BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20988 (686 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 30 0.36 SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 29 0.48 SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 27 1.9 SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 27 1.9 SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 27 1.9 SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 27 2.5 SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 27 3.4 SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 4.4 SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|... 26 4.4 SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 26 5.9 SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 5.9 SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 7.8 >SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosaccharomyces pombe|chr 1|||Manual Length = 1318 Score = 29.9 bits (64), Expect = 0.36 Identities = 22/105 (20%), Positives = 53/105 (50%) Frame = +3 Query: 66 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLK 245 K P +E P V L+ + I +I +++ + ++ +V++ P + ++ +I+ + Sbjct: 377 KAPTSEAPPKGHVKQLAKQLGNIYMPQSINNVEPTSHSSISKVVN-PSEKVISKIERACL 435 Query: 246 SDLKTLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLK 380 + + +KM K+ L P PR++ +T+H+I + ++ K Sbjct: 436 AGNGNVHPSIKMEKNLEL-----NPHPRTLNATEHKINSRIQVSK 475 >SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosaccharomyces pombe|chr 2|||Manual Length = 1630 Score = 29.5 bits (63), Expect = 0.48 Identities = 15/61 (24%), Positives = 32/61 (52%) Frame = +2 Query: 467 KWYARTEQINELQAACNISKKISALRYKS*MKRYILLNQLTPSRPLLSRKRQIKLLLKQS 646 +W + TEQ+ ELQ +C S + + S + +L S ++ +Q++ LL+++ Sbjct: 586 RWKSLTEQVVELQPSCKSSSQRHLIIRNSWARNLLLRLTGCSSEAIVENFKQLRCLLQEN 645 Query: 647 N 649 + Sbjct: 646 S 646 >SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 754 Score = 27.5 bits (58), Expect = 1.9 Identities = 26/107 (24%), Positives = 44/107 (41%) Frame = +3 Query: 66 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLK 245 ++ E E V+D E+EL +K +N ++ E+ P + + K Sbjct: 646 EIEELEPVVQKVLDEEKQERELKIAERDLKKGENIMKYGD-EIRSRPARTWFQSEKDKQA 704 Query: 246 SDLKTLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLKKS 386 S K + + K + E+P R+ K TK+ L+ K KKS Sbjct: 705 SKASEAKDKKSLAKRKKQMEKEEVP--RAYKKTKNDRLSNKKSTKKS 749 >SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces pombe|chr 1|||Manual Length = 4924 Score = 27.5 bits (58), Expect = 1.9 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%) Frame = -3 Query: 552 LLYLSAEIFLEMLQAAWSSLICSVRAY---HFPIPSDTS 445 L L AEI LE LQ +W L C A HF I D+S Sbjct: 3894 LFSLDAEISLEKLQNSWKRL-CQKNAILRTHFAISEDSS 3931 >SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe|chr 1|||Manual Length = 727 Score = 27.5 bits (58), Expect = 1.9 Identities = 15/56 (26%), Positives = 24/56 (42%) Frame = +2 Query: 323 PPQHQEHETQNPEHHEDAEKIVSSVKNDIYTAGIALRQGFQEVSDGIGKWYARTEQ 490 PP H ++ TQ HEDA+ S + ++ I R ++ G + EQ Sbjct: 609 PPLHLKNTTQTNNAHEDAQSSNLSQNHSLFYERIPQRPSYRIEKQNKGIYEDENEQ 664 >SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 708 Score = 27.1 bits (57), Expect = 2.5 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 7/81 (8%) Frame = +2 Query: 293 RPLVDLRNPGPPQHQEHE--TQNPEHHEDAEKIVSSVKNDIYTAG-----IALRQGFQEV 451 RPL++LR P P E + +N ++ + I+ S N+ +TA ++ GF++ Sbjct: 597 RPLINLRQPKPLLRSEADCIIKNLQNFSTDDLIIKS--NEKFTAAKNSLINVIKSGFEQ- 653 Query: 452 SDGIGKWYARTEQINELQAAC 514 ++ I ++ +T + L C Sbjct: 654 NEFINPYFLQTNYLKNLLCCC 674 >SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosaccharomyces pombe|chr 2|||Manual Length = 515 Score = 26.6 bits (56), Expect = 3.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 284 EIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE 379 E +P D RN GP Q + + + PE H +++ Sbjct: 148 EEPKPSGDFRNEGPKQCDDSKIEKPELHVNSK 179 >SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Phf2|Schizosaccharomyces pombe|chr 1|||Manual Length = 538 Score = 26.2 bits (55), Expect = 4.4 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +2 Query: 251 FKNVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 394 +KN +V E E K D ++ P ++ + N HH A+ S Sbjct: 90 YKNDDVAKEIESSKNQETDAKSEQAPFTEDASSSNYAHHRSADSQTKS 137 >SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 162 Score = 26.2 bits (55), Expect = 4.4 Identities = 21/85 (24%), Positives = 41/85 (48%) Frame = +3 Query: 24 NYIRARRTRSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDI 203 NYI+ R + D++ + + + +D + E+E A TIKD SL +N ++ Sbjct: 42 NYIQKR-----VQDELKQLQLRQKKAIDAIQ-EEEWKSNAKTIKDSQGSLDSN---LLSA 92 Query: 204 PVKVIVEEIKPSLKSDLKTLKCRMK 278 + E+++ + K LK ++K Sbjct: 93 EFRSFQEKLEKQSSINDKELKIKLK 117 >SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 459 Score = 25.8 bits (54), Expect = 5.9 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 8/53 (15%) Frame = +3 Query: 96 NVVDNLSSEQE--------LIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEI 230 NVVD+LS EQE L DQ N + NSLR+ +P + V++I Sbjct: 137 NVVDDLSKEQESRKESAPQLYDQINAFIEKVNSLRSG-----SVPFTITVDDI 184 >SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 1877 Score = 25.8 bits (54), Expect = 5.9 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 8/75 (10%) Frame = +3 Query: 60 PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD----IDN----SLRANKKEVIDIPVKV 215 PD A + L++ DN+SS NTI + ID+ +L N +++ + + + Sbjct: 434 PDSYLAAPKERLSISDNMSSSSSQTATVNTISNYLNVIDSVREIALTVNDEKIYGLAISL 493 Query: 216 IVEEIKPSLKSDLKT 260 ++++ S + T Sbjct: 494 LIQKFSRKFDSRVST 508 >SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces pombe|chr 1|||Manual Length = 1085 Score = 25.4 bits (53), Expect = 7.8 Identities = 16/46 (34%), Positives = 28/46 (60%) Frame = +3 Query: 114 SSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSD 251 S+ +EL+D+ KD+ +A K EV+D+ VK E+++ KS+ Sbjct: 465 STYKELMDRVQN-KDLLCQEQARKLEVLDLNVKSSREQLQYVSKSN 509 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,571,833 Number of Sequences: 5004 Number of extensions: 51220 Number of successful extensions: 238 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 238 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 317927284 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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