Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20990
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 180 1e-45
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 165 2e-41
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF077542-12|AAC26293.1| 169|Caenorhabditis elegans Hypothetical... 31 0.90
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 28 6.4
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 28 6.4
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 28 6.4
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 28 6.4
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 6.4
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 180 bits (438), Expect = 1e-45
Identities = 94/171 (54%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
Frame = +1
Query: 256 HRDATDDQVTIDSAHAILKHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTV 435
+RD T+DQVTID+AHAIL+H+VGIKCATITPDE R++EF LKKMWLSPNGTIRNILGGTV
Sbjct: 71 YRDETNDQVTIDAAHAILEHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTV 130
Query: 436 FREPILCQSIPRVVPGWTKPIVIGLMRTATNTRRKILLYRNPERLNLFTLHEMVRQRGVY 615
FREPILC++IPR+VPGWT+PI IG + L+ + L L +++ + V+
Sbjct: 131 FREPILCKNIPRLVPGWTQPITIGRHAFGDQYKCTDLVIPSGSTLQLL-VNKPDGSKDVH 189
Query: 616 --YMILKLRALLWACTIPTNRFGPLPIPVFQVALQKKWPLYLSTKNTILKR 762
Y K + A FQ AL K+WPLYLSTKNTILK+
Sbjct: 190 NVYDFKKSGGVGLAMYNTDESIKGFAHSCFQYALMKQWPLYLSTKNTILKK 240
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +3
Query: 510 HAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDF-KTPGVAMGMYNTDESIRSFA 686
HA GDQYK D V+P ++L+ DG+ + +YDF K+ GV + MYNTDESI+ FA
Sbjct: 156 HAFGDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMYNTDESIKGFA 215
Query: 687 HSSF 698
HS F
Sbjct: 216 HSCF 219
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Frame = +2
Query: 95 LTRNYGTA-----KRVVAAKPVVEMDGDEMTRIMWAKIKERLIFPYVKVDCLYFDLGL 253
L RN TA +++ PVV++DGDEMTRI+W +IK +LI PY+ +D Y+DLGL
Sbjct: 12 LARNVATAATQERQKIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGL 69
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 165 bits (402), Expect = 2e-41
Identities = 87/170 (51%), Positives = 111/170 (65%), Gaps = 1/170 (0%)
Frame = +1
Query: 256 HRDATDDQVTIDSAHAILKHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTV 435
HRDATDDQVTID+A+A LK+NV +KCATITPDE RVEEFKLKKMW SPNGTIRNILGGTV
Sbjct: 49 HRDATDDQVTIDAANATLKYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTV 108
Query: 436 FREPILCQSIPRVVPGWTKPIVIGLMRTATNTRRKILLYRNPERLNL-FTLHEMVRQRGV 612
FREPI+ +++PR+V W+KPI+IG A + + +L + F + +
Sbjct: 109 FREPIIVKNVPRLVNTWSKPIIIGRHAHADQYKATDFVVPGAGKLEIKFVSADGTQTIQE 168
Query: 613 YYMILKLRALLWACTIPTNRFGPLPIPVFQVALQKKWPLYLSTKNTILKR 762
K + + + F+ ALQ+K+PLYLSTKNTILK+
Sbjct: 169 TVFDFKGPGVSLSMYNTDDSIRDFAHASFKYALQRKFPLYLSTKNTILKK 218
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 HAHGDQYKAQDFVVPKPGKVELVYTTRDGT-TERRVLYDFKTPGVAMGMYNTDESIRSFA 686
HAH DQYKA DFVVP GK+E+ + + DGT T + ++DFK PGV++ MYNTD+SIR FA
Sbjct: 134 HAHADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYNTDDSIRDFA 193
Query: 687 HSSFSGSFTEK 719
H+SF + K
Sbjct: 194 HASFKYALQRK 204
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 116 AKRVVAAKPVVEMDGDEMTRIMWAKIKERLIFPYVKVDCLYFDLGL 253
A + + +VEM GDEMTRI+W IKE+LI PYV ++ +FDLG+
Sbjct: 2 AAQKIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGI 47
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 5 HEQW*IHEQYRNMANTSTTKILKCVNQFASLTRNYGTA-KRVVAAKPVVEM-DGDEMTRI 178
++QW I N NT+ + KC++ F +NYG KR+V ++E+ D +T
Sbjct: 730 YQQWTIDTVQMNYQNTNLKYLPKCISIF---QKNYGDLNKRMVNFARIMEVGDNITITGH 786
Query: 179 MWAKIKERLIFPYVKVDCLY 238
+W E YV +D Y
Sbjct: 787 IWQNASESTFNLYVGMDPKY 806
>AF077542-12|AAC26293.1| 169|Caenorhabditis elegans Hypothetical
protein Y57G7A.9 protein.
