Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20985
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 71 8e-13
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 55 6e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 54 1e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 54 1e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 54 1e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 50 2e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 42 3e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 42 3e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 42 3e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 40 0.002
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 40 0.002
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 40 0.002
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 39 0.003
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 39 0.003
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 39 0.004
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 39 0.004
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 39 0.004
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 39 0.004
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 38 0.005
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 38 0.005
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 37 0.012
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 37 0.012
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 37 0.012
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 36 0.037
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 34 0.086
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 34 0.086
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 31 1.1
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 30 1.4
Z92830-16|CAO82027.1| 197|Caenorhabditis elegans Hypothetical p... 30 1.9
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.9
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.4
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 3.2
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 29 4.3
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 29 4.3
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 29 4.3
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 29 4.3
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 28 7.5
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 28 7.5
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 93.1 bits (221), Expect = 2e-19
Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVK 435
L P K+FY + V +R YE++++ + ++VT+ G V P F EA P + + +
Sbjct: 87 LTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLY 146
Query: 436 TMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCAHK*PTAIR-RGDGPIA 612
+++PT IQ+ WPIAMSG+++++ + H A R RG+GP
Sbjct: 147 GK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 613 LVLAPTRELAQQIQQVAADF 672
LVL PTRELAQQ+Q+V+ DF
Sbjct: 206 LVLLPTRELAQQVQEVSIDF 225
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 79.4 bits (187), Expect = 2e-15
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKT 438
Q FNKNFY+ H + + +V +N + V G++ P F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 439 MGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCAH-K*PTAIRRGDGPIAL 615
Y++PTPIQA P A+SG++++ +L H ++ G+GP+A+
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAV 342
Query: 616 VLAPTRELAQQIQQVAADF 672
++ PTRELA Q+ Q A F
Sbjct: 343 IVVPTRELAIQVFQEAKKF 361
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 510
+R +++ G V P + +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 511 -A*PNGFRQNVGLHLA----SHCAHK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF 672
G + L K R GP A+++APTRELAQQI++ F
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKF 401
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQP 583
++TGSGKT A++LP +V I + P
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLP 367
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 70.9 bits (166), Expect = 8e-13
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 265 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPTQYFEEANFPDYVQQGVKTM 441
F KNFY + + + EV+ YR + + +TV G++ P + + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 442 GYKEPTPIQAQGWPIAMSGKNLVA*PN-GFRQNVGLHLASHCAHK*PTAIRRGDGPIALV 618
Y +PT IQAQ P MSG++++ G + + L + GDGPIA++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 619 LAPTRELAQQIQQVAADF 672
LAPTRELA Q + A F
Sbjct: 383 LAPTRELAMQTYKEANKF 400
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 54.8 bits (126), Expect = 6e-08
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGV-KTMGYKEPTP 462
