ C P GP PG+ P+GP PGAP
Sbjct: 183 CFDC--PTGPPGPPGKQG--PKGPNGEPGAP 209
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 168 CYPCSLPRGPCSVPGRPSCLPRGPCSVPGAP 260
C+ C P GP G P P+GP PGAP
Sbjct: 138 CFEC--PPGPAGNAGNPG--PKGPPGQPGAP 164
>AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical
protein C02H6.1 protein.
Length = 334
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 159 ARCCYPCS-LPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSS 296
ARC LP G LP P +PG P AYH PL+ S
Sbjct: 247 ARCLASMGILPSDTRDNDGSCRFLPFRPSEMPGIPEAYHYYPLKNGS 293
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +3
Query: 129 P*PASAPRCQARCCYPCSLPRGPCSVPG-RPS-CLPRGPCSVP---GAP 260
P P SAP C C +P PC P RP+ C+ P VP GAP
Sbjct: 154 PPPPSAPAC----CVAAPVPTNPCCQPAPRPAPCVCSAPRPVPCRCGAP 198
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
Frame = +3
Query: 135 PASAPRCQARCCYPCSLPRGPCSVPGRP-----SCLPRGPCSVPGAPVAYHTSPLRYSSA 299
P + P + P S P PC PG+P C VPG P + H+S +
Sbjct: 41 PCAVPSSNSVIWLPASRP--PCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEG 98
Query: 300 ES--VSSQNIVRHDQPQTIQY 356
E ++ + I D P Y
Sbjct: 99 EGLLLTKERICFFDGPIDFHY 119
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
Frame = +3
Query: 135 PASAPRCQARCCYPCSLPRGPCSVPGRP-----SCLPRGPCSVPGAPVAYHTSPLRYSSA 299
P + P + P S P PC PG+P C VPG P + H+S +
Sbjct: 41 PCAVPSSNSVIWLPASRP--PCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEG 98
Query: 300 ES--VSSQNIVRHDQPQTIQY 356
E ++ + I D P Y
Sbjct: 99 EGLLLTKERICFFDGPIDFHY 119
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
Frame = +3
Query: 135 PASAPRCQARCCYPCSLPRGPCSVPGRP-----SCLPRGPCSVPGAPVAYHTSPLRYSSA 299
P + P + P S P PC PG+P C VPG P + H+S +
Sbjct: 41 PCAVPSSNSVIWLPASRP--PCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEG 98
Query: 300 ES--VSSQNIVRHDQPQTIQY 356
E ++ + I D P Y
Sbjct: 99 EGLLLTKERICFFDGPIDFHY 119
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/61 (22%), Positives = 21/61 (34%)
Frame = +3
Query: 144 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAPVAYHTSPLRYSSAESVSSQNI 323
AP CQ +C C+ P P + SC C P + + +S +
Sbjct: 186 APVCQQQCAPQCTFPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 324 V 326
V
Sbjct: 246 V 246
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 265 PTTLLHSATPRLNLSRPKTSSVMTSP 342
PTT L ++T + + P TS+V TSP
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTSP 453
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 265 PTTLLHSATPRLNLSRPKTSSVMTSP 342
PTT L ++T + + P TS+V TSP
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTSP 453
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 109 KRLQRESSAREQPEVQLSTPRPKHT 35
+++QRE+ REQ Q S P P HT
Sbjct: 548 QQVQRENLNREQYSTQSSQPHPPHT 572
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 135 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGAP 260
P++ P + C S P GP G P GP +PG P
Sbjct: 137 PSAGPGDKCNCNTENSCPAGPAGPKGTPG--HDGPDGIPGVP 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,772,429
Number of Sequences: 27780
Number of extensions: 242611
Number of successful extensions: 934
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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