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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20983
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899...    62   6e-10
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671...    56   2e-08
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274...    44   1e-04
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937...    44   1e-04
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681...    40   0.003
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319     36   0.046
02_05_1202 + 34932291-34933027,34933297-34933774                       35   0.061
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188     35   0.080
03_01_0249 - 1935355-1935827,1936129-1936330                           34   0.14 
10_06_0036 - 9914606-9915561,9916287-9916368                           33   0.32 
07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709           31   1.3  
09_04_0182 + 15376025-15376498                                         30   1.7  
03_02_0620 + 9916684-9917336,9919219-9919492,9920502-9920585,992...    30   2.3  
02_04_0633 - 24616563-24617279                                         30   2.3  
01_01_0735 + 5730783-5733320                                           29   4.0  
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111     29   5.3  
08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766     29   5.3  
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84...    29   5.3  
03_03_0142 + 14800317-14801240                                         29   5.3  
01_04_0027 + 15216424-15216672                                         29   5.3  
08_01_0148 + 1172975-1173340                                           28   9.2  

>06_03_0529 -
           21788132-21788395,21788414-21788511,21789458-21789953,
           21790033-21790134,21790218-21790270,21790354-21790414,
           21790491-21790640,21791298-21791350,21794125-21794152
          Length = 434

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = +1

Query: 1   VKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA----NESLRG 168
           V++  NF  G +NK+ +FLK  P GK+P  E+ +G V   ESNAIA YVA    N SL G
Sbjct: 52  VELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVF--ESNAIARYVARLKDNSSLCG 109

Query: 169 GDLATQARVWQWASWSDSELLPASCAWVF 255
             L   + + QW  +S +E+      W++
Sbjct: 110 SSLIDYSHIEQWMDFSATEVDANIGRWLY 138



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 26/81 (32%), Positives = 43/81 (53%)
 Frame = +3

Query: 255 PYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHV 434
           P LG   +     E A + L  +L  L+ HL + T+LV   +TLAD+++   L + F  +
Sbjct: 139 PRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRI 198

Query: 435 LDPSVRSSLINVQRWFLTVAH 497
           L  S  S   +V+R+F T+ +
Sbjct: 199 LIKSFTSEFPHVERYFWTMVN 219


>02_02_0095 +
           6716327-6716335,6717302-6717451,6717523-6717583,
           6717646-6717725,6717802-6717903,6717982-6718471,
           6718796-6719171,6720320-6720379,6720887-6721056,
           6721287-6721340,6721384-6721523,6722362-6722511,
           6722582-6722642,6722705-6722784,6722933-6723034,
           6723111-6723612,6724401-6724776,6725419-6725493,
           6726058-6726198,6726264-6726282
          Length = 1065

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
 Frame = +1

Query: 1   VKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANES------- 159
           V++A NF  G +NK+ ++LK  P GKVP  E+ DG V   ESNAIA YV + S       
Sbjct: 589 VELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPVF--ESNAIARYVLSSSHFPEVTR 646

Query: 160 ------LRGGDLATQARVWQWASWSDSELLPASCAWVF 255
                 L G  L   A + QW  +S +E+   +  W+F
Sbjct: 647 SKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLF 684



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
 Frame = +1

Query: 1   VKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV----------- 147
           V++  NF  G +NK+ +FLK  P GK+P  E+ DG V   ESNAIA YV           
Sbjct: 28  VELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVF--ESNAIARYVLSHCHFPEVTR 85

Query: 148 --ANESLRGGDLATQARVWQWASWSDSELLPASCAWVF 255
             A+  L G  L   A + QW  +S +E+      W++
Sbjct: 86  SKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLY 123



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 26/81 (32%), Positives = 44/81 (54%)
 Frame = +3

Query: 255 PYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHV 434
           P LGI  +   + E A + L  +L  L+ HL + T+LV   +TLAD+++   L   F  +
Sbjct: 124 PRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARI 183

Query: 435 LDPSVRSSLINVQRWFLTVAH 497
           +  S  S   +V+R+F T+ +
Sbjct: 184 MTKSFTSEFPHVERYFWTMVN 204



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/81 (29%), Positives = 43/81 (53%)
 Frame = +3

Query: 255 PYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHV 434
           P LG   +   + E A + L  +L  L+ HL + T+LV   +TLAD+++   L   F  +
Sbjct: 685 PRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARI 744

Query: 435 LDPSVRSSLINVQRWFLTVAH 497
           +  +  S   +V+R+F T+ +
Sbjct: 745 MTKNFTSEFPHVERYFWTMVN 765


>05_01_0350 +
           2736096-2736242,2736460-2736508,2736704-2737046,
           2743911-2744499
          Length = 375

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
 Frame = +1

Query: 7   VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-----ESLRGG 171
           VA +   GE N+S   L + P GK+PAFE  DG+V L ES AI  YV       + LR G
Sbjct: 31  VAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYVLRNYNKPDLLREG 87

Query: 172 DLATQARVWQW 204
           +L   A V  W
Sbjct: 88  NLEESAMVDMW 98


>01_01_1176 -
           9372879-9373097,9373814-9374278,9374372-9375447,
           9375534-9375687,9375783-9375879,9376238-9376374
          Length = 715

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/63 (36%), Positives = 36/63 (57%)
 Frame = +3

Query: 306 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFL 485
           S+  AA   LDG+L +RTFLV+  +++AD++V+S L    Q            N+ RWF 
Sbjct: 93  SEFEAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFN 152

Query: 486 TVA 494
           ++A
Sbjct: 153 SIA 155


>10_06_0131 -
           11066033-11066251,11066548-11067012,11067102-11068177,
           11068269-11068422,11068511-11068601,11069016-11069152
          Length = 713

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +3

Query: 306 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWF 482
           S+   A   +DG+L++RTFLV   +T+AD+ V+S L    Q            N+ RWF
Sbjct: 91  SEFEVACSFVDGYLMSRTFLVGHVLTIADITVWSNLAGIGQRWESLRKSKKYQNLVRWF 149


>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
          Length = 221

 Score = 35.5 bits (78), Expect = 0.046
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
 Frame = +1

Query: 25  FGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANES--------LRGGDL 177
           FG+  +K  D L + P G+VPAF+  DG ++L ES AI  Y+  +         LR GD 
Sbjct: 36  FGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICRYILRKHRATDEANLLREGDP 93

Query: 178 ATQARVWQW 204
           +  A V  W
Sbjct: 94  SESAVVDAW 102


>02_05_1202 + 34932291-34933027,34933297-34933774
          Length = 404

 Score = 35.1 bits (77), Expect = 0.061
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = +3

Query: 279 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLL 416
           +++  + A  +L AAL  L+ HL    +L  + +TLADV +F+TL+
Sbjct: 252 SQEAYDAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLFTTLV 297


>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
          Length = 216

 Score = 34.7 bits (76), Expect = 0.080
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +1

Query: 37  NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV----ANESLRGGDLATQARVWQW 204
           +K    + + P G+VPAFE  DG + L ES AI+ Y+     ++ LR  +L+  A V  W
Sbjct: 41  HKRPPHISRNPFGQVPAFE--DGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVW 98

Query: 205 ASWSDSELLPASCAWVF 255
                S    A    +F
Sbjct: 99  LEVESSHFDGAMSPIIF 115


>03_01_0249 - 1935355-1935827,1936129-1936330
          Length = 224

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 37  NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 192
           +KS  FLK  P G+VPAF+  D    + ES AI  Y+ ++    G+     R
Sbjct: 42  HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91


>10_06_0036 - 9914606-9915561,9916287-9916368
          Length = 345

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 425 PARARPERPFVADKRSALVPDRRPPATS-SAVVGSLTLCAAPPT 553
           PA A P  P V     A  P    PAT   A  G +  C+APPT
Sbjct: 195 PAAAPPSTPVVVVPAPATSPPMSMPATPPEAAAGGMAPCSAPPT 238


