BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20978 (749 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 31 1.2 AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 31 1.2 AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical ... 30 2.0 Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.7 AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 29 2.7 Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.7 Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.7 L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.7 AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.7 AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 4.7 Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 28 6.2 Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 6.2 Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 28 6.2 AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 28 6.2 Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.1 Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.1 >Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical protein F22E12.1 protein. Length = 763 Score = 30.7 bits (66), Expect = 1.2 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = +1 Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQ-EV 459 E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+ + + Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRRKLEAQF 429 Query: 460 SDGIGKWYARTEQINEPRPACNISKKISALKY 555 D I E + P + + ++I Y Sbjct: 430 PDHIITLIPHIETVRNPDGSNVVRQRIKWTAY 461 >AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical protein F22E12.1 protein. Length = 763 Score = 30.7 bits (66), Expect = 1.2 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = +1 Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQ-EV 459 E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+ + + Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRRKLEAQF 429 Query: 460 SDGIGKWYARTEQINEPRPACNISKKISALKY 555 D I E + P + + ++I Y Sbjct: 430 PDHIITLIPHIETVRNPDGSNVVRQRIKWTAY 461 >AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical protein ZK1240.1 protein. Length = 310 Score = 29.9 bits (64), Expect = 2.0 Identities = 14/56 (25%), Positives = 32/56 (57%) Frame = +2 Query: 44 ARRTRTSIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDI 211 A + RT + DK+ ++ED+ + + +N+ E +D A +D + +KK+++ + Sbjct: 139 ALKLRTLLKDKLLKSEDQIVQIDKNI----EEVDSAQQTNQVDGKVFQDKKDLISV 190 >Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical protein E01G4.4 protein. Length = 534 Score = 29.5 bits (63), Expect = 2.7 Identities = 22/75 (29%), Positives = 35/75 (46%) Frame = +1 Query: 328 GPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINE 507 GPP HQ+H Q +H+ A SS N + Q Q+ GI + +Q + Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN-------VMYQ--QQEDTGIDAFAQFGQQSQQ 183 Query: 508 PRPACNISKKISALK 552 P+ +S++I+A K Sbjct: 184 YHPSPELSEQINASK 198 >AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical protein F13C5.2 protein. Length = 374 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +1 Query: 250 EDDLENVEVPDENEEIKRPLVD---LRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDIN 420 EDD E V+ ++ EE+K + P P +E E E E E+ S ++ ++ Sbjct: 243 EDDEEEVDEKEKEEEVKEDNAEEKPAEEPEQPDEKEEEDHEDEREEQEEEDSSDEEDGLD 302 Query: 421 TAEI 432 ++ Sbjct: 303 DDDV 306 >Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical protein C02C6.1b protein. Length = 838 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238 P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683 >Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein C02C6.1a protein. Length = 830 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238 P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683 >L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. Length = 830 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238 P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683 >AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. Length = 838 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 68 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 238 P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683 >AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical protein W03F11.4 protein. Length = 1406 Score = 28.7 bits (61), Expect = 4.7 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +1 Query: 337 QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINEPRP 516 + +E + +NP + E +K + ND+N E RQ FQE I K A+ + +E RP Sbjct: 1323 KRKEFDEKNPGYREKQQKDKALWDNDVN-KEYEERQKFQEQLKKIQKENAKKPK-SEDRP 1380 Query: 517 ACNISKKISALK 552 ++ +A K Sbjct: 1381 RRGDKRRGAAKK 1392 >Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical protein F09C8.2 protein. Length = 762 Score = 28.3 bits (60), Expect = 6.2 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 283 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 369 EN+ + V+ + P P QHQ+ + Q PE Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432 >Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein T28C6.9 protein. Length = 1861 Score = 28.3 bits (60), Expect = 6.2 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 71 DKVPEAEDKPLNVVENLSS-EQELIDQANTIKDIDNSLRANKKE 199 +++ ED+ L + E L E+EL+D+ N K++D + +E Sbjct: 1253 NRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEE 1296 >Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical protein C38D4.5 protein. Length = 837 Score = 28.3 bits (60), Expect = 6.2 Identities = 21/96 (21%), Positives = 39/96 (40%) Frame = +1 Query: 187 EQKXXXXXXXXXXXXXNQTVVEDDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNP 366 EQK ++ED+ EV D+ +E P++DL++ P + Sbjct: 163 EQKENKMRESLADDDRKSQLIEDEEVFDEVCDDVDEQSSPVIDLQSRPLPIPFSDSFTDD 222 Query: 367 EHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIG 474 E +D + I S+ +D + E + ++ S G Sbjct: 223 EDEDDVKPIEGSIASDSDFDEEPVPTSSRKASTASG 258 >AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical protein Y105C5A.1 protein. Length = 767 Score = 28.3 bits (60), Expect = 6.2 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 600 IAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSEG 716 + PS + T+NK I+ + L +NFN+G+ +S G Sbjct: 215 VVLPSRKSTRNKKDMNQIKED-EELVSNFNNGIGVISRG 252 >Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical protein F18C12.3 protein. Length = 545 Score = 27.9 bits (59), Expect = 8.1 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +2 Query: 74 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 241 K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396 >Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical protein F18C12.3 protein. Length = 545 Score = 27.9 bits (59), Expect = 8.1 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +2 Query: 74 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 241 K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,634,682 Number of Sequences: 27780 Number of extensions: 296997 Number of successful extensions: 1377 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1221 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1376 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1777507862 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -