Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20977
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.76 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    26   1.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.3  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   1.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   1.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 475 STSPHHHHVLDHGSPYSM 422
           S SPHHH    HG+P ++
Sbjct: 716 SPSPHHHLTSPHGAPLAL 733


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 505 QGDEVSSRHGSTSPHHHHVLDHGSPYSMNHKCN**DHHAEY 383
           Q  EV  R  S+     +VLD    +  NH+CN   H+  Y
Sbjct: 350 QLQEVEMRERSSKSLLANVLDIDDDFRCNHRCNTLPHNPTY 390


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -3

Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHH-HHVLDHGSPY 428
           HH SR          VSS  G+  PHH H+ L H   Y
Sbjct: 476 HHLSRHASSILPSSLVSSPDGTDLPHHTHYQLHHQMSY 513


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -3

Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHH-HHVLDHGSPY 428
           HH SR          VSS  G+  PHH H+ L H   Y
Sbjct: 452 HHLSRHASSILPSSLVSSPDGTDLPHHTHYQLHHQMSY 489


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -3

Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHHHHVLDHGSP 431
           HH S   G    G  ++  H +  PHHHH   H  P
Sbjct: 479 HHVSPGMGSTVNGASLTHSHHA-HPHHHHHHHHHHP 513


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 385  TQHDDLINYIYDSWNKVTRDLERGD 459
            T  + L+NY+   W + ++ L+ GD
Sbjct: 1384 TPQEPLMNYVISCWVRTSKALKLGD 1408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,424
Number of Sequences: 2352
Number of extensions: 10337
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)