Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20976
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 27 0.24
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.9
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 9.0
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 9.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.0
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 9.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.0
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 9.0
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 9.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 26.6 bits (56), Expect = 0.24
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -1
Query: 469 ESEEQQERHHKTEQTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTS 299
+ ++QQ+R + ++ LR E + V E GG G+ D S ++ T+
Sbjct: 165 QQQQQQQRQQQRQEERRLRPDEIKVEVGEDEFANGGAARDESKAGSTDASTPATVTT 221
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/28 (32%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 490 FLKVNSLESEEQQERHHK-TEQTHSLRQ 410
F++ +SL ++QQ++HH+ + H+ Q
Sbjct: 91 FMQQHSLYLQQQQQQHHQDSSSEHASNQ 118
Score = 22.6 bits (46), Expect = 3.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 93 WRQTAFCFYKVRRATIYDSIR 31
W Q FC+++ AT +++R
Sbjct: 533 WFQNTFCYFRRNAATWKNAVR 553
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 199 HSSLQCGPSRPHRSLRTLTCCQIH 270
H + GP+ R T CC+ H
Sbjct: 39 HGNKSSGPNELGRFKHTDACCRTH 62
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 199 HSSLQCGPSRPHRSLRTLTCCQIH 270
H + GP+ R T CC+ H
Sbjct: 44 HGNKSSGPNELGRFKHTDACCRTH 67
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.4 bits (43), Expect = 9.0
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 472 LESEEQQERHHKTEQTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTS-SGTS 299
++S E++ER H + R+ EQL + G+ G+ G S+++ +G+S
Sbjct: 97 IKSLEERERKHAVHKEQLSREQRFLRRRLEQLTNQTGLHGLHGLHGLHGLSSSAPTGSS 155
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 518 VILCRAPHII 527
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 40 VVNCRAPHLI 69
V+ CRAPH+I
Sbjct: 518 VILCRAPHII 527
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +1
Query: 157 QQYP-PIHRWY 186
Q +P P+HRWY
Sbjct: 237 QGFPVPVHRWY 247
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 9.0
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = +1
Query: 154 LQQYPPIHRWYLLSLHSSLQCG----PSRPHRSLRTLTCCQIHWCWCSDSG 294
+QQ+ P+ L+S +Q G P + HRS T C H C G
Sbjct: 255 VQQHQPVT--VNRQLNSDVQPGHGSPPVKQHRSSSASTTCSGHTVRCFTGG 303
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 199 HSSLQCGPSRPHRSLRTLTCCQIH 270
H + GP+ R T CC+ H
Sbjct: 44 HGNKSSGPNELGRFKHTDACCRTH 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,348
Number of Sequences: 438
Number of extensions: 4659
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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