Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30014
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 147 5e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 4e-35
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 122 3e-28
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 105 2e-23
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 8e-22
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 38 0.008
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 34 0.10
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 34 0.10
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 30 1.3
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 30 1.3
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 2.2
SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_2785| Best HMM Match : ATP-synt_F (HMM E-Value=0.15) 29 2.2
SB_51308| Best HMM Match : ATP-synt_F (HMM E-Value=0.14) 29 2.2
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_48890| Best HMM Match : DUF560 (HMM E-Value=5.2) 29 3.0
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 29 3.0
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 29 3.9
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 6.9
SB_35714| Best HMM Match : Vicilin_N (HMM E-Value=5) 27 9.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 147 bits (357), Expect = 5e-36
Identities = 78/142 (54%), Positives = 98/142 (69%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQPGVLIQVFEGER+MT NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 433 YSDNQPGVLIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 492
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
++KST KEN+ + K ++ + + +Q++ IQ + + S
Sbjct: 493 VDKSTGKENKITITNDKGRLSKEDIERMVNEASKYKEEDEKQRDRIQTKNSLESYAYSM- 551
Query: 407 SATMEDEKLKEKILLNSDKQTI 472
+T+ED+K+K+KI DK+ I
Sbjct: 552 KSTVEDDKVKDKI-SEEDKKAI 572
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 144 bits (350), Expect = 4e-35
Identities = 74/148 (50%), Positives = 99/148 (66%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQ VLIQV+EGER++TKDNNLLGKFEL+GIPPAPRGVPQI+VTFD+D+NGILNVSA
Sbjct: 525 YSDNQTSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSA 584
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
++KST KEN+ + K ++ + + +E IQ + + S
Sbjct: 585 VDKSTGKENKITITNDKGRLSKEDIERMVKEAEKFKAADEAVRERIQSKNSLESYAFSM- 643
Query: 407 SATMEDEKLKEKILLNSDKQTIPRTSAT 490
+TMEDEK+K+K+ + ++ I R AT
Sbjct: 644 KSTMEDEKVKDKLSEDEREKVISRCKAT 671
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 122 bits (293), Expect = 3e-28
Identities = 69/142 (48%), Positives = 87/142 (61%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQP V I+VFEGER +TK NNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 432 YSDNQPAVTIRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSA 491
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+KST K + K ++ + ++ Q+E I + +
Sbjct: 492 KDKSTGKTGSITITNDKGRLSKEEIDRMINDAEKYKSEDEAQREKIAARNRLESYAFGVK 551
Query: 407 SATMEDEKLKEKILLNSDKQTI 472
SA + + L+ K L SDK T+
Sbjct: 552 SA-ISEPSLEGK-LSQSDKDTV 571
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 105 bits (253), Expect = 2e-23
Identities = 65/142 (45%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+DNQ V IQVFEGER MTKDN+ LGKF+L GIPPAPRGVPQIEVTF+ID NGIL VSA
Sbjct: 1127 ADNQNTVTIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAE 1186
Query: 230 EKST-NKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+K T NKE + ++P + ++ + + KE ++ + + S
Sbjct: 1187 DKGTGNKEKITITNDQNRLTPEDIERMVNDAEKFAD-EDKKTKEKVEARNELESYAYSLK 1245
Query: 407 SATMEDEKLKEKILLNSDKQTI 472
+ + EKL K L DK+TI
Sbjct: 1246 NQVGDKEKLGGK-LSEDDKKTI 1266
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 100 bits (240), Expect = 8e-22
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+D Q V I+VF+GER M DN LLG+F+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA
Sbjct: 238 ADGQTQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSAR 297
Query: 230 EKSTNKENR 256
+K T +E +
Sbjct: 298 DKGTGREQQ 306
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 250 EQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
EQ + G LSK+ IE M+ EAEKY D + K
Sbjct: 304 EQQIVIQSSGGLSKDAIENMIKEAEKYAEADKQKK 338
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFEL 139
+D Q V I+VF+GER M DN LLG+F+L
Sbjct: 183 ADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 229 REVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNE 339
