BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20983 (756 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 80 1e-15 Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 80 1e-15 Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 34 0.13 Z92849-2|CAB07424.1| 83|Caenorhabditis elegans Hypothetical pr... 31 0.67 Z78067-7|CAB01527.1| 83|Caenorhabditis elegans Hypothetical pr... 31 0.67 U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.67 U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.67 U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.67 U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 1.2 AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 2.7 AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.7 Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 29 3.6 U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 6.2 L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 6.2 L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 6.2 L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 28 6.2 AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isofor... 28 6.2 AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 28 6.2 AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 28 6.2 AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 6.2 AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 28 6.2 AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 28 6.2 Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 28 8.2 AL132876-31|CAI79186.1| 120|Caenorhabditis elegans Hypothetical... 28 8.2 >Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical protein F17C11.9b protein. Length = 373 Score = 80.2 bits (189), Expect = 1e-15 Identities = 40/82 (48%), Positives = 57/82 (69%) Frame = +3 Query: 252 LPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQH 431 LP + F+K+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+ Sbjct: 68 LPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQY 127 Query: 432 VLDPSVRSSLINVQRWFLTVAH 497 VLD + R S++NV RWF TV + Sbjct: 128 VLDANARKSIVNVTRWFRTVVN 149 >Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical protein F17C11.9a protein. Length = 398 Score = 80.2 bits (189), Expect = 1e-15 Identities = 40/82 (48%), Positives = 57/82 (69%) Frame = +3 Query: 252 LPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQH 431 LP + F+K+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+ Sbjct: 93 LPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQY 152 Query: 432 VLDPSVRSSLINVQRWFLTVAH 497 VLD + R S++NV RWF TV + Sbjct: 153 VLDANARKSIVNVTRWFRTVVN 174 Score = 31.9 bits (69), Expect = 0.51 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = +1 Query: 61 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 240 KFP G PAFE G LL + +I ++ S A QW +++ LLPA Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88 Query: 241 CAWVFLTLVSCN 276 +V ++ + N Sbjct: 89 LGYVLPSVSAAN 100 >Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical protein F17C11.9c protein. Length = 365 Score = 33.9 bits (74), Expect = 0.13 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +3 Query: 426 QHVLDPSVRSSLINVQRWFLTVAH 497 Q+VLD + R S++NV RWF TV + Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVN 141 Score = 31.9 bits (69), Expect = 0.51 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = +1 Query: 61 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 240 KFP G PAFE G LL + +I ++ S A QW +++ LLPA Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88 Query: 241 CAWVFLTLVSCN 276 +V ++ + N Sbjct: 89 LGYVLPSVSAAN 100 >Z92849-2|CAB07424.1| 83|Caenorhabditis elegans Hypothetical protein H12D21.3 protein. Length = 83 Score = 31.5 bits (68), Expect = 0.67 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = -1 Query: 561 GSYVGGAAQSVSEPTTAELVAGGRRSGTNAERLSATNGRSGLARAGK 421 G GG ++ + TTA +GG +G ++++ T+G SG ++G+ Sbjct: 27 GQQNGGENKNGGKATTASNGSGGAPNGQGNQKIAGTDGNSGNGKSGQ 73 >Z78067-7|CAB01527.1| 83|Caenorhabditis elegans Hypothetical protein ZC412.8 protein. Length = 83 Score = 31.5 bits (68), Expect = 0.67 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = -1 Query: 561 GSYVGGAAQSVSEPTTAELVAGGRRSGTNAERLSATNGRSGLARAGK 421 G GG ++ + TTA +GG +G ++++ T+G SG ++G+ Sbjct: 27 GQQNGGENKNGGKATTASNGSGGAPNGQGNQKIAGTDGNSGNGKSGQ 73 >U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of presynaptic activity protein. Length = 1409 Score = 31.5 bits (68), Expect = 0.67 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +1 Query: 10 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 189 +P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084 Query: 190 RVWQ 201 ++WQ Sbjct: 1085 QIWQ 1088 >U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion defective protein3, isoform b protein. Length = 1408 Score = 31.5 bits (68), Expect = 0.67 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +1 Query: 10 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 189 +P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084 Query: 190 RVWQ 201 ++WQ Sbjct: 1085 QIWQ 1088 >U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion defective protein3, isoform a protein. Length = 1409 Score = 31.5 bits (68), Expect = 0.67 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +1 Query: 10 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 189 +P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084 Query: 190 RVWQ 201 ++WQ Sbjct: 1085 QIWQ 1088 >U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein ZK430.1 protein. Length = 1650 Score = 30.7 bits (66), Expect = 1.2 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 160 DFHWQRSKRWHCFQLGALFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 