Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30014
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 144 6e-35
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 140 9e-34
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 126 9e-30
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 126 9e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 125 2e-29
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 111 4e-25
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 111 4e-25
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 99 3e-21
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 97 1e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 97 1e-20
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 51 6e-07
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 51 6e-07
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 40 0.002
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 31 0.86
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 31 0.86
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical p... 30 1.1
Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical p... 30 1.1
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 30 1.1
AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic s... 30 1.1
AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic s... 30 1.1
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 30 1.1
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z72516-1|CAA96687.2| 156|Caenorhabditis elegans Hypothetical pr... 28 4.6
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 28 4.6
Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical p... 28 6.0
AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.0
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 28 6.0
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 28 6.0
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 27 8.0
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 8.0
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 8.0
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 144 bits (348), Expect = 6e-35
Identities = 76/133 (57%), Positives = 91/133 (68%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 432 YSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSA 491
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+KST K+N+ + K + + + QK+ I + + +
Sbjct: 492 TDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNL- 550
Query: 407 SATMEDEKLKEKI 445
T+EDEKLK+KI
Sbjct: 551 KQTIEDEKLKDKI 563
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 140 bits (338), Expect = 9e-34
Identities = 75/133 (56%), Positives = 89/133 (66%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 432 YSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSA 491
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQECIGILLASA* 406
+KST K + + K + + + QK+ I + + +
Sbjct: 492 TDKSTGKAKQITITNDKDRFSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNL- 550
Query: 407 SATMEDEKLKEKI 445
T+EDEKLK+KI
Sbjct: 551 KQTIEDEKLKDKI 563
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 126 bits (305), Expect = 9e-30
Identities = 63/109 (57%), Positives = 76/109 (69%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 432 YADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSA 491
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQ 373
+KST K NR + K + + + E Q+E +Q +
Sbjct: 492 EDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQAR 540
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 126 bits (305), Expect = 9e-30
Identities = 63/109 (57%), Positives = 76/109 (69%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 432 YADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSA 491
Query: 227 IEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQKETIQGQ 373
+KST K NR + K + + + E Q+E +Q +
Sbjct: 492 EDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQAR 540
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 125 bits (302), Expect = 2e-29
Identities = 57/77 (74%), Positives = 66/77 (85%)
Frame = +2
Query: 47 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 226
Y+DNQPGV IQV+EGERAMT+DN+ LG FELTGIPPAPRGVPQ++VTFDIDANGILNVSA
Sbjct: 432 YADNQPGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSA 491
Query: 227 IEKSTNKENRSPLPTTK 277
+KST + NR + K
Sbjct: 492 ADKSTGRSNRITIRNEK 508
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 244 QGEQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDHPGPRMHWNLTGFSMK 408
+ +ITI N+KGRLS+ +I+RMVNEA+++ E D A+ D R F +K
Sbjct: 498 RSNRITIRNEKGRLSQADIDRMVNEAKQFERE-DAAQRDRISSRNQLEAYAFQVK 551
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 111 bits (267), Expect = 4e-25
Identities = 50/69 (72%), Positives = 60/69 (86%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+DNQP V IQVFEGER MTKDN+ LGKF+LTG+PPAPRGVPQIEVTF+ID NGIL+V+A
