Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30004
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.99 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   7.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   7.0  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   7.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   7.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.2  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 231 LYFTKKKKNEEKSFIIQNVSLYSL 160
           L+F + +K++ + F+I N+SL SL
Sbjct: 222 LFFFRFEKSKFEPFLISNISLVSL 245


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 83  SVGGPCRSCRIPAAPG 36
           +V  P  SC  PAAPG
Sbjct: 108 AVVDPLNSCSQPAAPG 123


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 83  SVGGPCRSCRIPAAPG 36
           +V  P  SC  PAAPG
Sbjct: 167 AVVDPLNSCSQPAAPG 182


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 83  SVGGPCRSCRIPAAPG 36
           +V  P  SC  PAAPG
Sbjct: 108 AVVDPLNSCSQPAAPG 123


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 83  SVGGPCRSCRIPAAPG 36
           +V  P  SC  PAAPG
Sbjct: 167 AVVDPLNSCSQPAAPG 182


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 666 KLNVNTLYELKKSRSDLL 613
           KLN N  YEL   +SD L
Sbjct: 153 KLNTNESYELTVLKSDSL 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,787
Number of Sequences: 336
Number of extensions: 3299
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)