Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20978
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 31 1.2
AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical ... 30 2.0
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 29 2.7
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.7
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 4.7
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQ-EV 459
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+ + +
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRRKLEAQF 429
Query: 460 SDGIGKWYARTEQINEPRPACNISKKISALKY 555
D I E + P + + ++I Y
Sbjct: 430 PDHIITLIPHIETVRNPDGSNVVRQRIKWTAY 461
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQ-EV 459
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+ + +
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRRKLEAQF 429
Query: 460 SDGIGKWYARTEQINEPRPACNISKKISALKY 555
D I E + P + + ++I Y
Sbjct: 430 PDHIITLIPHIETVRNPDGSNVVRQRIKWTAY 461
>AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical
protein ZK1240.1 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +2
Query: 44 ARRTRTSIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDI 211
A + RT + DK+ ++ED+ + + +N+ E +D A +D + +KK+++ +
Sbjct: 139 ALKLRTLLKDKLLKSEDQIVQIDKNI----EEVDSAQQTNQVDGKVFQDKKDLISV 190
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 328 GPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINE 507
GPP HQ+H Q +H+ A SS N + Q Q+ GI + +Q +
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN-------VMYQ--QQEDTGIDAFAQFGQQSQQ 183
Query: 508 PRPACNISKKISALK 552
P+ +S++I+A K
Sbjct: 184 YHPSPELSEQINASK 198
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 250 EDDLENVEVPDENEEIKRPLVD---LRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIN 420
EDD E V+ ++ EE+K + P P +E E E E E+ S ++ ++
Sbjct: 243 EDDEEEVDEKEKEEEVKEDNAEEKPAEEPEQPDEKEEEDHEDEREEQEEEDSSDEEDGLD 302
Query: 421 TAEI 432
++
Sbjct: 303 DDDV 306
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +1
Query: 337 QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINEPRP 516
+ +E + +NP + E +K + ND+N E RQ FQE I K A+ + +E RP
Sbjct: 1323 KRKEFDEKNPGYREKQQKDKALWDNDVN-KEYEERQKFQEQLKKIQKENAKKPK-SEDRP 1380
Query: 517 ACNISKKISALK 552
++ +A K
Sbjct: 1381 RRGDKRRGAAKK 1392
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 369
EN+ + V+ + P P QHQ+ + Q PE
Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 71 DKVPEAEDKPLNVVENLSS-EQELIDQANTIKDIDNSLRANKKE 199
+++ ED+ L + E L E+EL+D+ N K++D + +E
Sbjct: 1253 NRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEE 1296
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/96 (21%), Positives = 39/96 (40%)
Frame = +1
Query: 187 EQKXXXXXXXXXXXXXNQTVVEDDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNP 366
EQK ++ED+ EV D+ +E P++DL++ P +
Sbjct: 163 EQKENKMRESLADDDRKSQLIEDEEVFDEVCDDVDEQSSPVIDLQSRPLPIPFSDSFTDD 222
Query: 367 EHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIG 474
E +D + I S+ +D + E + ++ S G
Sbjct: 223 EDEDDVKPIEGSIASDSDFDEEPVPTSSRKASTASG 258
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 600 IAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSEG 716
+ PS + T+NK I+ + L +NFN+G+ +S G
Sbjct: 215 VVLPSRKSTRNKKDMNQIKED-EELVSNFNNGIGVISRG 252
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 74 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 241
K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 74 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 241
K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,682
Number of Sequences: 27780
Number of extensions: 296997
Number of successful extensions: 1377
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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