Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20975
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 177 9e-45
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 177 9e-45
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 177 9e-45
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 177 9e-45
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 168 4e-42
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 168 4e-42
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 167 9e-42
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 167 9e-42
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 167 9e-42
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 165 2e-41
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 163 1e-40
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 163 1e-40
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 161 4e-40
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 158 4e-39
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 158 4e-39
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 107 6e-24
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 107 6e-24
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 107 8e-24
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 105 3e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 103 1e-22
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 103 1e-22
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 93 2e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 93 2e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 57 1e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 57 1e-08
Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical pr... 30 2.0
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 29 2.6
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 29 2.6
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 28 6.0
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 28 6.0
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 6.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 7.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 7.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 7.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 7.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 7.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 7.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 7.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 7.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 177 bits (430), Expect = 9e-45
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 148
Score = 156 bits (379), Expect = 1e-38
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMV
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 204
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLDI
Sbjct: 205 DNEAIYDICRRNLDI 219
Score = 123 bits (296), Expect = 2e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 259 TYP 267
P
Sbjct: 61 HVP 63
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 177 bits (430), Expect = 9e-45
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 147
Score = 156 bits (379), Expect = 1e-38
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMV
Sbjct: 144 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 203
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLDI
Sbjct: 204 DNEAIYDICRRNLDI 218
Score = 121 bits (291), Expect = 6e-28
Identities = 50/62 (80%), Positives = 57/62 (91%)
Frame = +1
Query: 82 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 261
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 262 YP 267
P
Sbjct: 61 VP 62
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 177 bits (430), Expect = 9e-45
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 148
Score = 156 bits (379), Expect = 1e-38
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMV
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 204
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLDI
Sbjct: 205 DNEAIYDICRRNLDI 219
Score = 123 bits (296), Expect = 2e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 259 TYP 267
P
Sbjct: 61 HVP 63
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 177 bits (430), Expect = 9e-45
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGG G
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 148
Score = 156 bits (379), Expect = 1e-38
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMV
Sbjct: 145 TGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 204
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLDI
Sbjct: 205 DNEAIYDICRRNLDI 219
Score = 123 bits (296), Expect = 2e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 259 TYP 267
P
Sbjct: 61 HVP 63
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 168 bits (408), Expect = 4e-42
Identities = 72/100 (72%), Positives = 86/100 (86%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 158 bits (384), Expect = 3e-39
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLD+
Sbjct: 203 DNEAIYDICRRNLDV 217
Score = 103 bits (248), Expect = 1e-22
Identities = 47/63 (74%), Positives = 51/63 (80%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 168 bits (408), Expect = 4e-42
Identities = 72/100 (72%), Positives = 86/100 (86%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 158 bits (384), Expect = 3e-39
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLD+
Sbjct: 203 DNEAIYDICRRNLDV 217
Score = 103 bits (248), Expect = 1e-22
Identities = 47/63 (74%), Positives = 51/63 (80%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 167 bits (405), Expect = 9e-42
Identities = 71/100 (71%), Positives = 86/100 (86%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 156 bits (378), Expect = 2e-38
