Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20985
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    47   1e-07
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   1.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   3.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.6  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 47.2 bits (107), Expect = 1e-07
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
 Frame = +1

Query: 346 EVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-*PN 522
           EV V+G +   P   FE +    ++ + VK  GY +PT IQ    P+ +SG++L++    
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204

Query: 523 GFRQNVGLHLA---SHCAHK*PTAIRRGDG-PIALVLAPTRELAQQIQQVAADF 672
           G  +     L    +  + K P         P+ ++++PTRELA QI      F
Sbjct: 205 GSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKF 258


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   VDPASERIHSLNKHLQLNPKN 63
           VDP SER+    + L++NP N
Sbjct: 511 VDPDSERMAFWQRILKINPNN 531


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   VDPASERIHSLNKHLQLNPKN 63
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   VDPASERIHSLNKHLQLNPKN 63
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 618 DQSNRTITSPNSG 580
           DQSNR + SP++G
Sbjct: 398 DQSNRAVFSPHAG 410


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 581 VGYLCAQWLARCRPTFCRN 525
           +GY+C   +  CRP  C N
Sbjct: 253 LGYICEINVDDCRPGACHN 271


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 150 GLATVAIDLEDLEALVGKKNSLEGRTCDA 236
           G+   +I+ +DL A  G KN+L     DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 196 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 38
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 196 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 38
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 173 LLVDYMKKNKTLGAACGRIHPI 194


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 487 LLVDYMKKNKTLGAACGRIHPI 508


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL  + K+N  LG AC  +  I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL    K+N NLG AC  +  +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL    K+N NLG AC  +  +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL    K+N NLG AC  +  +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 272 LLKGWSKQNPNLGVACSALQRI 207
           LL    K+N NLG AC  +  +
Sbjct: 747 LLIDLMKKNRNLGAACGRIHPV 768


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 91 AIIPITRHDYFSDLVEDVYL 32
          A++P+ +H     LV  VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,758
Number of Sequences: 336
Number of extensions: 3781
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)