Length = 169
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 271 DDQVTIDSAHAILKHNVGIKCATITPDEQRVE 366
+DQ + H I K N GI+CA + P+ Q E
Sbjct: 29 NDQYFQEVIHRICKRNEGIRCAMLAPNAQHAE 60
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 483 LDETYCDRPHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNT 662
LD RPH H D Y D PK K G+T +P V+ G +
Sbjct: 167 LDYNQASRPHRHMDYYGPSDLCPPKVPKSASSNCVFPGSTHDE--SSPSSPSVSEGSAAS 224
Query: 663 D-ESIRSFAHSSFSGSFTEKMAS 728
+ E+ S A SS + S M S
Sbjct: 225 EPETSSSAASSSSTASAPPSMPS 247
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 483 LDETYCDRPHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNT 662
LD RPH H D Y D PK K G+T +P V+ G +
Sbjct: 271 LDYNQASRPHRHMDYYGPSDLCPPKVPKSASSNCVFPGSTHDE--SSPSSPSVSEGSAAS 328
Query: 663 D-ESIRSFAHSSFSGSFTEKMAS 728
+ E+ S A SS + S M S
Sbjct: 329 EPETSSSAASSSSTASAPPSMPS 351
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 483 LDETYCDRPHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNT 662
LD RPH H D Y D PK K G+T +P V+ G +
Sbjct: 322 LDYNQASRPHRHMDYYGPSDLCPPKVPKSASSNCVFPGSTHDE--SSPSSPSVSEGSAAS 379
Query: 663 D-ESIRSFAHSSFSGSFTEKMAS 728
+ E+ S A SS + S M S
Sbjct: 380 EPETSSSAASSSSTASAPPSMPS 402
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 483 LDETYCDRPHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNT 662
LD RPH H D Y D PK K G+T +P V+ G +
Sbjct: 322 LDYNQASRPHRHMDYYGPSDLCPPKVPKSASSNCVFPGSTHDE--SSPSSPSVSEGSAAS 379
Query: 663 D-ESIRSFAHSSFSGSFTEKMAS 728
+ E+ S A SS + S M S
Sbjct: 380 EPETSSSAASSSSTASAPPSMPS 402
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 483 LDETYCDRPHAHGDQYKAQDFVVPKPGKVELVYTTRDGTTERRVLYDFKTPGVAMGMYNT 662
LDE + + DQY+ ++ + V G + V D+KT G+++ NT
Sbjct: 638 LDEKHAEPEPNPADQYERLTHIIIDCSTIIYVDLMGQGAL-KDVYNDYKTIGISVLFANT 696
Query: 663 DESIR-SFAHSSF 698
+E +R +F S F
Sbjct: 697 NEHVRQNFETSQF 709
>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical protein
F45H11.4 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 436 FREPILCQSIPRVVPGWTKPIVIGL 510
+ EP+ Q+ P +VP T P+ + L
Sbjct: 1191 YYEPVFYQAYPSIVPSTTSPVTVSL 1215
>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical protein
F45H11.4 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 436 FREPILCQSIPRVVPGWTKPIVIGL 510
+ EP+ Q+ P +VP T P+ + L
Sbjct: 1191 YYEPVFYQAYPSIVPSTTSPVTVSL 1215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,704,735
Number of Sequences: 27780
Number of extensions: 407910
Number of successful extensions: 959
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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