Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30001
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 64 2e-10
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 62 4e-10
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 62 4e-10
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 62 5e-10
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 61 8e-10
AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical ... 40 0.002
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 32 0.44
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 32 0.44
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 32 0.44
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 31 0.77
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 31 0.77
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 30 2.3
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 30 2.3
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 2.3
Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 29 4.1
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 29 5.4
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF003151-17|ABJ99068.1| 99|Caenorhabditis elegans Hypothetical... 28 9.5
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical protein
F20B4.7 protein.
Length = 891
Score = 63.7 bits (148), Expect = 2e-10
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 2/159 (1%)
Frame = -3
Query: 516 DNTRGIEWSENILEDLDYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRV 337
D G+ + L +L +ADDIVL+ + L++L + GL INT KT +R
Sbjct: 612 DTIPGMRVNGRNLTNLRFADDIVLIANHPNTASKMLQELVQKCSEVGLEINTGKTKVLR- 670
Query: 336 MSKNTTPLKLQDCGFEVSTEVYISGEL--LSNQGGSDEDIEIRIRKARGAFAQLKPVWES 163
++ P K+ +T++ E L+ Q +I R R A AF +K +S
Sbjct: 671 -NRFADPSKVYFGSPSPTTQLDDVDEYIYLNAQNNLMPEIHRRRRAAWAAFIGIKNTTDS 729
Query: 162 SVMTRRIKLTLFDSIVKSVLLFGCETWRVTKTLTNRLQV 46
+ ++I+ LFDSI+ L +G E W TK L+ R+++
Sbjct: 730 -ITDKKIRANLFDSIILPALTYGSEAWTFTKALSERVRI 767
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 707 LKQRGIPNKIIGIIQALYRGSTCRVV-HDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDI 531
L ++G I +++ Y+ T + + P+ T GV+QG +SP LF L+ +
Sbjct: 538 LDEQGADGAYIDLLKECYKNCTTNFTPFHRPVAVPV--TKGVRQGDPISPNLFSACLEHV 595
Query: 530 MREV 519
R++
Sbjct: 596 FRKL 599
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 62.5 bits (145), Expect = 4e-10
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Frame = -3
Query: 516 DNTRGIEWSENILEDLDYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRV 337
D G+ + L +L +ADDIVL+ + L++L + GL INT KT +R
Sbjct: 783 DTIPGMRVNGRNLTNLRFADDIVLIANHPNIASKMLQELVQKCSEVGLEINTGKTKVLR- 841
Query: 336 MSKNTTPLKLQDCGFEVSTEV-----YIS-GELLSNQGGSDEDIEIRIRKARGAFAQLKP 175
++ P K+ +T++ YI G ++ Q +I R R A AF +K
Sbjct: 842 -NRFADPSKVYFGSPSPTTQLDDVDEYIYLGRQINAQNNLMPEIHRRRRAAWAAFNGIKN 900
Query: 174 VWESSVMTRRIKLTLFDSIVKSVLLFGCETWRVTKTLTNRLQV 46
+S + ++I+ LFDSIV L +G E W TK L+ R+++
Sbjct: 901 TTDS-ITDKKIRANLFDSIVLPALTYGSEAWTFTKALSERVRI 942
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 707 LKQRGIPNKIIGIIQALYRGSTCRVV-HDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDI 531
L ++G I +++ Y+ T + + P+ T GV+QG +SP LF L+ +
Sbjct: 709 LDEQGADGAYIDLLKECYKNCTTNFTPFHRPVAVPV--TKGVRQGDPISPNLFSACLEHV 766
Query: 530 MREV 519
R++
Sbjct: 767 FRKL 770
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 62.5 bits (145), Expect = 4e-10
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Frame = -3
Query: 516 DNTRGIEWSENILEDLDYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRV 337
D G+ + L +L +ADDIVL+ + L++L + GL INT KT +R
Sbjct: 522 DTIPGMRVNGRNLTNLRFADDIVLIANHPNIASKMLQELVQKCSEVGLEINTGKTKVLR- 580
Query: 336 MSKNTTPLKLQDCGFEVSTEV-----YIS-GELLSNQGGSDEDIEIRIRKARGAFAQLKP 175
++ P K+ +T++ YI G ++ Q +I R R A AF +K
Sbjct: 581 -NRFADPSKVYFGSPSPTTQLDDVDEYIYLGRQINAQNNLMPEIHRRRRAAWAAFNGIKN 639
Query: 174 VWESSVMTRRIKLTLFDSIVKSVLLFGCETWRVTKTLTNRLQV 46
+S + ++I+ LFDSIV L +G E W TK L+ R+++
Sbjct: 640 TTDS-ITDKKIRANLFDSIVLPALTYGSEAWTFTKALSERVRI 681
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 707 LKQRGIPNKIIGIIQALYRGSTCRVV-HDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDI 531
