Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20977
         (708 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000515D50 Cluster: PREDICTED: hypothetical protein;...    39   0.14 
UniRef50_Q0IEA1 Cluster: Putative uncharacterized protein; n=1; ...    37   0.56 
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_UPI00015B5DFF Cluster: PREDICTED: hypothetical protein;...    33   6.9  

>UniRef50_UPI0000515D50 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 106

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +1

Query: 388 QHDDLINYIYDSWNKVTRDLE 450
           QH DLI YIYDSWN V+R+L+
Sbjct: 29  QHFDLIKYIYDSWNTVSRELD 49


>UniRef50_Q0IEA1 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 135

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +1

Query: 385 TQHDDLINYIYDSWNKVTRDLERGDDEAKYYHDVMTPR 498
           +QHD+LI YI+++WN +T+D  +  +   ++  V  PR
Sbjct: 71  SQHDELIRYIHEAWNTITQD--KSQNPPVFFKSVPEPR 106


>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 3702

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 514  LKWQGDEVSSRHGSTSPHHHHVLDHGSPYSMNH 416
            ++  G +VS R G   PHHHH L H   +S  H
Sbjct: 2732 MRIDGIDVSGRLGRGGPHHHHHLHHHHHHSHTH 2764


>UniRef50_UPI00015B5DFF Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 108

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 11/22 (50%), Positives = 19/22 (86%)
 Frame = +1

Query: 385 TQHDDLINYIYDSWNKVTRDLE 450
           +QH DLI YI++SW+ V+++L+
Sbjct: 30  SQHFDLIKYIFESWSSVSKELD 51


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,794,500
Number of Sequences: 1657284
Number of extensions: 9075634
Number of successful extensions: 24601
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24351
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)