Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30005
         (981 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   4.6  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    25   4.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   8.0  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 281 P*KFLPNGYFTGPVRFPGY 225
           P  F P GYFT P+   GY
Sbjct: 34  PGSFDPQGYFTPPIANVGY 52


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 331 GGHGGGTTVRSLAPVLGRAW*KVER 405
           GG GGG  VR   P+L     ++ER
Sbjct: 106 GGLGGGAVVREALPILNGMGEELER 130


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 877 ELSWKFXWWLLNKSW 921
           E SW +  WLL+++W
Sbjct: 116 EFSWLWLLWLLSQTW 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 945,534
Number of Sequences: 2352
Number of extensions: 19641
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)