+E+ + EQ+T D G + EE++R+ NE EK +NE
Sbjct: 118 KEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 229 REVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNE 339
+E+ + EQ+T D G + EE++R+ NE EK +NE
Sbjct: 118 KEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 225 LSRSPPTRRTDHHYQRQRS 281
LSR P R DHHY RQRS
Sbjct: 2108 LSRVTPLFRPDHHYNRQRS 2126
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 211 PQRFRYREVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDK 348
P + +++ QQ EQ+ + ++ R ++EE R EAE R E D+
Sbjct: 425 PNKALVKQMQQQLEQLKLEEERQRQAEEEKIRQREEAEARRLEKDR 470
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 226 YREVHQQGEQITITNDKGRLSKEEIERMVNEAE-KYRNEDDKAKG 357
Y + +Q +I + N+ + SKE++ER V AE + R+ D + KG
Sbjct: 1030 YDKTRRQLNKILVENENLKGSKEDLERRVVVAENRLRDTDSEMKG 1074
>SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 80 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKE 250
+FE ++ + + + G EL PPA V ++E +F+ +G+++ + S+ +E
Sbjct: 125 IFEPRESVPRQSQVPGAMELLPPPPAVFNVNEVETSFEELKSGLMSSGNSDMSSLEE 181
>SB_2785| Best HMM Match : ATP-synt_F (HMM E-Value=0.15)
Length = 379
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 277 GRLSKEEIERMVNEAEKYRNEDDKAKGDH-PGPRMHWNLTGFSMK 408
GR+S EE ++ E E+Y D + H P PR + G S+K
Sbjct: 313 GRISDEEFRLILKEQERYNTLKDAIRARHGPAPRDEKSGKGPSLK 357
>SB_51308| Best HMM Match : ATP-synt_F (HMM E-Value=0.14)
Length = 246
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 277 GRLSKEEIERMVNEAEKYRNEDDKAKGDH-PGPRMHWNLTGFSMK 408
GR+S EE ++ E E+Y D + H P PR + G S+K
Sbjct: 157 GRISDEEFRLILQEQERYNTLKDAIRARHGPAPRDEKSGKGPSLK 201
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 290 RKRSSVWLMRQRSTETRMTRQKETIQGQECIGIL 391
R+ W R +ST TR K +QG +CI +L
Sbjct: 1120 RRDGYTWKKRTKSTTTREDHFKLKVQGIDCISVL 1153
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +2
Query: 131 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVW 310
FE+ GI P + + + D +N NVS+ EKS + + P TT + ++RS
Sbjct: 157 FEMLGISPEKKD----KDSDDSSSNSNTNVSSDEKSPKADRKRP-KTTSLDELKRRSKKT 211
Query: 311 LMRQRSTETRMTRQK 355
+R T + TR +
Sbjct: 212 RSPERRTMSAKTRSQ 226
>SB_48890| Best HMM Match : DUF560 (HMM E-Value=5.2)
Length = 122
Score = 29.1 bits (62), Expect = 3.0
Identities = 26/93 (27%), Positives = 37/93 (39%)
Frame = +3
Query: 231 RSPPTRRTDHHYQRQRSSLQGRDRAYG**GREVQKRG*QGKRRPSRAKNALESYWLQHEV 410
+S RRTD + Q+ R G+D GR G K+ P + WL H+
Sbjct: 18 KSGNARRTDRNSQKDRGIDDGKDEEDR--GRPPSSGGCTKKKSPDKR------SWLYHKS 69
Query: 411 LPWRMRSSRKRFS*TLTSRPFLEQVQHPPIQVD 509
L +R + R + T RP + P VD
Sbjct: 70 LCDTLRILKTRSNLTWNKRPGMYMFDEPNDAVD 102
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 187 LRHRCQRYPQRFRY-REVHQQGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDH 363
L+ R +R +++ + RE + D GR ++EE ER + + +E D++ G+
Sbjct: 941 LKPREEREKEQYEHTRETARSDYPTDRYPDDGRYTREEWERQEEDWRQRWDEWDRSTGER 1000
Query: 364 PGPRMHWNLTG 396
P +W+ G
Sbjct: 1001 GPPPPYWDEHG 1011
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 158 PRGVPQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTK 277
P GV + ++ I +G+L+V A++KS + P TK
Sbjct: 56 PEGVDESSISTRIAEDGMLHVEALKKSPPATTENKAPATK 95
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = -2
Query: 214 EDTVGIDVEGDLNLRHATRRRWDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGEC 35
ED VGID EG+L++R R Q + T + TLK L + ++ G+
Sbjct: 402 EDDVGIDDEGNLHIRSVGRFNEGTYQCKATRLAGASSTAAFTLKILALNTPTILSAKGKA 461
Query: 34 LSLFSGDGSVT 2
S D VT
Sbjct: 462 -SFGPRDADVT 471
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 159 GAGGIPVSSNLPSKLLSLVIARSPSNTWM 73
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 9 LPSPLNRLRHSPPTLITNP 65
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_35714| Best HMM Match : Vicilin_N (HMM E-Value=5)
Length = 288
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +1
Query: 157 AAWRASN*GHLRHRCQ-----RYPQRFRYREVHQQGEQITITNDKGRLSKE-EIERMVNE 318
A +RA GH+ R Q R P + REV +QGE + D L+ E E E + +
Sbjct: 156 ACFRAGLRGHVHPRPQEGTDVRLPLQLHQREVRRQGEARLLFTDTDSLTYEIETEDVYQD 215
Query: 319 AEKYRNEDDKA-KGDHP 366
+ NE D+ D+P
Sbjct: 216 ---FWNEKDRLDNSDYP 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,781,867
Number of Sequences: 59808
Number of extensions: 464101
Number of successful extensions: 1518
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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