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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20978
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical ...    31   1.2  
AF016677-8|AAB66140.3|  310|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    29   4.7  
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      29   4.7  
AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.    29   4.7  
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical...    29   4.7  
Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +1

Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQ-EV 459
           E    +RP V +  P PP  Q   + N  +H +   +V+  K+ ++  E ALR+  + + 
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRRKLEAQF 429

Query: 460 SDGIGKWYARTEQINEPRPACNISKKISALKY 555
            D I       E +  P  +  + ++I    Y
Sbjct: 430 PDHIITLIPHIETVRNPDGSNVVRQRIKWTAY 461


>AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +1

Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQ-EV 459
           E    +RP V +  P PP  Q   + N  +H +   +V+  K+ ++  E ALR+  + + 
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRRKLEAQF 429

Query: 460 SDGIGKWYARTEQINEPRPACNISKKISALKY 555
            D I       E +  P  +  + ++I    Y
Sbjct: 430 PDHIITLIPHIETVRNPDGSNVVRQRIKWTAY 461


>AF016677-8|AAB66140.3|  310|Caenorhabditis elegans Hypothetical
           protein ZK1240.1 protein.
          Length = 310

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/56 (25%), Positives = 32/56 (57%)
 Frame = +2

Query: 44  ARRTRTSIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDI 211
           A + RT + DK+ ++ED+ + + +N+    E +D A     +D  +  +KK+++ +
Sbjct: 139 ALKLRTLLKDKLLKSEDQIVQIDKNI----EEVDSAQQTNQVDGKVFQDKKDLISV 190


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = +1

Query: 328 GPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINE 507
           GPP HQ+H  Q  +H+  A    SS  N        + Q  Q+   GI  +    +Q  +
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN-------VMYQ--QQEDTGIDAFAQFGQQSQQ 183

Query: 508 PRPACNISKKISALK 552
             P+  +S++I+A K
Sbjct: 184 YHPSPELSEQINASK 198


>AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical
           protein F13C5.2 protein.
          Length = 374

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +1

Query: 250 EDDLENVEVPDENEEIKRPLVD---LRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIN 420
           EDD E V+  ++ EE+K    +      P  P  +E E    E  E  E+  S  ++ ++
Sbjct: 243 EDDEEEVDEKEKEEEVKEDNAEEKPAEEPEQPDEKEEEDHEDEREEQEEEDSSDEEDGLD 302

Query: 421 TAEI 432
             ++
Sbjct: 303 DDDV 306


>Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical
           protein C02C6.1b protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 68  PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
           P+K    ED+    +E+ S + +L  Q  TI++ +D+ +R   K + D+  K ++  I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 68  PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
           P+K    ED+    +E+ S + +L  Q  TI++ +D+ +R   K + D+  K ++  I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 68  PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
           P+K    ED+    +E+ S + +L  Q  TI++ +D+ +R   K + D+  K ++  I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683


>AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 68  PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
           P+K    ED+    +E+ S + +L  Q  TI++ +D+ +R   K + D+  K ++  I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683


>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
            protein W03F11.4 protein.
          Length = 1406

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +1

Query: 337  QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINEPRP 516
            + +E + +NP + E  +K  +   ND+N  E   RQ FQE    I K  A+  + +E RP
Sbjct: 1323 KRKEFDEKNPGYREKQQKDKALWDNDVN-KEYEERQKFQEQLKKIQKENAKKPK-SEDRP 1380

Query: 517  ACNISKKISALK 552
                 ++ +A K
Sbjct: 1381 RRGDKRRGAAKK 1392


>Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical
           protein F09C8.2 protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 369
           EN+  +   V+ + P P QHQ+ + Q PE
Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
            T28C6.9 protein.
          Length = 1861

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 71   DKVPEAEDKPLNVVENLSS-EQELIDQANTIKDIDNSLRANKKE 199
            +++   ED+ L + E L   E+EL+D+ N  K++D  +    +E
Sbjct: 1253 NRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEE 1296


>Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical
           protein C38D4.5 protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 21/96 (21%), Positives = 39/96 (40%)
 Frame = +1

Query: 187 EQKXXXXXXXXXXXXXNQTVVEDDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNP 366
           EQK                ++ED+    EV D+ +E   P++DL++   P        + 
Sbjct: 163 EQKENKMRESLADDDRKSQLIEDEEVFDEVCDDVDEQSSPVIDLQSRPLPIPFSDSFTDD 222

Query: 367 EHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIG 474
           E  +D + I  S+ +D +  E  +    ++ S   G
Sbjct: 223 EDEDDVKPIEGSIASDSDFDEEPVPTSSRKASTASG 258


>AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical
           protein Y105C5A.1 protein.
          Length = 767

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 600 IAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSEG 716
           +  PS + T+NK     I+   + L +NFN+G+  +S G
Sbjct: 215 VVLPSRKSTRNKKDMNQIKED-EELVSNFNNGIGVISRG 252


>Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +2

Query: 74  KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 241
           K+ E ED+ +  V+N    +++ ++    K++ N  ++N   KK     P+   VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396


>Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +2

Query: 74  KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 241
           K+ E ED+ +  V+N    +++ ++    K++ N  ++N   KK     P+   VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,682
Number of Sequences: 27780
Number of extensions: 296997
Number of successful extensions: 1377
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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