>07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709
          Length = 191

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = +3

Query: 294 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV--FSTLLHAF-QHV 434
           E AK++LL  L+ L+G L  R+F   +     D+++  FS++ H + QH+
Sbjct: 110 EMAKAELLDQLRRLEGVLGDRSFFSGDEFGFLDIVLIPFSSMFHGYKQHM 159


>09_04_0182 + 15376025-15376498
          Length = 157

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 552 VGGAAQSVSEPTTAELVAGGRRSGTNAERLSATNGRSGL 436
           VGGA+ S      +   +GG R+G++A   + ++G SGL
Sbjct: 101 VGGASSSAGSSAGSSAGSGGSRTGSSAGSSAGSSGGSGL 139


>03_02_0620 +
           9916684-9917336,9919219-9919492,9920502-9920585,
           9921295-9921356,9921699-9921762
          Length = 378

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -1

Query: 570 YFLGSYVGGAAQSVSEPTTAELVAGGRRSGTNAERLSATNG----RSGLARAGKHA 415
           + +G + G A  SVS+ T+A + AGG  S      L AT G    RS LA+A   A
Sbjct: 34  FVMGFFTGFAPSSVSDWTSAAVSAGGVGSSHVVRSLHATGGAAVNRSLLAQAAAGA 89


>02_04_0633 - 24616563-24617279
          Length = 238

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 128 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTVNYC 232
           MP+ TT+ M+ S  + W P+     G HG  VN+C
Sbjct: 1   MPAATTIQMEASPADHWSPRHRRRCGCHG--VNWC 33


>01_01_0735 + 5730783-5733320
          Length = 845

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 12  TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKSA 113
           T F +W D +   + +E SC+K  C+  C  K+A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404


>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
          Length = 553

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 349 SHAPSLLPRESHLPMSLSS 405
           +H PSL+P ESHL  S+SS
Sbjct: 498 NHQPSLVPNESHLNNSVSS 516


>08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766
          Length = 310

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = -2

Query: 728 ASSRRGPWTP*AFQAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSV---HQLTPG 570
           A  ++GPWTP          QE   P +W A+  +T  + C  SC +   + L PG
Sbjct: 10  AEVKKGPWTPEEDLMLVAYVQEH-GPGNWRAVPTNTGLMRCSKSCRLRWTNYLRPG 64


>05_01_0123 -
           846081-846167,846264-846404,846749-846866,847382-847528,
           848439-848441,848590-848627,848808-848851,848959-849016
          Length = 211

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 52  FLKKFPAGKVPAFESADGK 108
           FLK  P GKVP F   DGK
Sbjct: 49  FLKISPEGKVPVFNGGDGK 67


>03_03_0142 + 14800317-14801240
          Length = 307

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = -2

Query: 719 RRGPWTP*AFQAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSV---HQLTPG 570
           ++GPWTP          QE   P +W A+   T  L C  SC +   + L PG
Sbjct: 13  KKGPWTPEEDMVLASYVQEH-GPGNWRAVPPRTGLLRCSKSCRLRWTNYLRPG 64


>01_04_0027 + 15216424-15216672
          Length = 82

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 237 FLCLGLPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADV 395
           F C+  P L  +  N++ V+     L   L+V + HL   T+L  E ++ A++
Sbjct: 22  FQCIINPALHGIPTNQKIVDETVEKLKKVLEVYEAHLSENTYLAGEFVSFANI 74


>08_01_0148 + 1172975-1173340
          Length = 121

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 458 ADKRSALVP-DRRPPATSSAVVGSLTLCAAPPTYDPK 565
           A+ R+  V   RR P T+S +  S  L  APP+ +PK
Sbjct: 23  ANTRATFVSFPRRSPPTTSLLSASSALAPAPPSANPK 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,326,805
Number of Sequences: 37544
Number of extensions: 494733
Number of successful extensions: 1689
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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