L ++G I +++ Y+ T + + P+ T GV+QG +SP LF L+ +
Sbjct: 448 LDEQGADGAYIDLLKECYKNCTTNFTPFHRPVAVPV--TKGVRQGDPISPNLFSACLEHV 505
Query: 530 MREV 519
R++
Sbjct: 506 FRKL 509
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 62.1 bits (144), Expect = 5e-10
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Frame = -3
Query: 480 LEDLDYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQD 301
L +L +ADDIVL+ + L++L + GL INT KT +R ++ P K+
Sbjct: 146 LTNLRFADDIVLIANHPNTASKMLQELVQKCSEVGLEINTGKTKVLR--NRFADPSKVYF 203
Query: 300 CGFEVSTEV-----YIS-GELLSNQGGSDEDIEIRIRKARGAFAQLKPVWESSVMTRRIK 139
+T++ YI G ++ Q +I R R A AF +K +S + ++I+
Sbjct: 204 GNPSSTTQLDDVDEYIYLGRQINAQNNLMPEIHRRRRAAWAAFNGIKNTTDS-ITDKKIR 262
Query: 138 LTLFDSIVKSVLLFGCETWRVTKTLTNRLQV 46
LFDSIV L +G E W TK L+ R+++
Sbjct: 263 ANLFDSIVLPALTYGSEAWTFTKALSERVRI 293
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -1
Query: 707 LKQRGIPNKIIGIIQALYRGSTCRVVHDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDIM 528
L ++G I +++ Y+ T + + +T GV+QG +SP LF L+ +
Sbjct: 60 LDEQGADEAYIDLLKECYKNCTTNFT-PFLRPITVPVTKGVRQGDPISPNLFSACLEHVF 118
Query: 527 REV 519
R++
Sbjct: 119 RKL 121
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 61.3 bits (142), Expect = 8e-10
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Frame = -3
Query: 510 TRGIEWSENILEDLDYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMR--- 340
T GI + L +L +ADDIVL+ L +L GL+INT KT +R
Sbjct: 557 TEGIRVNGQNLTNLRFADDIVLVAHNPRTASQMLTELVEKCSSVGLKINTGKTKVLRNRF 616
Query: 339 -------VMSKNTTPLKLQDCGFEVSTEVYISGELLSNQGGSDEDIEIRIRKARGAFAQL 181
+ NTT + + D V+ +Y+ G +++ ++ R R A AF +
Sbjct: 617 AYKRKVEIRCPNTTNIIIDD----VNEYIYL-GRQINDSNNLLPELHRRRRAAWAAFTNI 671
Query: 180 KPVWESSVMTRRIKLTLFDSIVKSVLLFGCETWRVTKTLTNRLQV 46
K + + R++ LFDS V L +G E W TK L R++V
Sbjct: 672 KSTTDQ-ITCPRLRANLFDSTVLPALTYGSEAWTFTKELAERVRV 715
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -1
Query: 707 LKQRGIPNKIIGIIQALYR--GSTCRVVHDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDD 534
L+Q+G+ I ++Q Y +T H V + +T GV+QG +SP LF L+
Sbjct: 483 LQQQGVQRGYINLLQECYTDCSTTFTPFHKNVT---VPVTRGVRQGDPISPNLFSACLEH 539
Query: 533 IMREV 519
+ R++
Sbjct: 540 VFRQL 544
>AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical
protein Y51F10.8 protein.
Length = 204
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = -3
Query: 228 DIEIRIRKARGAFAQLKPVWESSVMTRRIKLTLFDSIVKSVLLFGCETWRVTKTLTNRLQ 49
++ R R A AF +K + + R++ LFDS V L +G E W TK L R++
Sbjct: 19 ELHRRRRAAWAAFTNIKSTTDQ-ITCPRLRANLFDSTVLPALTYGSEAWTFTKELVERVR 77
Query: 48 V 46
V
Sbjct: 78 V 78
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 429 DQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKN-TTPLKLQDCGFEVSTEVYIS 265
++M + L+D + E+ G + T+D V S N P +DCGF T ++S
Sbjct: 528 ERMHSVLDDRSLHCEECGRGFQQHSTLDHHVASHNDPRPYICEDCGFATKTADHLS 583
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 429 DQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKN-TTPLKLQDCGFEVSTEVYIS 265
++M + L+D + E+ G + T+D V S N P +DCGF T ++S
Sbjct: 528 ERMHSVLDDRSLHCEECGRGFQQHSTLDHHVASHNDPRPYICEDCGFATKTADHLS 583
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 429 DQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKN-TTPLKLQDCGFEVSTEVYIS 265
++M + L+D + E+ G + T+D V S N P +DCGF T ++S
Sbjct: 528 ERMHSVLDDRSLHCEECGRGFQQHSTLDHHVASHNDPRPYICEDCGFATKTADHLS 583
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 235 GRRYRDTN*ESQGCFRAVETSLGVKCHDSSDQADPVRLHCQECSPFR 95
G ++++ ES+G A E S ++CH D D + C+ C ++
Sbjct: 804 GANAKNSDSESEGIDEAAEESWTMRCHCGMDHGDGDTIECEGCKTWQ 850
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 235 GRRYRDTN*ESQGCFRAVETSLGVKCHDSSDQADPVRLHCQECSPFR 95
G ++++ ES+G A E S ++CH D D + C+ C ++
Sbjct: 796 GANAKNSDSESEGIDEAAEESWTMRCHCGMDHGDGDTIECEGCKTWQ 842
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1
Query: 638 RVVHDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDI 531
RV Q L + T GV QG +LSPLLF + ++DI
Sbjct: 60 RVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDI 95
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -3
