Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20993
         (714 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g13672.2 68416.m01724 seven in absentia (SINA) family protein...    31   0.57 
At3g13672.1 68416.m01723 seven in absentia (SINA) family protein...    31   0.57 
At5g53360.1 68418.m06631 seven in absentia (SINA) family protein...    29   4.0  
At2g31800.1 68415.m03882 ankyrin protein kinase, putative simila...    29   4.0  
At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)...    28   5.3  
At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)...    28   5.3  
At2g24340.1 68415.m02909 hypothetical protein                          28   5.3  

>At3g13672.2 68416.m01724 seven in absentia (SINA) family protein
           low similarity to SP|P21461 Developmental protein seven
           in absentia {Drosophila melanogaster}; contains Pfam
           profile PF03145: Seven in absentia protein family
          Length = 220

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 510 RPFLH*NLTSNPKVF*PAYWRTSLAQCCGKFLCTYESVF 394
           R F H  +  +PK    A W  +L  CCG+  C Y   F
Sbjct: 85  RSFSHRYVHHDPKHLHHATWMLTLLDCCGRKFCLYFEAF 123


>At3g13672.1 68416.m01723 seven in absentia (SINA) family protein
           low similarity to SP|P21461 Developmental protein seven
           in absentia {Drosophila melanogaster}; contains Pfam
           profile PF03145: Seven in absentia protein family
          Length = 216

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 510 RPFLH*NLTSNPKVF*PAYWRTSLAQCCGKFLCTYESVF 394
           R F H  +  +PK    A W  +L  CCG+  C Y   F
Sbjct: 81  RSFSHRYVHHDPKHLHHATWMLTLLDCCGRKFCLYFEAF 119


>At5g53360.1 68418.m06631 seven in absentia (SINA) family protein
           low similarity to siah-1A protein [Mus musculus]
           GI:297035; contains Pfam profile PF03145: Seven in
           absentia protein family
          Length = 233

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 504 FLH*NLTSNPKVF*PAYWRTSLAQCCGKFLCTYESVF 394
           F H  + SNP+    A W  ++ QC G++ C +   F
Sbjct: 92  FNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAF 128


>At2g31800.1 68415.m03882 ankyrin protein kinase, putative similar
           to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674; contains Pfam profile PF00023:
           Ankyrin repeat; identical to cDNA calcineurin B-like
           protein 10 (CBL10) GI:29150247; blastp match of 67%
           identity and 1.9e-200 P-value to
           GP|18700701|gb|AAL78674.1|AF458699_1|AF458699
           ankyrin-kinase {Medicago truncatula}
          Length = 476

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 225 TALDEALNDKDSYRDSSSVHLARHPATLSENV 320
           T +   + DKD Y+DS +++  +H  TL E V
Sbjct: 214 TKVSVKILDKDLYKDSDTINAFKHELTLFEKV 245


>At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)
           similar to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
           Protein kinase domain; contains Pfam profile PF00023:
           Ankyrin repeat
          Length = 479

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 225 TALDEALNDKDSYRDSSSVHLARHPATLSENV 320
           T +   + DKDSY D   ++  RH  TL E V
Sbjct: 217 TRVSVKILDKDSYSDPERINAFRHELTLLEKV 248


>At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)
           similar to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
           Protein kinase domain; contains Pfam profile PF00023:
           Ankyrin repeat
          Length = 479

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 225 TALDEALNDKDSYRDSSSVHLARHPATLSENV 320
           T +   + DKDSY D   ++  RH  TL E V
Sbjct: 217 TRVSVKILDKDSYSDPERINAFRHELTLLEKV 248


>At2g24340.1 68415.m02909 hypothetical protein
          Length = 322

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -1

Query: 681 LTNKKINTFKLVPNLNHFISTFTNLGG 601
           L NK  N F    NLN+ + TFTNLGG
Sbjct: 154 LDNK--NAFNNDENLNNLMITFTNLGG 178


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,130,907
Number of Sequences: 28952
Number of extensions: 274246
Number of successful extensions: 649
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)