Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20977
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011377-1|AAR96169.1| 958|Drosophila melanogaster LP10202p pro... 29 4.7
AE014297-1897|AAS65152.1| 959|Drosophila melanogaster CG3563-PB... 29 4.7
AE014297-1893|AAF55097.2| 1153|Drosophila melanogaster CG3563-PA... 29 4.7
AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p pro... 25 5.2
AF097636-1|AAF63187.1| 1368|Drosophila melanogaster bicoid-inter... 25 5.2
AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,... 25 5.2
AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,... 25 5.2
BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p pro... 25 5.5
AF273707-1|AAL35409.1| 879|Drosophila melanogaster PFTAIRE-inte... 29 6.2
AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB... 29 6.2
AE014297-816|AAO41518.1| 879|Drosophila melanogaster CG33719-PA... 29 6.2
AE014134-2919|AAF53661.1| 446|Drosophila melanogaster CG15157-P... 29 6.2
>BT011377-1|AAR96169.1| 958|Drosophila melanogaster LP10202p
protein.
Length = 958
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -3
Query: 478 GSTSPHH--HHVLDHGSPYSMNH 416
G+T PHH HH L H +PYS ++
Sbjct: 36 GATYPHHLHHHHLSHHTPYSNSY 58
>AE014297-1897|AAS65152.1| 959|Drosophila melanogaster CG3563-PB,
isoform B protein.
Length = 959
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -3
Query: 478 GSTSPHH--HHVLDHGSPYSMNH 416
G+T PHH HH L H +PYS ++
Sbjct: 36 GATYPHHLHHHHLSHHTPYSNSY 58
>AE014297-1893|AAF55097.2| 1153|Drosophila melanogaster CG3563-PA,
isoform A protein.
Length = 1153
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -3
Query: 478 GSTSPHH--HHVLDHGSPYSMNH 416
G+T PHH HH L H +PYS ++
Sbjct: 230 GATYPHHLHHHHLSHHTPYSNSY 252
>AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p
protein.
Length = 1367
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 463 HHHHVLDHGSPYSMNHKC 410
HHHHVL G+ + NH C
Sbjct: 208 HHHHVLCAGN--NANHTC 223
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 8/29 (27%), Positives = 11/29 (37%)
Frame = -3
Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHHHH 452
HH + G + H + HHHH
Sbjct: 150 HHGNAGTAHHGGGGGAGAHHAAAGGHHHH 178
>AF097636-1|AAF63187.1| 1368|Drosophila melanogaster
bicoid-interacting protein BIN3 protein.
Length = 1368
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 463 HHHHVLDHGSPYSMNHKC 410
HHHHVL G+ + NH C
Sbjct: 208 HHHHVLCAGN--NANHTC 223
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 8/29 (27%), Positives = 11/29 (37%)
Frame = -3
Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHHHH 452
HH + G + H + HHHH
Sbjct: 150 HHGNAGTAHHGGGGGAGAHHAAAGGHHHH 178
>AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,
isoform B protein.
Length = 1367
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 463 HHHHVLDHGSPYSMNHKC 410
HHHHVL G+ + NH C
Sbjct: 208 HHHHVLCAGN--NANHTC 223
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 8/29 (27%), Positives = 11/29 (37%)
Frame = -3
Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHHHH 452
HH + G + H + HHHH
Sbjct: 150 HHGNAGTAHHGGGGGAGAHHAAAGGHHHH 178
>AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,
isoform A protein.
Length = 1367
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 463 HHHHVLDHGSPYSMNHKC 410
HHHHVL G+ + NH C
Sbjct: 208 HHHHVLCAGN--NANHTC 223
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 8/29 (27%), Positives = 11/29 (37%)
Frame = -3
Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHHHH 452
HH + G + H + HHHH
Sbjct: 150 HHGNAGTAHHGGGGGAGAHHAAAGGHHHH 178
>BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p
protein.
Length = 824
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 463 HHHHVLDHGSPYSMNHKC 410
HHHHVL G+ + NH C
Sbjct: 208 HHHHVLCAGN--NANHTC 223
Score = 23.0 bits (47), Expect(2) = 5.5
Identities = 8/29 (27%), Positives = 11/29 (37%)
Frame = -3
Query: 538 HHSSRLNGLKWQGDEVSSRHGSTSPHHHH 452
HH + G + H + HHHH
Sbjct: 150 HHGNAGTAHHGGGGGAGAHHAAAGGHHHH 178
>AF273707-1|AAL35409.1| 879|Drosophila melanogaster
PFTAIRE-interacting factor 1A protein.
Length = 879
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 194 GTRSLPHMGKRHNSSHSHSH 253
G ++ KRHNS+HSHSH
Sbjct: 263 GDQNRTETPKRHNSTHSHSH 282
>AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB,
isoform B protein.
Length = 1308
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 194 GTRSLPHMGKRHNSSHSHSH 253
G ++ KRHNS+HSHSH
Sbjct: 263 GDQNRTETPKRHNSTHSHSH 282
>AE014297-816|AAO41518.1| 879|Drosophila melanogaster CG33719-PA,
isoform A protein.
Length = 879
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 194 GTRSLPHMGKRHNSSHSHSH 253
G ++ KRHNS+HSHSH
Sbjct: 263 GDQNRTETPKRHNSTHSHSH 282
>AE014134-2919|AAF53661.1| 446|Drosophila melanogaster CG15157-PA
protein.
Length = 446
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 502 GDEVSSRHGSTSPHHHHVLDHGSPYSMNH 416
G + R TS HH H L H P++ +H
Sbjct: 351 GHGLKERESQTSLHHPHTLPHPHPHTHSH 379
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,014,129
Number of Sequences: 53049
Number of extensions: 449286
Number of successful extensions: 2972
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2910
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -