Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30005
(981 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062786-1|AAY56659.1| 489|Drosophila melanogaster Erp60 protein. 42 0.002
AY060296-1|AAL25335.1| 364|Drosophila melanogaster GH13982p pro... 42 0.002
AE013599-1356|AAM68697.1| 364|Drosophila melanogaster CG8983-PB... 42 0.002
AE013599-1355|AAF58609.2| 489|Drosophila melanogaster CG8983-PA... 42 0.002
>DQ062786-1|AAY56659.1| 489|Drosophila melanogaster Erp60 protein.
Length = 489
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +1
Query: 49 LNEFGIDFAKGDKPVVAGRDADGKQIRHETRSSASKIY*RSQRTCSMGKLEPFVKFRGP* 228
LNE+G DF GDKPVV RD + + S + ++ + +LEP++K P
Sbjct: 302 LNEYGYDFV-GDKPVVLARDEKNLKYALKDEFSVENLQDFVEKLLA-NELEPYIKSE-PI 358
Query: 229 PGKRTGPVK*PFGKNF 276
P PVK KNF
Sbjct: 359 PESNDAPVKVAVAKNF 374
Score = 32.3 bits (70), Expect = 1.0
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 2/191 (1%)
Frame = +3
Query: 3 EATFAVSDKDDFTHAAQXXXXXXXXXXXXXXXXXXXXXQTNSS*DAEFSIENLLTFTKDL 182
+ FA++ KDDF H + + EFS+ENL F + L
Sbjct: 287 QINFAIASKDDFQH--ELNEYGYDFVGDKPVVLARDEKNLKYALKDEFSVENLQDFVEKL 344
Query: 183 LDGQAGA-IREIPRAITGKTNGPSEVAVRQELSRKLVHGQQQGRNFIEFLWRPWWRNNCQ 359
L + I+ P I + P +VAV + +++ + IEF + PW +C+
Sbjct: 345 LANELEPYIKSEP--IPESNDAPVKVAVAKNFDDLVINNGKD--TLIEF-YAPWC-GHCK 398
Query: 360 KLGSRSGKSLVKS*KMEEVEHSFKIRCKLANGTGPKFTISNVFRAF-PPTNLSGKALKGN 536
KL S + L + K+++ + + AN P+F + F P + K + N
Sbjct: 399 KL-SPIYEELAE--KLQDEDVAIVKMDATANDVPPEFNVRGFPTLFWLPKDAKNKPVSYN 455
Query: 537 SFPKKNPFRDY 569
+ + F Y
Sbjct: 456 GGREVDDFLKY 466
>AY060296-1|AAL25335.1| 364|Drosophila melanogaster GH13982p
protein.
Length = 364
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +1
Query: 49 LNEFGIDFAKGDKPVVAGRDADGKQIRHETRSSASKIY*RSQRTCSMGKLEPFVKFRGP* 228
LNE+G DF GDKPVV RD + + S + ++ + +LEP++K P
Sbjct: 177 LNEYGYDFV-GDKPVVLARDEKNLKYALKDEFSVENLQDFVEKLLA-NELEPYIKSE-PI 233
Query: 229 PGKRTGPVK*PFGKNF 276
P PVK KNF
Sbjct: 234 PESNDAPVKVAVAKNF 249
Score = 32.3 bits (70), Expect = 1.0
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 2/191 (1%)
Frame = +3
Query: 3 EATFAVSDKDDFTHAAQXXXXXXXXXXXXXXXXXXXXXQTNSS*DAEFSIENLLTFTKDL 182
+ FA++ KDDF H + + EFS+ENL F + L
Sbjct: 162 QINFAIASKDDFQH--ELNEYGYDFVGDKPVVLARDEKNLKYALKDEFSVENLQDFVEKL 219
Query: 183 LDGQAGA-IREIPRAITGKTNGPSEVAVRQELSRKLVHGQQQGRNFIEFLWRPWWRNNCQ 359
L + I+ P I + P +VAV + +++ + IEF + PW +C+
Sbjct: 220 LANELEPYIKSEP--IPESNDAPVKVAVAKNFDDLVINNGKD--TLIEF-YAPWC-GHCK 273
Query: 360 KLGSRSGKSLVKS*KMEEVEHSFKIRCKLANGTGPKFTISNVFRAF-PPTNLSGKALKGN 536
KL S + L + K+++ + + AN P+F + F P + K + N
Sbjct: 274 KL-SPIYEELAE--KLQDEDVAIVKMDATANDVPPEFNVRGFPTLFWLPKDAKNKPVSYN 330
Query: 537 SFPKKNPFRDY 569
+ + F Y
Sbjct: 331 GGREVDDFLKY 341
>AE013599-1356|AAM68697.1| 364|Drosophila melanogaster CG8983-PB,
isoform B protein.
Length = 364
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +1
Query: 49 LNEFGIDFAKGDKPVVAGRDADGKQIRHETRSSASKIY*RSQRTCSMGKLEPFVKFRGP* 228
LNE+G DF GDKPVV RD + + S + ++ + +LEP++K P
Sbjct: 177 LNEYGYDFV-GDKPVVLARDEKNLKYALKDEFSVENLQDFVEKLLA-NELEPYIKSE-PI 233
Query: 229 PGKRTGPVK*PFGKNF 276
P PVK KNF
Sbjct: 234 PESNDAPVKVAVAKNF 249
Score = 32.3 bits (70), Expect = 1.0
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 2/191 (1%)
Frame = +3
Query: 3 EATFAVSDKDDFTHAAQXXXXXXXXXXXXXXXXXXXXXQTNSS*DAEFSIENLLTFTKDL 182
+ FA++ KDDF H + + EFS+ENL F + L
Sbjct: 162 QINFAIASKDDFQH--ELNEYGYDFVGDKPVVLARDEKNLKYALKDEFSVENLQDFVEKL 219
Query: 183 LDGQAGA-IREIPRAITGKTNGPSEVAVRQELSRKLVHGQQQGRNFIEFLWRPWWRNNCQ 359
L + I+ P I + P +VAV + +++ + IEF + PW +C+
Sbjct: 220 LANELEPYIKSEP--IPESNDAPVKVAVAKNFDDLVINNGKD--TLIEF-YAPWC-GHCK 273
Query: 360 KLGSRSGKSLVKS*KMEEVEHSFKIRCKLANGTGPKFTISNVFRAF-PPTNLSGKALKGN 536
KL S + L + K+++ + + AN P+F + F P + K + N
Sbjct: 274 KL-SPIYEELAE--KLQDEDVAIVKMDATANDVPPEFNVRGFPTLFWLPKDAKNKPVSYN 330
Query: 537 SFPKKNPFRDY 569
+ + F Y
Sbjct: 331 GGREVDDFLKY 341
>AE013599-1355|AAF58609.2| 489|Drosophila melanogaster CG8983-PA,
isoform A protein.
Length = 489
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +1
Query: 49 LNEFGIDFAKGDKPVVAGRDADGKQIRHETRSSASKIY*RSQRTCSMGKLEPFVKFRGP* 228
LNE+G DF GDKPVV RD + + S + ++ + +LEP++K P
Sbjct: 302 LNEYGYDFV-GDKPVVLARDEKNLKYALKDEFSVENLQDFVEKLLA-NELEPYIKSE-PI 358
Query: 229 PGKRTGPVK*PFGKNF 276
P PVK KNF
Sbjct: 359 PESNDAPVKVAVAKNF 374
Score = 32.3 bits (70), Expect = 1.0
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 2/191 (1%)
Frame = +3
Query: 3 EATFAVSDKDDFTHAAQXXXXXXXXXXXXXXXXXXXXXQTNSS*DAEFSIENLLTFTKDL 182
+ FA++ KDDF H + + EFS+ENL F + L
Sbjct: 287 QINFAIASKDDFQH--ELNEYGYDFVGDKPVVLARDEKNLKYALKDEFSVENLQDFVEKL 344
Query: 183 LDGQAGA-IREIPRAITGKTNGPSEVAVRQELSRKLVHGQQQGRNFIEFLWRPWWRNNCQ 359
L + I+ P I + P +VAV + +++ + IEF + PW +C+
Sbjct: 345 LANELEPYIKSEP--IPESNDAPVKVAVAKNFDDLVINNGKD--TLIEF-YAPWC-GHCK 398
Query: 360 KLGSRSGKSLVKS*KMEEVEHSFKIRCKLANGTGPKFTISNVFRAF-PPTNLSGKALKGN 536
KL S + L + K+++ + + AN P+F + F P + K + N
Sbjct: 399 KL-SPIYEELAE--KLQDEDVAIVKMDATANDVPPEFNVRGFPTLFWLPKDAKNKPVSYN 455
Query: 537 SFPKKNPFRDY 569
+ + F Y
Sbjct: 456 GGREVDDFLKY 466
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,125,553
Number of Sequences: 53049
Number of extensions: 862305
Number of successful extensions: 1998
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1992
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4935487923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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