11 DF W+RSK W Q ++ R SS+ S+ TC + IR++V Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203 >AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical protein Y59A8B.9 protein. Length = 187 Score = 29.5 bits (63), Expect = 2.7 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = +2 Query: 410 TAACFPARARPERPFVADKRSALVPDRRPPATSSAVVGSLT-----LCAAPPTYDPKKYQ 574 T A P R P R A + +A P PP T + V S + AAPP D + Sbjct: 46 TPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDMATFN 105 Query: 575 EL 580 +L Sbjct: 106 KL 107 >AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical protein Y59A8B.7 protein. Length = 316 Score = 29.5 bits (63), Expect = 2.7 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = +2 Query: 410 TAACFPARARPERPFVADKRSALVPDRRPPATSSAVVGSLT-----LCAAPPTYDPKKYQ 574 T A P R P R A + +A P PP T + V S + AAPP D + Sbjct: 175 TPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDMATFN 234 Query: 575 EL 580 +L Sbjct: 235 KL 236 >Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical protein T24D5.5 protein. Length = 408 Score = 29.1 bits (62), Expect = 3.6 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = -3 Query: 151 WQRSKRWHCFQLGALFHRHFRMQALFRQETSSRSLRTCWSRQIRNSV 11 W+R +R H ++G+ RHF+ + + SL CW R + V Sbjct: 304 WKRYQRKH--KMGSEETRHFKGSSSLSNMNAQSSLMVCWKRSTDDRV 348 >U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical protein F18G5.4 protein. Length = 615 Score = 28.3 bits (60), Expect = 6.2 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = -1 Query: 204 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*EHFSIGT-FECRHFSGRKLLQEVFGLVG 34 P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+ Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568 Query: 33 LAKYEIR 13 L ++EIR Sbjct: 569 LQQHEIR 575 >L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical protein C02D5.3c protein. Length = 254 Score = 28.3 bits (60), Expect = 6.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 40 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147 K + F K G+VPA E +GK ++ ES I Y+ Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97 >L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical protein C02D5.3a protein. Length = 537 Score = 28.3 bits (60), Expect = 6.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 40 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147 K + F K G+VPA E +GK ++ ES I Y+ Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380 >L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene protein. Length = 813 Score = 28.3 bits (60), Expect = 6.2 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510 Q+P + G SS VA HT L P S +++PG F R R A R RP Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465 >AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isoform 3 protein. Length = 769 Score = 28.3 bits (60), Expect = 6.2 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510 Q+P + G SS VA HT L P S +++PG F R R A R RP Sbjct: 365 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 421 >AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2 protein. Length = 813 Score = 28.3 bits (60), Expect = 6.2 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510 Q+P + G SS VA HT L P S +++PG F R R A R RP Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465 >AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. Length = 813 Score = 28.3 bits (60), Expect = 6.2 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510 Q+P + G SS VA HT L P S +++PG F R R A R RP Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465 >AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical protein K10F12.4a protein. Length = 309 Score = 28.3 bits (60), Expect = 6.2 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 Query: 52 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147 +L K P G+VPA E +GKV + ESN I Y+ Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167 >AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell lineage protein 45,isoform b protein. Length = 614 Score = 28.3 bits (60), Expect = 6.2 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510 Q+P + G SS VA HT L P S +++PG F R R A R RP Sbjct: 451 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 507 >AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell lineage protein 45,isoform a protein. Length = 813 Score = 28.3 bits (60), Expect = 6.2 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510 Q+P + G SS VA HT L P S +++PG F R R A R RP Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465 >Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical protein F13A7.10 protein. Length = 254 Score = 27.9 bits (59), Expect = 8.2 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 40 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147 K + + K G+VP E A+GK L+ ES I Y+ Sbjct: 62 KPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYL 97 >AL132876-31|CAI79186.1| 120|Caenorhabditis elegans Hypothetical protein Y105E8A.32 protein. Length = 120 Score = 27.9 bits (59), Expect = 8.2 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = +2 Query: 401 LQYTAACFPARARPERPFVADKRSALVPDRRPPATSSAVVGSLTLCAAPP 550 L +C P PE P V K A P+ P +G+ +CAAPP Sbjct: 9 LPLVQSCIPM-VPPEAPIVPPKLQA-DPNIDPNTRPRIFIGARRVCAAPP 56 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,970,914 Number of Sequences: 27780 Number of extensions: 371191 Number of successful extensions: 1166 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1099 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1160 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1798543458 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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