Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20983
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 34 0.13
Z92849-2|CAB07424.1| 83|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z78067-7|CAB01527.1| 83|Caenorhabditis elegans Hypothetical pr... 31 0.67
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.67
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.67
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.67
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 2.7
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.7
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 29 3.6
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 6.2
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 6.2
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 6.2
L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncog... 28 6.2
AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isofor... 28 6.2
AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isofor... 28 6.2
AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein. 28 6.2
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell... 28 6.2
AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell... 28 6.2
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL132876-31|CAI79186.1| 120|Caenorhabditis elegans Hypothetical... 28 8.2
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = +3
Query: 252 LPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQH 431
LP + F+K+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+
Sbjct: 68 LPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQY 127
Query: 432 VLDPSVRSSLINVQRWFLTVAH 497
VLD + R S++NV RWF TV +
Sbjct: 128 VLDANARKSIVNVTRWFRTVVN 149
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = +3
Query: 252 LPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQH 431
LP + F+K+ VE+ K++L L+VLD L+ +T+LV ER++LADV V LL AFQ+
Sbjct: 93 LPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQY 152
Query: 432 VLDPSVRSSLINVQRWFLTVAH 497
VLD + R S++NV RWF TV +
Sbjct: 153 VLDANARKSIVNVTRWFRTVVN 174
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 61 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 240
KFP G PAFE G LL + +I ++ S A QW +++ LLPA
Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88
Query: 241 CAWVFLTLVSCN 276
+V ++ + N
Sbjct: 89 LGYVLPSVSAAN 100
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 426 QHVLDPSVRSSLINVQRWFLTVAH 497
Q+VLD + R S++NV RWF TV +
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVN 141
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 61 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 240
KFP G PAFE G LL + +I ++ S A QW +++ LLPA
Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88
Query: 241 CAWVFLTLVSCN 276
+V ++ + N
Sbjct: 89 LGYVLPSVSAAN 100
>Z92849-2|CAB07424.1| 83|Caenorhabditis elegans Hypothetical
protein H12D21.3 protein.
Length = 83
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -1
Query: 561 GSYVGGAAQSVSEPTTAELVAGGRRSGTNAERLSATNGRSGLARAGK 421
G GG ++ + TTA +GG +G ++++ T+G SG ++G+
Sbjct: 27 GQQNGGENKNGGKATTASNGSGGAPNGQGNQKIAGTDGNSGNGKSGQ 73
>Z78067-7|CAB01527.1| 83|Caenorhabditis elegans Hypothetical
protein ZC412.8 protein.
Length = 83
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -1
Query: 561 GSYVGGAAQSVSEPTTAELVAGGRRSGTNAERLSATNGRSGLARAGK 421
G GG ++ + TTA +GG +G ++++ T+G SG ++G+
Sbjct: 27 GQQNGGENKNGGKATTASNGSGGAPNGQGNQKIAGTDGNSGNGKSGQ 73
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 10 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 189
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 190 RVWQ 201
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 10 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 189
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 190 RVWQ 201
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 10 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 189
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 190 RVWQ 201
++WQ
Sbjct: 1085 QIWQ 1088
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 160 DFHWQRSKRWHCFQLGALFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 11
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +2
Query: 410 TAACFPARARPERPFVADKRSALVPDRRPPATSSAVVGSLT-----LCAAPPTYDPKKYQ 574
T A P R P R A + +A P PP T + V S + AAPP D +
Sbjct: 46 TPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDMATFN 105
Query: 575 EL 580
+L
Sbjct: 106 KL 107
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +2
Query: 410 TAACFPARARPERPFVADKRSALVPDRRPPATSSAVVGSLT-----LCAAPPTYDPKKYQ 574
T A P R P R A + +A P PP T + V S + AAPP D +
Sbjct: 175 TPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDMATFN 234
Query: 575 EL 580
+L
Sbjct: 235 KL 236
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 151 WQRSKRWHCFQLGALFHRHFRMQALFRQETSSRSLRTCWSRQIRNSV 11
W+R +R H ++G+ RHF+ + + SL CW R + V
Sbjct: 304 WKRYQRKH--KMGSEETRHFKGSSSLSNMNAQSSLMVCWKRSTDDRV 348
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -1
Query: 204 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*EHFSIGT-FECRHFSGRKLLQEVFGLVG 34
P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568
Query: 33 LAKYEIR 13
L ++EIR
Sbjct: 569 LQQHEIR 575
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 40 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 40 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>L15347-1|AAA28142.1| 813|Caenorhabditis elegans raf proto-oncogene
protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -2
Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>AY493414-1|AAR86713.1| 769|Caenorhabditis elegans LIN-45 isoform 3
protein.
Length = 769
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -2
Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 365 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 421
>AY493413-1|AAR86712.1| 813|Caenorhabditis elegans LIN-45 isoform 2
protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -2
Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>AY455928-1|AAR26307.1| 813|Caenorhabditis elegans LIN-45 protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -2
Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 52 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>AC024204-7|AAM97982.1| 614|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform b protein.
Length = 614
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -2
Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 451 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 507
>AC024204-6|AAF36042.1| 813|Caenorhabditis elegans Abnormal cell
lineage protein 45,isoform a protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -2
Query: 689 QAPPLQGQEQLPPSSWVALSFHTSYLFCPPSCSVHQLTPGTF*GRM*EEPHRA*ASRRRP 510
Q+P + G SS VA HT L P S +++PG F R R A R RP
Sbjct: 409 QSPNVSGSTT---SSLVAAHLHTLPLTPPQSAPPQKISPGFFRNRSRSPGERLDAQRPRP 465
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 40 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 147
K + + K G+VP E A+GK L+ ES I Y+
Sbjct: 62 KPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYL 97
>AL132876-31|CAI79186.1| 120|Caenorhabditis elegans Hypothetical
protein Y105E8A.32 protein.
Length = 120
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 401 LQYTAACFPARARPERPFVADKRSALVPDRRPPATSSAVVGSLTLCAAPP 550
L +C P PE P V K A P+ P +G+ +CAAPP
Sbjct: 9 LPLVQSCIPM-VPPEAPIVPPKLQA-DPNIDPNTRPRIFIGARRVCAAPP 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,970,914
Number of Sequences: 27780
Number of extensions: 371191
Number of successful extensions: 1166
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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