Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20988
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17249 Cluster: Urbain; n=1; Bombyx mori|Rep: Urbain - ... 177 2e-43
UniRef50_Q2SE75 Cluster: Putative uncharacterized protein; n=1; ... 37 0.53
UniRef50_UPI0000498F93 Cluster: conserved hypothetical protein; ... 36 0.70
UniRef50_Q4BYW3 Cluster: TPR repeat:TPR repeat precursor; n=2; C... 36 0.70
UniRef50_Q0TQS3 Cluster: Putative phage structural protein; n=1;... 36 0.93
UniRef50_UPI0000E47620 Cluster: PREDICTED: hypothetical protein,... 36 1.2
UniRef50_O49343 Cluster: Putative uncharacterized protein At2g30... 36 1.2
UniRef50_A2DHN4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_UPI00006CE50E Cluster: hypothetical protein TTHERM_0014... 35 1.6
UniRef50_Q8IAK9 Cluster: Putative uncharacterized protein PF08_0... 35 1.6
UniRef50_Q24BX8 Cluster: SMC family, C-terminal domain containin... 35 1.6
UniRef50_Q70C92 Cluster: Cytosine-specific methyltransferase; n=... 35 2.1
UniRef50_A5I1U0 Cluster: Cell division protein precursor; n=4; C... 35 2.1
UniRef50_Q0F3L7 Cluster: Ubiquinol-cytochrome c reductase, iron-... 34 2.8
UniRef50_A6C413 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_O49529 Cluster: Predicted protein; n=10; core eudicotyl... 34 2.8
UniRef50_A7QBX3 Cluster: Chromosome chr1 scaffold_75, whole geno... 34 2.8
UniRef50_Q5BH67 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_P45975 Cluster: Histone-lysine N-methyltransferase Su(v... 34 2.8
UniRef50_UPI0000E4A189 Cluster: PREDICTED: similar to dystonin; ... 34 3.7
UniRef50_Q6R1M2 Cluster: Merozoite surface protein 6; n=9; Plasm... 34 3.7
UniRef50_Q6NJV8 Cluster: Putative glycerol-3-phosphate transport... 33 4.9
UniRef50_Q60P21 Cluster: Putative uncharacterized protein CBG224... 33 4.9
UniRef50_Q8BCV5 Cluster: Nucleocapsid; n=24; ssRNA negative-stra... 33 6.5
UniRef50_Q9PQ08 Cluster: Unique hypothetical; n=2; cellular orga... 33 6.5
UniRef50_Q476C1 Cluster: Helix-turn-helix, AraC type; n=1; Ralst... 33 6.5
UniRef50_Q2SJH0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q7P6P9 Cluster: Putative uncharacterized protein FNV158... 33 6.5
UniRef50_A2FAZ9 Cluster: UvrB/uvrC motif family protein; n=2; Eu... 33 6.5
UniRef50_Q9LQ20 Cluster: F16P17.1 protein; n=10; Brassicaceae|Re... 33 8.6
UniRef50_Q857J1 Cluster: Gp31; n=1; Mycobacterium phage Bxz2|Rep... 33 8.6
UniRef50_Q7QJG3 Cluster: ENSANGP00000019133; n=4; Eumetazoa|Rep:... 33 8.6
UniRef50_A2E3F5 Cluster: ARF GAP-like zinc finger-containing pro... 33 8.6
>UniRef50_Q17249 Cluster: Urbain; n=1; Bombyx mori|Rep: Urbain -
Bombyx mori (Silk moth)
Length = 551
Score = 177 bits (432), Expect = 2e-43
Identities = 82/86 (95%), Positives = 84/86 (97%)
Frame = +2
Query: 254 KNVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIYTAGIALR 433
+NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDI TA IALR
Sbjct: 93 ENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALR 152
Query: 434 QGFQEVSDGIGKWYARTEQINELQAA 511
QGFQEVSDGIGKWYARTEQINELQA+
Sbjct: 153 QGFQEVSDGIGKWYARTEQINELQAS 178
Score = 138 bits (333), Expect = 2e-31
Identities = 69/80 (86%), Positives = 75/80 (93%)
Frame = +3
Query: 27 YIRARRTRSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIP 206
++ A R +SIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIP
Sbjct: 18 FVLAARA-ASIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIP 76
Query: 207 VKVIVEEIKPSLKSDLKTLK 266
VKVIVEEIKPSLKSDL+ ++
Sbjct: 77 VKVIVEEIKPSLKSDLENVE 96
Score = 119 bits (287), Expect = 6e-26
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +1
Query: 511 LQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETPNKASFETIESGLKSLETNFNS 684
LQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEET NKASFETIESGLKSLETNFNS
Sbjct: 179 LQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSLETNFNS 236
>UniRef50_Q2SE75 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 570
Score = 36.7 bits (81), Expect = 0.53
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +3
Query: 33 RARRTRSSIPDKVPEAEDKPL-NVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPV 209
++RR S+ + P + +P+ +V++ L S + + Q D +L + EVI V
Sbjct: 229 KSRRNWRSLIAEYPHQQIEPMESVLEWLRSYLKPVLQLEN----DETL-LTQSEVITYRV 283
Query: 210 KVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKML 377
K++ E+ +++ L+TL+ + K+ + SI +PG R+ + KH N +ML
Sbjct: 284 KLLKEDGSEAVRKKLRTLQQKRKLLPFKAYTSIPHLPGSRTGLADKHIDANKAEML 339
>UniRef50_UPI0000498F93 Cluster: conserved hypothetical protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 2909
Score = 36.3 bits (80), Expect = 0.70
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +3
Query: 81 EDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLKT 260
ED+ +N +++ + E I + ++I++ N + K I+I +KVIVEE L D
Sbjct: 867 EDE-INTKNDIIKKSESIKEKSSIQNPRNKILNELKRKIEIELKVIVEECGLCLIEDSNV 925
Query: 261 LKCRMKMR 284
+ C MK++
Sbjct: 926 VVCNMKVQ 933
>UniRef50_Q4BYW3 Cluster: TPR repeat:TPR repeat precursor; n=2;
Chroococcales|Rep: TPR repeat:TPR repeat precursor -
Crocosphaera watsonii
Length = 456
Score = 36.3 bits (80), Expect = 0.70
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 511 LQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEET--PNKASFETIESGLKSLETNFN 681
L H QE+F AQIQK+NE ++ + I PSVEET + E+I+ ++++E N
Sbjct: 385 LNHNQEHFLAQIQKVNEGMNPVIEEQPI--PSVEETLPASPNDIESIKDEIETIENPIN 441
>UniRef50_Q0TQS3 Cluster: Putative phage structural protein; n=1;
Clostridium perfringens ATCC 13124|Rep: Putative phage
structural protein - Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A)
Length = 1019
Score = 35.9 bits (79), Expect = 0.93
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +1
Query: 454 RRYWKMVRSYRAN*RAPGRLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETPNKAS 633
R+Y++ V+ + PG + Q +G + K NE +F K + P EET +K
Sbjct: 698 RKYFRYVKGIEGLQQYPGNIGDGQITYGYGVTKANEPTYFAKLGN---PPCSEETASKVL 754
Query: 634 FETIESGLKSLETN 675
FE I SL N
Sbjct: 755 FELIPDRYGSLVKN 768
>UniRef50_UPI0000E47620 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 2162
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 269 PDENEEIKRPLVDLRNPGPPQ-HQEHETQNPEHHEDAEKIVSSVKNDIYTAGIALRQGFQ 445
P +N ++ D+R GPP+ E T+ P +D EK + + + T + ++Q +
Sbjct: 1166 PGKNGDLGVTQFDIRGTGPPKVESELGTKGPGEEDDTEKTENVQEEEPPTRKVEMKQTAE 1225
