Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30004
(843 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 25 1.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 4.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.2
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 6.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.1
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 87
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 87 CKCGRAVPLVPNSCSPGGSTSS 22
C+C A P +CS G S+ S
Sbjct: 5 CECDLATPRTGTNCSSGSSSDS 26
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 28 SGSPGAAGIRHERHG 72
+GSPG+ GIR ++ G
Sbjct: 285 NGSPGSGGIRSDQMG 299
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 96 NNYNNYNKHNYNKLY 110
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 329 NNYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 687 NNYFYYHKLNVNTLY 643
NNY Y+K N N LY
Sbjct: 329 NNYNNYNKHNYNKLY 343
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 6.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 95 TVTVSVGGPCRSCRIPAAPGDPLVLERXA 9
+ T SV CR R A +PL+ E+ A
Sbjct: 92 STTTSVTPSCRRQRYNIAAANPLLAEKLA 120
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 42 GCRNSARAARPAHTYS 89
GC SA ARP YS
Sbjct: 10 GCTRSAHFARPGGDYS 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,239
Number of Sequences: 438
Number of extensions: 4453
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -