Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20996
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein.    33   0.42 
BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p pro...    33   0.42 
AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA ...    33   0.42 
AE014297-110|AAF52119.1|  975|Drosophila melanogaster CG9783-PA ...    28   9.1  

>DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein.
          Length = 1873

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 5   LWPDYDFSVDLEEELTRMNINTTAPSPVENKLKLGLDKIIEDIQNILKRKTAYLKGLILN 184
           +W     S+ + EE  +  ++   P    N   +GL+K  E I N+L R  A L    LN
Sbjct: 100 MWSSVSSSMQMAEECMKQ-VDDDVPFLNHNNALIGLEKFAETIDNVLNRIRAKLTNTTLN 158


>BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p
           protein.
          Length = 1906

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 5   LWPDYDFSVDLEEELTRMNINTTAPSPVENKLKLGLDKIIEDIQNILKRKTAYLKGLILN 184
           +W     S+ + EE  +  ++   P    N   +GL+K  E I N+L R  A L    LN
Sbjct: 119 MWSSVSSSMQMAEECMKQ-VDDDVPFLNHNNALIGLEKFAETIDNVLNRIRAKLTNTTLN 177


>AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA
           protein.
          Length = 1906

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 5   LWPDYDFSVDLEEELTRMNINTTAPSPVENKLKLGLDKIIEDIQNILKRKTAYLKGLILN 184
           +W     S+ + EE  +  ++   P    N   +GL+K  E I N+L R  A L    LN
Sbjct: 119 MWSSVSSSMQMAEECMKQ-VDDDVPFLNHNNALIGLEKFAETIDNVLNRIRAKLTNTTLN 177


>AE014297-110|AAF52119.1|  975|Drosophila melanogaster CG9783-PA
           protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 29  VDLEEELTRMNINTTAPSPVENKLKLGLDKIIEDIQNI 142
           +D+E + T   +N   PS V  KLK+GL    E+  ++
Sbjct: 366 LDIERKKTEQLLNRMLPSSVAEKLKMGLAVDPEEFSDV 403


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,829,979
Number of Sequences: 53049
Number of extensions: 430660
Number of successful extensions: 765
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)