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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20988
         (686 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc...    30   0.36 
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac...    29   0.48 
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch...    27   1.9  
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy...    27   1.9  
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe...    27   1.9  
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak...    27   2.5  
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar...    27   3.4  
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph...    26   4.4  
SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|...    26   4.4  
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce...    26   5.9  
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ...    26   5.9  
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc...    25   7.8  

>SPAC6G9.04 |mug79||meiotically upregulated gene
           Mug79|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1318

 Score = 29.9 bits (64), Expect = 0.36
 Identities = 22/105 (20%), Positives = 53/105 (50%)
 Frame = +3

Query: 66  KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLK 245
           K P +E  P   V  L+ +   I    +I +++ +  ++  +V++ P + ++ +I+ +  
Sbjct: 377 KAPTSEAPPKGHVKQLAKQLGNIYMPQSINNVEPTSHSSISKVVN-PSEKVISKIERACL 435

Query: 246 SDLKTLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLK 380
           +    +   +KM K+  L      P PR++ +T+H+I +  ++ K
Sbjct: 436 AGNGNVHPSIKMEKNLEL-----NPHPRTLNATEHKINSRIQVSK 475


>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
           Hip3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1630

 Score = 29.5 bits (63), Expect = 0.48
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +2

Query: 467 KWYARTEQINELQAACNISKKISALRYKS*MKRYILLNQLTPSRPLLSRKRQIKLLLKQS 646
           +W + TEQ+ ELQ +C  S +   +   S  +  +L      S  ++   +Q++ LL+++
Sbjct: 586 RWKSLTEQVVELQPSCKSSSQRHLIIRNSWARNLLLRLTGCSSEAIVENFKQLRCLLQEN 645

Query: 647 N 649
           +
Sbjct: 646 S 646


>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 754

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 26/107 (24%), Positives = 44/107 (41%)
 Frame = +3

Query: 66  KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLK 245
           ++ E E     V+D    E+EL      +K  +N ++    E+   P +   +  K    
Sbjct: 646 EIEELEPVVQKVLDEEKQERELKIAERDLKKGENIMKYGD-EIRSRPARTWFQSEKDKQA 704

Query: 246 SDLKTLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLKKS 386
           S     K +  + K +      E+P  R+ K TK+  L+  K  KKS
Sbjct: 705 SKASEAKDKKSLAKRKKQMEKEEVP--RAYKKTKNDRLSNKKSTKKS 749


>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 4924

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -3

Query: 552  LLYLSAEIFLEMLQAAWSSLICSVRAY---HFPIPSDTS 445
            L  L AEI LE LQ +W  L C   A    HF I  D+S
Sbjct: 3894 LFSLDAEISLEKLQNSWKRL-CQKNAILRTHFAISEDSS 3931


>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 727

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +2

Query: 323 PPQHQEHETQNPEHHEDAEKIVSSVKNDIYTAGIALRQGFQEVSDGIGKWYARTEQ 490
           PP H ++ TQ    HEDA+    S  + ++   I  R  ++      G +    EQ
Sbjct: 609 PPLHLKNTTQTNNAHEDAQSSNLSQNHSLFYERIPQRPSYRIEKQNKGIYEDENEQ 664


>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 708

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
 Frame = +2

Query: 293 RPLVDLRNPGPPQHQEHE--TQNPEHHEDAEKIVSSVKNDIYTAG-----IALRQGFQEV 451
           RPL++LR P P    E +   +N ++    + I+ S  N+ +TA        ++ GF++ 
Sbjct: 597 RPLINLRQPKPLLRSEADCIIKNLQNFSTDDLIIKS--NEKFTAAKNSLINVIKSGFEQ- 653

Query: 452 SDGIGKWYARTEQINELQAAC 514
           ++ I  ++ +T  +  L   C
Sbjct: 654 NEFINPYFLQTNYLKNLLCCC 674


>SPBC26H8.09c |snf59||SWI/SNF complex subunit
           Snf59|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 515

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 284 EIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE 379
           E  +P  D RN GP Q  + + + PE H +++
Sbjct: 148 EEPKPSGDFRNEGPKQCDDSKIEKPELHVNSK 179


>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
           Phf2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 538

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 251 FKNVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 394
           +KN +V  E E  K    D ++   P  ++  + N  HH  A+    S
Sbjct: 90  YKNDDVAKEIESSKNQETDAKSEQAPFTEDASSSNYAHHRSADSQTKS 137


>SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 162

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 21/85 (24%), Positives = 41/85 (48%)
 Frame = +3

Query: 24  NYIRARRTRSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDI 203
           NYI+ R     + D++ + + +    +D +  E+E    A TIKD   SL +N   ++  
Sbjct: 42  NYIQKR-----VQDELKQLQLRQKKAIDAIQ-EEEWKSNAKTIKDSQGSLDSN---LLSA 92

Query: 204 PVKVIVEEIKPSLKSDLKTLKCRMK 278
             +   E+++     + K LK ++K
Sbjct: 93  EFRSFQEKLEKQSSINDKELKIKLK 117


>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 459

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
 Frame = +3

Query: 96  NVVDNLSSEQE--------LIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEI 230
           NVVD+LS EQE        L DQ N   +  NSLR+       +P  + V++I
Sbjct: 137 NVVDDLSKEQESRKESAPQLYDQINAFIEKVNSLRSG-----SVPFTITVDDI 184


>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1877

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
 Frame = +3

Query: 60  PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD----IDN----SLRANKKEVIDIPVKV 215
           PD    A  + L++ DN+SS        NTI +    ID+    +L  N +++  + + +
Sbjct: 434 PDSYLAAPKERLSISDNMSSSSSQTATVNTISNYLNVIDSVREIALTVNDEKIYGLAISL 493

Query: 216 IVEEIKPSLKSDLKT 260
           ++++      S + T
Sbjct: 494 LIQKFSRKFDSRVST 508


>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1085

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +3

Query: 114 SSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSD 251
           S+ +EL+D+    KD+    +A K EV+D+ VK   E+++   KS+
Sbjct: 465 STYKELMDRVQN-KDLLCQEQARKLEVLDLNVKSSREQLQYVSKSN 509


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,571,833
Number of Sequences: 5004
Number of extensions: 51220
Number of successful extensions: 238
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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