Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20979
         (491 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   2.5  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   5.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -2

Query: 139  HQLRQHHHPPG*EQSKH 89
            HQL QHHH P   QS H
Sbjct: 1328 HQL-QHHHQPQLSQSSH 1343


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 193 ANMALHLQPPLSRWWKFSHQLRQHHHP 113
           A+  LH QP  +      H    HHHP
Sbjct: 142 AHHPLHYQPAAAAAMHHHHHHPHHHHP 168


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 170 AAAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFSFE 51
           +A  + V IF+P +  SSS+   AE + + S+ DT FS E
Sbjct: 655 SAEMRTVLIFAPSSNQSSSSTPNAEQSPSASSKDT-FSNE 693


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,191
Number of Sequences: 2352
Number of extensions: 6853
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)