Query: 446 EVSDG 460
EVS G
Sbjct: 1226 EVSSG 1230
>UniRef50_O49343 Cluster: Putative uncharacterized protein
At2g30780; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g30780 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 452
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 347 TQNPEHHEDAEKIVSSVKNDIYTAGIALRQGFQEVSDGIGKWYART 484
T P HH D + VS +K+++ T G + ++ FQ V D G+W RT
Sbjct: 20 TSLPAHHTDLVQRVSILKDELLTIGNS-KEKFQNVLDQKGQWLFRT 64
>UniRef50_A2DHN4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 564
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 63 DKVPEAEDKPLNVV-DNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPS 239
+K + +K + + D L QEL D+ I D+ N ++ + E+ P K ++E +
Sbjct: 377 EKTLDDHEKRIKALEDKLKEMQELADKLGLIDDLSNEVKRLQGEIEQRPTKDLIERLFEK 436
Query: 240 LKSDLKTLKCRMKMRKS 290
K + + +K +KS
Sbjct: 437 FKQSMGQIADMIKQQKS 453
>UniRef50_UPI00006CE50E Cluster: hypothetical protein
TTHERM_00141020; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00141020 - Tetrahymena
thermophila SB210
Length = 1390
Score = 35.1 bits (77), Expect = 1.6
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 NYIRARRTRSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDI 203
NY ++ ++SSI ++E P++ V+NL + E D N K ID +K++ I+I
Sbjct: 83 NYPQSFSSQSSISSDF-KSESNPISKVENLIQKNEKPDSNNEQKKIDLEQSNDKRKFIEI 141
Query: 204 PVKVIVEE-IKPSLKSD 251
+ +EE I +KSD
Sbjct: 142 CDQENIEEIIYKKVKSD 158
>UniRef50_Q8IAK9 Cluster: Putative uncharacterized protein
PF08_0137; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF08_0137 - Plasmodium
falciparum (isolate 3D7)
Length = 1219
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 24 NYIRARRTRSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDI---DNSLRANKKEV 194
NY + D P D P+ + DN +SEQE D+ + D+ +N+ K E
Sbjct: 276 NYASEQNVADQSTDNYPTQHDVPVQLRDNYASEQEYFDRGEQLNDVSADNNTSNKLKDEP 335
Query: 195 ID 200
+D
Sbjct: 336 VD 337
>UniRef50_Q24BX8 Cluster: SMC family, C-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: SMC
family, C-terminal domain containing protein -
Tetrahymena thermophila SB210
Length = 1296
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 51 SSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEI 230
+SI +K+ + E+K + + ++ E+I+ NT+K+I+ L+ + +E ID + +
Sbjct: 725 TSIQEKIKKLEEKKQQIKNVIAKSLEIINLENTVKEIEKRLQ-DTQEKIDKKRSEVYDPF 783
Query: 231 KPSLKSDLKTL 263
K D+K L
Sbjct: 784 CKKYKIDIKEL 794
>UniRef50_Q70C92 Cluster: Cytosine-specific methyltransferase; n=2;
Streptococcus|Rep: Cytosine-specific methyltransferase -
Streptococcus thermophilus
Length = 365
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 96 NVVDNLSSEQELIDQANTIKDIDNSLRANKKEVI 197
N+ D+++ + +L D+ + IKDI+N+L NK +VI
Sbjct: 44 NLKDSVALKADLFDEESAIKDIENNLNGNKIDVI 77
>UniRef50_A5I1U0 Cluster: Cell division protein precursor; n=4;
Clostridium botulinum|Rep: Cell division protein
precursor - Clostridium botulinum A str. ATCC 3502
Length = 256
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 66 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVID-IPVKVIVEEIKPSL 242
K+P + + + N++ +E+I ++TIK +N NKK+ I+ I + +EE+K +
