Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20998
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 52 2e-06
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 52 2e-06
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 52 2e-06
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 52 2e-06
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 52 2e-06
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 52 2e-06
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 50 7e-06
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 49 2e-05
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 47 6e-05
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 47 8e-05
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 489
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 490 KIVEYF 507
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 283
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRE 614
F I+VDN K +P I V+++ + +WR R+
Sbjct: 119 FSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 489
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 490 KIVEYF 507
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 283
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRE 614
F I+VDN K +P I V+++ + +WR R+
Sbjct: 119 FSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 489
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 490 KIVEYF 507
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 283
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRE 614
F I+VDN K +P I V+++ + +WR R+
Sbjct: 119 FSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 489
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 490 KIVEYF 507
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 283
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRE 614
F I+VDN K +P I V+++ + +WR R+
Sbjct: 119 FSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 489
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 490 KIVEYF 507
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 283
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRE 614
F I+VDN K +P I V+++ + +WR R+
Sbjct: 119 FSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 489
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 490 KIVEYF 507
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 283
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRE 614
F I+VDN K +P I V+++ + +WR R+
Sbjct: 119 FSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRD 155
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 50.4 bits (115), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 283
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 310 VDAIPLFHHSHYVSPMAEVALT 375
VD IPLFH + ++PM EVALT
Sbjct: 55 VDCIPLFHGTLALAPMLEVALT 76
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 48.8 bits (111), Expect = 2e-05
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 286 GRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVER 465
G + L + D +PLFH +S M EVAL Q++ V+AGYY A N N ++
Sbjct: 36 GSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQ 91
Query: 466 CPG---LKIAEKIVEYF 507
PG LKIA +I E+F
Sbjct: 92 SPGPLALKIAGRIAEFF 108
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 259
M EV I Y K+ LHAA+YPH AVNG+ L
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFL 31
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVFQSPY--VLETVSHLLQKG 677
FP AV I++DN+K+V P + V + +W P++ +V + + V LL+
Sbjct: 108 FPDAVLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDR 167
Query: 678 VERDLVDF 701
+ LVDF
Sbjct: 168 AHQHLVDF 175
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 47.2 bits (107), Expect = 6e-05
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 QSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG 474
+ L + D +PLFH +S M EVAL Q++ V+AGYY A N N ++ PG
Sbjct: 39 EGLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPG 94
Query: 475 ---LKIAEKIVEYF 507
LKIA +I E+F
Sbjct: 95 PLALKIAGRIAEFF 108
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 259
M EV I AY K+ LHAA+YPH AVNG+ L
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFL 31
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVFQSPY--VLETVSHLLQKG 677
FP AV I++DN+K+V P + V + +W P++ +V + + V LL+
Sbjct: 108 FPDAVLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDR 167
Query: 678 VERDLVDF 701
+ LVDF
Sbjct: 168 AHQHLVDF 175
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 46.8 bits (106), Expect = 8e-05
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 QSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG 474
+ L + D +PLFH +S M EVAL Q++ V+AGYY A N N ++ PG
Sbjct: 39 ECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPG 94
Query: 475 ---LKIAEKIVEYF 507
LKIA +I E+F
Sbjct: 95 PLALKIAGRIAEFF 108
Score = 44.0 bits (99), Expect = 6e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 167 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 259
M EV I AY K+ LHAA+YPH AVNG+ L
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFL 31
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 504 FPSAVFIVVDNKKMVQHLDSPAIKVHKYSDGKWRPRESLIVFQSPY--VLETVSHLLQKG 677
FP AV I++DN+K+V P + V + +W P++ +V + + V LL+
Sbjct: 108 FPDAVLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDR 167
Query: 678 VERDLVDF 701
+ LVDF
Sbjct: 168 AHQHLVDF 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,304,478
Number of Sequences: 237096
Number of extensions: 2010120
Number of successful extensions: 10772
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10772
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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