Sbjct: 460 ADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAE 519
Query: 230 EKSTNKENR 256
+K T +N+
Sbjct: 520 DKGTGNKNK 528
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +1
Query: 253 QITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
+ITITND+ RLS E+IERM+N+AEK+ +D K K
Sbjct: 528 KITITNDQNRLSPEDIERMINDAEKFAEDDKKVK 561
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 111 bits (267), Expect = 4e-25
Identities = 50/69 (72%), Positives = 60/69 (86%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+DNQP V IQVFEGER MTKDN+ LGKF+LTG+PPAPRGVPQIEVTF+ID NGIL+V+A
Sbjct: 460 ADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAE 519
Query: 230 EKSTNKENR 256
+K T +N+
Sbjct: 520 DKGTGNKNK 528
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +1
Query: 253 QITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
+ITITND+ RLS E+IE M+N+AEK+ +D K K
Sbjct: 528 KITITNDQNRLSPEDIEAMINDAEKFAEDDKKVK 561
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 98.7 bits (235), Expect = 3e-21
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+D Q V I+VF+GER M N LLG+F L GIPPAPRGVPQ+EVTFDIDANGI+NVSA
Sbjct: 455 ADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSAR 514
Query: 230 EKSTNKENR 256
++ T KE +
Sbjct: 515 DRGTGKEQQ 523
Score = 35.5 bits (78), Expect = 0.030
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 250 EQITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
EQ + G LSK++IE M+ EAEK ED K K
Sbjct: 521 EQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRK 555
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/69 (62%), Positives = 55/69 (79%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+D+Q V I ++EGER M DN+ LG F++TGIPPAPRGVPQIEVTF+ID NGIL+VSA
Sbjct: 88 ADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAE 147
Query: 230 EKSTNKENR 256
+K T +N+
Sbjct: 148 DKGTGNKNK 156
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +1
Query: 253 QITITNDKGRLSKEEIERMVNEAEKYRNEDDKAK 354
++TITND RLS E+IERM+N+A+K+ +D K
Sbjct: 156 KLTITNDHNRLSPEDIERMINDADKFAADDQAQK 189
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/69 (62%), Positives = 55/69 (79%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 229
+D+Q V I ++EGER M DN+ LG F++TGIPPAPRGVPQIEVTF+ID NGIL+VSA
Sbjct: 457 ADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAE 516
Query: 230 EKSTNKENR 256
+K T +N+
Sbjct: 517 DKGTGNKNK 525
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 253 QITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKGDHPGPRMHWNLTGFSMK 408
++TITND RLS E+IERM+N+A+K+ DD+A+ + R + MK
Sbjct: 525 KLTITNDHNRLSPEDIERMINDADKFA-ADDQAQKEKVESRNELEAYAYQMK 575
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +2
Query: 53 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIE 232
D Q + + V+EGER + N LG+ L I P RG +++T ++D NGIL +A++
Sbjct: 429 DFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGILQATALD 487
Query: 233 KSTNK 247
+T K
Sbjct: 488 LNTKK 492
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +2
Query: 53 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIE 232
D Q + + V+EGER + N LG+ L I P RG +++T ++D NGIL +A++
Sbjct: 429 DFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGILQATALD 487
Query: 233 KSTNK 247
+T K
Sbjct: 488 LNTKK 492
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 50 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGI 148
+D Q V I+VF+GER M N LLG+F L GI
Sbjct: 455 ADGQTQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.86
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 170 PQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTR 349
PQ +V D LN + K N R + T+ + +KR + WL Q+ R
Sbjct: 130 PQSDVVTSPDIQNALNSATSSKCNNGGARCQM-TSPAAASKKRVNAWLKEQQEAAAEQQR 188
Query: 350 QKET 361
+ +T
Sbjct: 189 RAQT 192
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 30.7 bits (66), Expect = 0.86
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 170 PQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTR 349
PQ +V D LN + K N R + T+ + +KR + WL Q+ R
Sbjct: 152 PQSDVVTSPDIQNALNSATSSKCNNGGARCQM-TSPAAASKKRVNAWLKEQQEAAAEQQR 210
Query: 350 QKET 361
+ +T
Sbjct: 211 RAQT 214
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 158 PRGVPQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTT 274
P+G+P+IEV D + + + + + N + +S LP T
Sbjct: 672 PKGIPEIEVDKDFELHNDIKIPKVPNDDNYKPKSFLPIT 710
>Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical
protein T05C12.6c protein.
Length = 625
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 173 QIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQ 352
++E T ++ G A+ + L TT +SP WL R+R E+ MT
Sbjct: 481 RVEATTEVTYVGSPAPHALAARVGRNIPHRLETT-TLSPVAHDQTWLRRRRDCESPMTND 539
Query: 353 KETIQGQECIGI 388
++ G+ IG+
Sbjct: 540 YASMVGESQIGM 551
>Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical
protein T05C12.6b protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 173 QIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQ 352
++E T ++ G A+ + L TT +SP WL R+R E+ MT
Sbjct: 522 RVEATTEVTYVGSPAPHALAARVGRNIPHRLETT-TLSPVAHDQTWLRRRRDCESPMTND 580
Query: 353 KETIQGQECIGI 388
++ G+ IG+
Sbjct: 581 YASMVGESQIGM 592
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 173 QIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQ 352
++E T ++ G A+ + L TT +SP WL R+R E+ MT
Sbjct: 522 RVEATTEVTYVGSPAPHALAARVGRNIPHRLETT-TLSPVAHDQTWLRRRRDCESPMTND 580
Query: 353 KETIQGQECIGI 388
++ G+ IG+
Sbjct: 581 YASMVGESQIGM 592
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 158 PRGVPQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTT 274
P+G+P+IEV D + + + + + N + +S LP T
Sbjct: 672 PKGIPEIEVDKDFELHNDIKIPKVPNDDNYKPKSFLPIT 710
>AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 173 QIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQ 352
++E T ++ G A+ + L TT +SP WL R+R E+ MT
Sbjct: 410 RVEATTEVTYVGSPAPHALAARVGRNIPHRLETT-TLSPVAHDQTWLRRRRDCESPMTND 468
Query: 353 KETIQGQECIGI 388
++ G+ IG+
Sbjct: 469 YASMVGESQIGM 480
>AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 173 QIEVTFDIDANGILNVSAIEKSTNKENRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTRQ 352
++E T ++ G A+ + L TT +SP WL R+R E+ MT
Sbjct: 522 RVEATTEVTYVGSPAPHALAARVGRNIPHRLETT-TLSPVAHDQTWLRRRRDCESPMTND 580
Query: 353 KETIQGQECIGI 388
++ G+ IG+
Sbjct: 581 YASMVGESQIGM 592
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 158 PRGVPQIEVTFDIDANGILNVSAIEKSTNKENRSPLPTT 274
P+G+P+IEV D + + + + + N + +S LP T
Sbjct: 672 PKGIPEIEVDKDFELHNDIKIPKVPNDDNYKPKSFLPIT 710
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = -3
Query: 288 GETTFVVGNGDLFSLLVDFSIAETLRIPLASMSKVTSI*GTPRGAGG 148
GE F V GD + LV IA L + SKV S+ T RGAGG
Sbjct: 441 GENDFEVKKGDRIAQLVCEQIA------LCTYSKVESLEVTERGAGG 481
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 279 TFVVGNGDLFSLLVD-FSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLV 103
T ++G G L L+V+ F +A+ + +PL + + GTP G+ +S K L
Sbjct: 58 TNMLGGGMLSELVVNPFGVAKNIGVPLEDLGINKTDFGTPLDLPGMNGTSKAAFKFLDAF 117
Query: 102 IARSPS 85
++ P+
Sbjct: 118 TSQPPT 123
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 279 TFVVGNGDLFSLLVD-FSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLV 103
T ++G G L L+V+ F +A+ + +PL + + GTP G+ +S K L
Sbjct: 58 TNMLGGGMLSELVVNPFGVAKNIGVPLEDLGINKTDFGTPLDLPGMNGTSKAAFKFLDAF 117
Query: 102 IARSPS 85
++ P+
Sbjct: 118 TSQPPT 123
>Z72516-1|CAA96687.2| 156|Caenorhabditis elegans Hypothetical
protein T25G3.1 protein.
Length = 156
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 253 QITITNDKGRLSKEEIERMVNEAEKYRNEDDKAKG 357
Q+ + N+K L+KEE+E+ + E +K + A+G
Sbjct: 74 QVVVLNEKTDLTKEELEKELEEKKKEEGDKLIAEG 108
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = -3
Query: 288 GETTFVVGNGDLFSLLVDFSIAETLRIPLASMSKVTSI*GTPRGAGG 148
GE F V GD + LV IA L + SKV S+ T RGAGG
Sbjct: 441 GENDFEVKKGDRIAQLVCEQIA------LCTYSKVESLEVTERGAGG 481
>Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical
protein Y57G11C.52 protein.
Length = 96
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 259 TITNDKGRLSKEEIERMVNEAEKYR 333
T N G LSKEE++ M++E+ K R
Sbjct: 70 TCVNGLGCLSKEEVQMMIDESNKPR 94
>AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical
protein K02D7.2 protein.
Length = 193
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 181 GHLRHRCQRYPQRFRYREVHQQGEQITITNDK-GRLSKEEIE 303
G +HRC R Q F +V Q+ EQ G KE++E
Sbjct: 148 GEKKHRCSRCGQSFARVQVRQRHEQCCRGGGSGGEAEKEDVE 189
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 274 KGRLSKEEIERMVNEAEKYRNEDDKAKGD 360
K +LSKEEI+ +V + E +N + AK D
Sbjct: 295 KSKLSKEEIDEIVAQVEGNKNIEKPAKYD 323
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Frame = +1
Query: 151 TGAAWRASN*GHLRH----RCQRYPQRF---RYREVHQQGEQITITNDKGRLSKEEIERM 309
+G W + G+LR CQR QR + Q EQI ++GR ++++ +
Sbjct: 55 SGEFWHSGTRGNLRQASSAECQRLLQRTDEAAKQSAAAQEEQIEKLAEQGRKKDDKLKEL 114
Query: 310 VNEAEKYRNEDDKAKGD 360
N AE + + + D
Sbjct: 115 ENNAEALKTQLQEQTND 131
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 228 SRSPPTRRTDHHYQRQRSSLQGRDRAY 308
SRSP RRT + RSS + RDR++
Sbjct: 47 SRSPSRRRTSRDRRDDRSSRRRRDRSH 73
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 228 SRSPPTRRTDHHYQRQRSSLQGRDRAY 308
SRSP RRT + RSS + RDR++
Sbjct: 75 SRSPSRRRTSRDRRDDRSSRRRRDRSH 101
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 228 SRSPPTRRTDHHYQRQRSSLQGRDRAY 308
SRSP RRT + RSS + RDR++
Sbjct: 133 SRSPSRRRTSRDRRDDRSSRRRRDRSH 159
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 228 SRSPPTRRTDHHYQRQRSSLQGRDRAY 308
SRSP RRT + RSS + RDR++
Sbjct: 134 SRSPSRRRTSRDRRDDRSSRRRRDRSH 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,210
Number of Sequences: 27780
Number of extensions: 328224
Number of successful extensions: 1266
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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