Sbjct: 41 KIPYFNIESIEIKGNVNIPKEVIKDSSTIKTGNNIFYTNKKDAIENISLNPYIEEVKITK 100
Query: 243 KSDLKTLKCRMKMRKS 290
K K L+ +K R++
Sbjct: 101 KLPNK-LQIYVKEREA 115
>UniRef50_Q0F3L7 Cluster: Ubiquinol-cytochrome c reductase,
iron-sulfur subunit; n=1; Mariprofundus ferrooxydans
PV-1|Rep: Ubiquinol-cytochrome c reductase, iron-sulfur
subunit - Mariprofundus ferrooxydans PV-1
Length = 200
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -2
Query: 544 SERRNFLGNVASGLELVNLLGTSVPF 467
S RRNFL VASGL V + G +VPF
Sbjct: 8 SRRRNFLWGVASGLGAVGVAGVAVPF 33
>UniRef50_A6C413 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 1277
Score = 34.3 bits (75), Expect = 2.8
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 30 IRARRTRSSIPDKVPEA-EDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIP 206
I T++SI + + E+ ++++N+S ++ + +KDI N LR K+ ++I
Sbjct: 623 INLEGTKTSIQSLITSSSEEHTESLLNNISVGKKTAREIKPLKDILNILRCAYKKRVEIS 682
Query: 207 VKVIVEEIKPSLKSDLKTLK 266
K ++ LKS L TLK
Sbjct: 683 EKENALKLLEELKSPLDTLK 702
>UniRef50_O49529 Cluster: Predicted protein; n=10; core
eudicotyledons|Rep: Predicted protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1026
Score = 34.3 bits (75), Expect = 2.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 308 LRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIYTAGIALRQGFQEVSDGI 463
L P + Q P+H E+ E +++ +KND G R G ++S +
Sbjct: 624 LSQPSSSPDLQERNQTPDHPEEDEDLIAGIKNDFAEIGGRFRTGISKLSGNL 675
>UniRef50_A7QBX3 Cluster: Chromosome chr1 scaffold_75, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_75, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 353
Score = 34.3 bits (75), Expect = 2.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 460 YWKMVRSYRAN*RAPGRLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETPNKASF- 636
YWKM + R + P + E F Q LNE +H P TIA PS P+ A
Sbjct: 136 YWKMEKHERKDRNLPSNMS--SEVF----QALNEVVHRRYPLRTIAQPSSSSVPSPAPIS 189
Query: 637 ETIESGLKSLET 672
+ I S L+ L+T
Sbjct: 190 KMIWSNLQCLKT 201
>UniRef50_Q5BH67 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1511
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 251 FKNVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 394
F+ +VP + ++ P ++ P PP +H+TQ+P+ H DAE+ V +
Sbjct: 157 FQERKVPWVDVDVVLPAGTIQPPEPP---DHDTQDPDEHADAEESVDA 201
>UniRef50_P45975 Cluster: Histone-lysine N-methyltransferase
Su(var)3-9; n=5; Neoptera|Rep: Histone-lysine
N-methyltransferase Su(var)3-9 - Drosophila melanogaster
(Fruit fly)
Length = 635
Score = 34.3 bits (75), Expect = 2.8
Identities = 25/68 (36%), Positives = 31/68 (45%)
Frame = -1
Query: 527 SWKCCKRPGAR*FARYERTIFQYRLTLPGSLDEERFPLCKCHF*RKKRFFQHLRGVQDSV 348
S KCC R FA YER+ + RL PGS E C C R QH R V +
Sbjct: 424 STKCCARFAGELFA-YERSTRRLRLR-PGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVL 481
Query: 347 FRALDAAG 324
F+ + +G
Sbjct: 482 FKTANGSG 489
>UniRef50_UPI0000E4A189 Cluster: PREDICTED: similar to dystonin; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
dystonin - Strongylocentrotus purpuratus
Length = 3054
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +3
Query: 123 QELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRG 296
+E+ + TIKD+ + +++ + ++IP ++I ++K D+ +K ++M K G