Query: 447 LMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQDCGFEVSTEVYI 268
++T DQ+ A + ISA + + D + + L L D FE + ++
Sbjct: 69 VLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVLFN 128
Query: 267 SGELLSNQGGSDE---DIEIRI-----RKARGAFAQLKPV 172
G L+S G + + D EI++ +++ G FA+L+ V
Sbjct: 129 IGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDV 168
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -3
Query: 447 LMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQDCGFEVSTEVYI 268
++T DQ+ A + ISA + + D + + L L D FE + ++
Sbjct: 69 VLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVLFN 128
Query: 267 SGELLSNQGGSDE---DIEIRI-----RKARGAFAQLKPV 172
G L+S G + + D EI++ +++ G FA+L+ V
Sbjct: 129 IGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDV 168
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -3
Query: 447 LMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQDCGFEVSTEVYI 268
++T DQ+ A + ISA + + D + + L L D FE + ++
Sbjct: 69 VLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVLFN 128
Query: 267 SGELLSNQGGSDE---DIEIRI-----RKARGAFAQLKPV 172
G L+S G + + D EI++ +++ G FA+L+ V
Sbjct: 129 IGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDV 168
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -3
Query: 447 LMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQDCGFEVSTEVYI 268
++T DQ+ A + ISA + + D + + L L D FE + ++
Sbjct: 69 VLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVLFN 128
Query: 267 SGELLSNQGGSDE---DIEIRI-----RKARGAFAQLKPV 172
G L+S G + + D EI++ +++ G FA+L+ V
Sbjct: 129 IGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDV 168
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = -3
Query: 447 LMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQDCGFEVSTEVYI 268
++T DQ+ A + ISA + + D + + L L D FE + ++
Sbjct: 69 VLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVLFN 128
Query: 267 SGELLSNQGGSDE---DIEIRI-----RKARGAFAQLKPV 172
G L+S G + + D EI++ +++ G FA+L+ V
Sbjct: 129 IGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDV 168
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -3
Query: 429 DQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQDCGFEV 286
++ +AKL + + + + + TN T+++R M +N KLQ+ GF V
Sbjct: 934 EECEAKL--IYVENQLNFIEMVTNGTIEIRSMGRNQLEEKLQEMGFRV 979
>Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical
protein F08A8.5b protein.
Length = 402
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 638 YMYYLCIRPGLYQ*FYLVYLFVLSRVHILLHCTVSKRFSQK-STNVRIIFS-LPIRHFV 808
Y+ Y C+ G++ Y++ L HIL + + S K NV + S + RHF+
Sbjct: 7 YLMYFCLVLGIFANIYVIIKITLGSSHILEYFQKNSNLSPKCEINVNNLLSFIENRHFL 65
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/31 (32%), Positives = 23/31 (74%)
Frame = -1
Query: 599 MTAGVKQGCLLSPLLFIMLLDDIMREVVTTL 507
+++GV QG + PLLFI+ +++++ ++ T+
Sbjct: 877 ISSGVPQGSVSGPLLFILFINNLLIDLAPTI 907
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = -1
Query: 719 CGPCLKQRGIPNKIIGIIQALYRGSTCRVVHDQVLGAPIEMTAGVKQGCLLSPLLFIMLL 540
C ++ +GI KI + R HD + GV QG ++SP LF L
Sbjct: 489 CNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYL 548
Query: 539 DDIMREVVTTL 507
D+ + T L
Sbjct: 549 KDMPTQQDTML 559
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein
D2085.1 protein.
Length = 2198
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -3
Query: 492 SENILEDLDYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPL 313
SE+I ++ D L+TP D + L+ ++ + N +M++++KN L
Sbjct: 1154 SEHIENAGVHSGDATLVTPAQDMNKLTLDRIKDITFRIAEAFNVTGPFNMQLIAKN-NEL 1212
Query: 312 KLQDCGFEVS 283
K+ +C VS
Sbjct: 1213 KVIECNLRVS 1222
>AF003151-17|ABJ99068.1| 99|Caenorhabditis elegans Hypothetical
protein D1007.19 protein.
Length = 99
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 387 PQIYG-GLQVLLAFDPKLASSTLCHLHSQGLPRYFRSIQCPECCHHF 524
P + G GL +LL F + ST C +S Y +QC CC H+
Sbjct: 2 PGLIGLGLLILLGFH--VTYSTQCDCNSS-CAIYTSPVQCVRCCTHY 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,380,607
Number of Sequences: 27780
Number of extensions: 456730
Number of successful extensions: 1144
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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