P + ++S + E R + ++ G + P F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 463 IQAQGWPIAMSGKNLV---A*PNGFRQNVGLHLASHC-AHK*PTAIRRGDGPIALVLAPT 630
IQ QG P+A+SG++++ + +G L L C + R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 631 RELAQQI 651
RELA+QI
Sbjct: 276 RELARQI 282
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 53.6 bits (123), Expect = 1e-07
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPTQYFEEAN 405
F ++P ++ Y SP +++E Y N + V S V++ P FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 406 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVA*PN-------GFRQNVGLHLASH 561
+ G ++ G+++P+PIQ+Q WP+ +SG++ + F LH+ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Query: 562 CAHK*PTAIRRGDGPIALVLAPTRELAQQIQ 654
A + P LVL+PTRELAQQI+
Sbjct: 150 LAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQ 580
SQTGSGKTLA++LPA++HI+ Q
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQ 149
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 53.6 bits (123), Expect = 1e-07
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V ++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 505 LVA*P---NGFRQNVGLHLASHCAHK*PTAI--------RRGDGPIALVLAPTRELAQQI 651
L++ +G L + H P + RR P ALVL+PTRELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 652 QQVAADF 672
+ A F
Sbjct: 239 HKEATKF 245
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+QTGSGKT A++LP I HI
Sbjct: 183 AQTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 53.6 bits (123), Expect = 1e-07
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V ++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 505 LVA*P---NGFRQNVGLHLASHCAHK*PTAI--------RRGDGPIALVLAPTRELAQQI 651
L++ +G L + H P + RR P ALVL+PTRELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 652 QQVAADF 672
+ A F
Sbjct: 223 HKEATKF 229
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+QTGSGKT A++LP I HI
Sbjct: 167 AQTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 53.6 bits (123), Expect = 1e-07
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V ++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 505 LVA*P---NGFRQNVGLHLASHCAHK*PTAI--------RRGDGPIALVLAPTRELAQQI 651
L++ +G L + H P + RR P ALVL+PTRELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 652 QQVAADF 672
+ A F
Sbjct: 220 HKEATKF 226
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+QTGSGKT A++LP I HI
Sbjct: 164 AQTGSGKTAAFLLPIIQHI 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Frame = +1
Query: 349 VTVSGVEVHNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*P--- 519
V +G +V P F + + +++++ +KT GY PTP+Q P G++L++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 520 NGFRQNVGLHLASHCAHK*PTAI---------RRGDGPIALVLAPTRELAQQI 651
+G + L + P A+ R+ P ALVL+PTREL+ QI
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = +1
Query: 379 PTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLAS 558
P + F EAN + +Q+ V GY + TPIQ P+ G +++A L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 559 HCA-----HK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ TA G P ++L PTRELA QI F
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI---NNQPLFGE 595
+QTGSGKT A++LP + + NN GE
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGE 414
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = +1
Query: 379 PTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLAS 558
P + F EAN + +Q+ V GY + TPIQ P+ G +++A L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 559 HCA-----HK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ TA G P ++L PTRELA QI F
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI---NNQPLFGE 595
+QTGSGKT A++LP + + NN GE
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGE 414
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = +1
Query: 379 PTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLAS 558
P + F EAN + +Q+ V GY + TPIQ P+ G +++A L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 559 HCA-----HK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ TA G P ++L PTRELA QI F
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI---NNQPLFGE 595
+QTGSGKT A++LP + + NN GE
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGE 414
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-*PNGFRQNVGLHLASHCA 567
FE+ N + + GY +PTPIQ P+A++GK++ A G + L
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLP--IL 207
Query: 568 HK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADFWTHI 684
+ + LVL PTRELA Q+ QV T I
Sbjct: 208 ERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFI 246
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +1
Query: 379 PTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*P---NGFRQNVGLH 549
P + F +++ P +++ V+ GY TPIQ P+ GK+++A +G L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 550 LASHCAHK*PT--AIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ S + G P ++L PTRELA QI F
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +1
Query: 379 PTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*P---NGFRQNVGLH 549
P + F +++ P +++ V+ GY TPIQ P+ GK+++A +G L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 550 LASHCAHK*PT--AIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ S + G P ++L PTRELA QI F
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/105 (24%), Positives = 48/105 (45%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCAH 570
F++ + + +G+ G+++P+ IQ + P + ++++A S
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS-VLQ 86
Query: 571 K*PTAIRRGDGPIALVLAPTRELAQQIQQVAADFWTHILCS*HVC 705
T +R AL+L+PTRELA QIQ+V ++ H C
Sbjct: 87 SLDTQVRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHAC 128
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/105 (24%), Positives = 48/105 (45%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCAH 570
F++ + + +G+ G+++P+ IQ + P + ++++A S
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS-VLQ 86
Query: 571 K*PTAIRRGDGPIALVLAPTRELAQQIQQVAADFWTHILCS*HVC 705
T +R AL+L+PTRELA QIQ+V ++ H C
Sbjct: 87 SLDTQVRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHAC 128
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PN---GFRQNVGLHLASH 561
F++ + + +G+ G+++P+ IQ + +GK+++A G + +
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 562 CAHK*PTAIRRGDGPIALVLAPTRELAQQIQQV 660
H+ P ALV+APTRELAQQIQ+V
Sbjct: 91 IDHEDPHVQ-------ALVMAPTRELAQQIQKV 116
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PN---GFRQNVGLHLASH 561
F++ + + +G+ G+++P+ IQ + +GK+++A G + +
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 562 CAHK*PTAIRRGDGPIALVLAPTRELAQQIQQV 660
H+ P ALV+APTRELAQQIQ+V
Sbjct: 91 IDHEDPHVQ-------ALVMAPTRELAQQIQKV 116
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +1
Query: 373 HNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHL 552
H +++ V + ++ G+ +PTPIQ + P M GK++VA R G
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA---MSRTGSGKTA 76
Query: 553 ASHCAHK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF--WTHILCS 693
A R G AL+++PTRELA Q +V + +T + C+
Sbjct: 77 AFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCA 125
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +1
Query: 373 HNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHL 552
H +++ V + ++ G+ +PTPIQ + P M GK++VA R G
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA---MSRTGSGKTA 76
Query: 553 ASHCAHK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF--WTHILCS 693
A R G AL+++PTRELA Q +V + +T + C+
Sbjct: 77 AFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCA 125
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 589 RRGDGPIALVLAPTRELAQQIQQ 657
R+ DGP+AL+LAPTRELA QI +
Sbjct: 455 RQDDGPLALILAPTRELAAQIHE 477
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +1
Query: 427 GVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCAHK*PTAIRRGDGP 606
G+ G+++P+PIQ +A++G++++A G + K A++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIP-VIEKIQPALKAIQ-- 113
Query: 607 IALVLAPTRELAQQIQQVAADFWTHI 684
A+V+ PTRELA Q Q+ + HI
Sbjct: 114 -AMVIVPTRELALQTSQICVELSKHI 138
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.012
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCA- 567
F EAN + +++ V GY + TPIQ P+ G +++A L A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 ----HK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ TA G P ++L PTREL QI F
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+QTGSGKT A++LP + +
Sbjct: 596 AQTGSGKTAAFLLPIMARL 614
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.012
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCA- 567
F EAN + +++ V GY + TPIQ P+ G +++A L A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 ----HK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ TA G P ++L PTREL QI F
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+QTGSGKT A++LP + +
Sbjct: 596 AQTGSGKTAAFLLPIMARL 614
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.012
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCA- 567
F EAN + +++ V GY + TPIQ P+ G +++A L A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 ----HK*PTAIRRGDGPIALVLAPTRELAQQIQQVAADF 672
+ TA G P ++L PTREL QI F
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+QTGSGKT A++LP + +
Sbjct: 596 AQTGSGKTAAFLLPIMARL 614
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 35.5 bits (78), Expect = 0.037
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +1
Query: 409 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN--LVA*PNGFRQNV--GLHLASHCAHK* 576
P+ V + ++ MG+ EPT IQ+ P A+ + L A G + + G+ L +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 577 P----TAIRRGDGPIALVLAPTRELAQQIQQ 657
T GP AL++APTREL QI +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 34.3 bits (75), Expect = 0.086
Identities = 28/92 (30%), Positives = 43/92 (46%)
Frame = +1
Query: 382 TQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASH 561
T+ F + ++ Q ++TM K TP+QA P + G +++ R G LA
Sbjct: 88 TKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCA---RTGTGKTLAFA 144
Query: 562 CAHK*PTAIRRGDGPIALVLAPTRELAQQIQQ 657
++ G AL+L PTRELA QI +
Sbjct: 145 IPILQKLSVDPY-GIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 34.3 bits (75), Expect = 0.086
Identities = 28/92 (30%), Positives = 43/92 (46%)
Frame = +1
Query: 382 TQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASH 561
T+ F + ++ Q ++TM K TP+QA P + G +++ R G LA
Sbjct: 88 TKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCA---RTGTGKTLAFA 144
Query: 562 CAHK*PTAIRRGDGPIALVLAPTRELAQQIQQ 657
++ G AL+L PTRELA QI +
Sbjct: 145 IPILQKLSVDPY-GIYALILTPTRELAFQIAE 175
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 31.1 bits (67), Expect = 0.80
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = +1
Query: 298 VLKRSPYEVEEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 477
V KR +++ R + + G + N F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 478 WPIAMSGKNLVA*-PNGFRQNVGLHLAS-----HCAHK*PTAIRRGDGPIALVLAPTREL 639
P +N++A P G + + L + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 640 AQQ 648
A Q
Sbjct: 217 AAQ 219
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPL 586
S TGSGKTLA++LP + I N L
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKL 76
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVHINNQP 583
TGSGKT+ Y+LP + + ++P
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP 185
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCAH 570
F E + + +G+ +P+ IQ P A+ GK+++ G + +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVI----GLAETGSGKTGAFAIP 101
Query: 571 K*PTAIRRGDGPIALVLAPTRELAQQIQQ 657
+ + LVL PTRELA QI Q
Sbjct: 102 VLQSLLDHPQAFFCLVLTPTRELAFQIGQ 130
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAI 562
++TGSGKTLA++LPAI
Sbjct: 112 AKTGSGKTLAFLLPAI 127
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PN-GFRQNVGLHL-ASHCAHK*PTAIRRG 597
+ V+ +G+ T IQA+ + GK+++A G + + L A HK G
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNG 140
Query: 598 DGPIALVLAPTRELAQQIQQVAAD 669
G I +++PTREL+ Q V ++
Sbjct: 141 TGVI--IVSPTRELSMQTYGVLSE 162
>Z92830-16|CAO82027.1| 197|Caenorhabditis elegans Hypothetical
protein F11A5.17 protein.
Length = 197
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 572 NNQPLFGEVMVRLLWSWRLPES*HNKFSKLL-QIFGHTSYVRNTC 703
NN L+ E V WSW+ E N LL Q G +Y+ + C
Sbjct: 71 NNSRLWNESWVSSHWSWKGKEGTRNTIKILLYQFKGKKTYINHLC 115
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 7 PASERIHSLNKHLQLNPKNNHVW 75
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 93 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 209
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 148 RRIIAEFVASSKFGTTVSTAIIPI 77
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 148 RRIIAEFVASSKFGTTVSTAIIPI 77
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVH 568
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PNGFRQNVGLHLASHCAH 570
F + + + + + +G+++ +Q +A+ KN++ G L
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIP-LVQ 149
Query: 571 K*PTAIRRGDG---PIALVLAPTRELAQQIQQV 660
K + DG P A+++APT+EL QI ++
Sbjct: 150 KLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 453 TDAHSSSRLADSYVWKEFSGVAKRVPAKRWP 545
TDA R+A S++ + RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 601 GPIALVLAPTRELAQQIQQ 657
GP AL++APTREL QI +
Sbjct: 68 GPRALIVAPTRELVIQIMK 86
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+ TGSGKTLA+++P ++ +
Sbjct: 780 AHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI 571
+ TGSGKTLA+++P ++ +
Sbjct: 780 AHTGSGKTLAFLIPFVIKL 798
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMG 444
P PTVL SP+ V N +V ++ + TQ A D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQV-LTHQRLLQMTQANPRA-VDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPTQYFEEANFPDYVQQGVKTMG 444
P PTVL SP+ V N +V ++ + TQ A D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQV-LTHQRLLQMTQANPRA-VDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,804,629
Number of Sequences: 27780
Number of extensions: 349323
Number of successful extensions: 1179
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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