Sbjct: 1665 EEMNGTSGTIKDLQDQIKSQEPPAVEIPAIKDQQDILQAIKEDIDAVKQDVEMTKQLG 1722
>UniRef50_Q6R1M2 Cluster: Merozoite surface protein 6; n=9;
Plasmodium falciparum|Rep: Merozoite surface protein 6 -
Plasmodium falciparum
Length = 429
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +2
Query: 266 VPDENEEIKR-PLVDLRNPGPPQHQEHETQNPEHHED-AEKIVSSVKNDI 409
+PDENE++K P D ++ + +E ET+N E +D E+I + ++DI
Sbjct: 275 IPDENEQVKEDPQEDNKDEDEDEDEETETENLETEDDNNEEIEENEEDDI 324
>UniRef50_Q6NJV8 Cluster: Putative glycerol-3-phosphate transporter;
n=2; Actinomycetales|Rep: Putative glycerol-3-phosphate
transporter - Corynebacterium diphtheriae
Length = 456
Score = 33.5 bits (73), Expect = 4.9
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = -2
Query: 598 PRWCQLV**NVAFHSTFVSERRNFLGNVASGLELVNLLGTSVPFSNTV*HFLEALTKSDS 419
P W ++ VAF F+ +G A L N+ GT+ F+ + L A S
Sbjct: 349 PFWLMVI--FVAFIGGFIYGPVGLIGLQALDLSPRNVAGTAAGFTGLFGYLLGATLASTG 406
Query: 418 RCVNVIFDGRNDFFSIFVVFRILCFVLLML 329
V F G N F +F+VF +L V+ +
Sbjct: 407 VGFLVKFAGWNVTFIVFLVFTVLILVIFQV 436
>UniRef50_Q60P21 Cluster: Putative uncharacterized protein CBG22448;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG22448 - Caenorhabditis
briggsae
Length = 344
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 257 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKI 385
NV + ++EEI +V RN GP + H ++P H + E++
Sbjct: 246 NVYMTRKSEEISTNVVFARNDGPIRKHHHHNKSPVRHRELERL 288
>UniRef50_Q8BCV5 Cluster: Nucleocapsid; n=24; ssRNA negative-strand
viruses|Rep: Nucleocapsid - Mirafiore lettuce virus
Length = 437
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 339 STKHRILNTTKMLKKSFLPSKMTFTQRESLFVKASRKCQTVLENGTLVPSKLTSSRPLAT 518
S +H + K+L F+ SK+ E+ +A + ++ N +PSK + RPL+
Sbjct: 173 SAEHNFIFDVKVLSPDFIDSKLLVNNIET-GNRAIKAAFCLVYNQGGLPSKTSEERPLSK 231
Query: 519 FPRK--FRRSDTK 551
F R+ FR D K
Sbjct: 232 FVRETIFREKDLK 244
>UniRef50_Q9PQ08 Cluster: Unique hypothetical; n=2; cellular
organisms|Rep: Unique hypothetical - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 4688
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 102 VDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLKTLK 266
VD++ + D+ N + ++NS AN + +V+VE K LK DL +LK
Sbjct: 1420 VDDIDNVLNTADKPNIVYQLENSNDANNNLKLATNAQVVVENNKKFLKFDLVSLK 1474
>UniRef50_Q476C1 Cluster: Helix-turn-helix, AraC type; n=1;
Ralstonia eutropha JMP134|Rep: Helix-turn-helix, AraC
type - Ralstonia eutropha (strain JMP134) (Alcaligenes
eutrophus)
Length = 344
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -2
Query: 238 DGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSC-SLDKL 107
DGL++ + LTG + F + RRL S +L ++M SC +LD+L
Sbjct: 55 DGLLAEALRLTGRTDIGFEWGRRLKLNSHDILGYAMLSCPTLDQL 99
>UniRef50_Q2SJH0 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 469
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = -2
Query: 286 FLIFIRHFNVFKSL-FNDG---LISSTITLTGMSMTSFLFARRLLSMSLMVLA 140
F +I F ++K +DG L+ S + LT ++MT L +RR++SM++ VLA
Sbjct: 163 FFSYICIFLIYKKKPASDGAFLLVVSAVLLTSLAMTVALASRRIISMTIFVLA 215
>UniRef50_Q7P6P9 Cluster: Putative uncharacterized protein FNV1581;
n=2; Fusobacterium nucleatum|Rep: Putative
uncharacterized protein FNV1581 - Fusobacterium
nucleatum subsp. vincentii ATCC 49256
Length = 396
Score = 33.1 bits (72), Expect = 6.5
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 132 IDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLK-TLKCRMKMRKSRGL*SI 308
I+ A+TI + + KE + +K IVEEI L+SD+K ++ + R+ + S
Sbjct: 118 INLASTIMLLKEQIPQKSKESVRAFIKKIVEEINKLLESDIKRAVRAALNKRQHSPIPSA 177
Query: 309 *EIPGPRSIKSTKHR-ILNTTKMLKKSFLPSKMTFTQRES 425
+ K+T R I N K LKK +P F +R S
Sbjct: 178 SSL----DFKTTIQRGIKNYNKELKK-IIPEHYYFFERAS 212
>UniRef50_A2FAZ9 Cluster: UvrB/uvrC motif family protein; n=2;
Eukaryota|Rep: UvrB/uvrC motif family protein -
Trichomonas vaginalis G3
Length = 745
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +3
Query: 3 TTRGPVANYIRARRTRSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRAN 182
TT P N++ T +S K+PE + V LS + EL + NT DI+ A+
Sbjct: 293 TTEAP--NHLMEHATSAS--SKLPELTSRASAVETELSEKNELQTRDNTTIDIERRKNAS 348
Query: 183 KKEVIDIPVKVIVEEI 230
K + ++ P+ + + I
Sbjct: 349 KIQELETPINMHAKAI 364
>UniRef50_Q9LQ20 Cluster: F16P17.1 protein; n=10; Brassicaceae|Rep:
F16P17.1 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 514
Score = 32.7 bits (71), Expect = 8.6
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -2
Query: 277 FIRHFNVFKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLD--KLS 104
F+R +++ + G+I ST+T M + F RL MV + CS D S
Sbjct: 352 FLRAEDIYLEMLCKGIIPSTVTYNSM-VDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFS 410
Query: 103 TTFKGLSSASGTLSGMEL 50
T KG A G+EL
Sbjct: 411 TLIKGYCKAGRVDDGLEL 428
>UniRef50_Q857J1 Cluster: Gp31; n=1; Mycobacterium phage Bxz2|Rep:
Gp31 - Mycobacteriophage Bxz2
Length = 100
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 335 QEHETQNPEHHEDAEKIVSSVKNDIYTAGIALRQGFQEVSDGIG--KWYARTEQINELQ 505
+ H+ H+E S++++DI A+R+GF+E+ IG + RTE+I ++
Sbjct: 32 RSHQKVKQTHYEITNDHDSNIRHDIDDLAEAVREGFREIRKDIGGLREELRTERIERIE 90
>UniRef50_Q7QJG3 Cluster: ENSANGP00000019133; n=4; Eumetazoa|Rep:
ENSANGP00000019133 - Anopheles gambiae str. PEST
Length = 412
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 15 PVANYIRARRTRSSIPDKVPEAEDKP-LNVVDNLSSEQELIDQANTIKDIDNSLRANKKE 191
PV R RR+R +PD+ + ED+P + N S ++E I + ++ DN + N KE
Sbjct: 133 PVIGGRRGRRSRHLLPDESSDEEDEPTTHSRSNASDKEENIGKVVCVETSDNK-KKNPKE 191
>UniRef50_A2E3F5 Cluster: ARF GAP-like zinc finger-containing
protein; n=1; Trichomonas vaginalis G3|Rep: ARF GAP-like
zinc finger-containing protein - Trichomonas vaginalis
G3
Length = 829
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 227 NQTVVEE*FKNVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVK 400
NQ E F + PD+N + K P + P QH E + +P+ AEK+ S VK
Sbjct: 185 NQNASEA-FVCMPFPDQNSKSKPPPQQFQQPQDRQH-EKKKNDPDQPSKAEKLFSDVK 240
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,664,363
Number of Sequences: 1657284
Number of extensions: 12150187
Number of successful extensions: 48705
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 46046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48632
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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