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNL +
Sbjct: 203 DNEAIYDICRRNLSV 217
Score = 102 bits (245), Expect = 2e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 167 bits (405), Expect = 9e-42
Identities = 72/100 (72%), Positives = 85/100 (85%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
+ F S KHVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
TIGKE++D+V+DR+R+L ++C LQGFLIFHSFGGG G
Sbjct: 109 TIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSG 148
Score = 135 bits (326), Expect = 4e-32
Identities = 58/75 (77%), Positives = 72/75 (96%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSL+MERLS+DYGKK+KLEF+IYPAPQ+ST++VEPYNS+LTTHTTLEHSDC+F++
Sbjct: 145 TGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIM 204
Query: 689 DNEAIYDICRRNLDI 733
DNEAIY+I + NL +
Sbjct: 205 DNEAIYEITKVNLGV 219
Score = 104 bits (249), Expect = 8e-23
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 259 TYP 267
P
Sbjct: 61 HVP 63
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 167 bits (405), Expect = 9e-42
Identities = 71/100 (71%), Positives = 86/100 (86%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGG G
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 154 bits (373), Expect = 7e-38
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQV TAVVEPYNSILTTHTTLEHSDCAFMV
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNL +
Sbjct: 203 DNEAIYDICRRNLSV 217
Score = 102 bits (245), Expect = 2e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 165 bits (402), Expect = 2e-41
Identities = 70/100 (70%), Positives = 83/100 (83%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
TIGKEI+D+V+DR+R+L + C GLQGFL+FHSFGGG G
Sbjct: 114 TIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSG 153
Score = 153 bits (370), Expect = 2e-37
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFT+LLMERLSVDYGKKSKLEF IYPAPQVST++VEPYNSILTTHTTLEHSDC+FMV
Sbjct: 150 TGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMV 209
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLD+
Sbjct: 210 DNEAIYDICRRNLDL 224
Score = 104 bits (250), Expect = 6e-23
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +1
Query: 76 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 255
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 256 STYP 267
P
Sbjct: 65 KHVP 68
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 163 bits (396), Expect = 1e-40
Identities = 69/100 (69%), Positives = 84/100 (84%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
T+GKE++D LDRIR+LAD C+GLQGF +FHSFGGG G
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 157 bits (381), Expect = 8e-39
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDIC+RNLD+
Sbjct: 203 DNEAIYDICKRNLDV 217
Score = 101 bits (242), Expect = 5e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 163 bits (396), Expect = 1e-40
Identities = 69/100 (69%), Positives = 84/100 (84%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
T+GKE++D LDRIR+LAD C+GLQGF +FHSFGGG G
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 157 bits (381), Expect = 8e-39
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTSLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV
Sbjct: 143 TGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDIC+RNLD+
Sbjct: 203 DNEAIYDICKRNLDV 217
Score = 101 bits (242), Expect = 5e-22
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 161 bits (392), Expect = 4e-40
Identities = 67/89 (75%), Positives = 80/89 (89%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D L
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116
Query: 435 DRIRKLADQCTGLQGFLIFHSFGGGPALG 521
DRIR+LA+ C GLQGF +FHSFGGG G
Sbjct: 117 DRIRRLANNCEGLQGFFVFHSFGGGTGSG 145
Score = 148 bits (359), Expect = 4e-36
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGFTS+LMERLS +YGKKSKLEF+IYPAPQ+ST+VVEPYNSILTTHTTLEHSDC+FMV
Sbjct: 142 TGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMV 201
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNL +
Sbjct: 202 DNEAIYDICRRNLRV 216
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/63 (66%), Positives = 44/63 (69%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 259 TYP 267
P
Sbjct: 58 HVP 60
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 159 bits (386), Expect = 2e-39
Identities = 68/99 (68%), Positives = 80/99 (80%)
Frame = +3
Query: 225 QHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 404
Q F + KHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 405 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALG 521
IGKE++D+VLDRIRK + C GLQGFL+FHSFGGG G
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSG 151
Score = 138 bits (335), Expect = 3e-33
Identities = 62/75 (82%), Positives = 72/75 (96%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGF+SLLMERLSV++GKKSKLEF++YPAPQVST+VVEPYNSILTTHTTLE SDC+FMV
Sbjct: 148 TGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMV 207
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYD+CR+ L +
Sbjct: 208 DNEAIYDLCRQKLHV 222
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +1
Query: 82 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 261
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 262 YP 267
P
Sbjct: 65 VP 66
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 158 bits (383), Expect = 4e-39
Identities = 69/99 (69%), Positives = 82/99 (82%)
Frame = +3
Query: 231 FLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 410
F KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG
Sbjct: 58 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 117
Query: 411 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSL 527
+E++D+V+DR+++LA+ C GLQGF+IFHSFGGG G L
Sbjct: 118 REMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFL 156
Score = 145 bits (351), Expect = 3e-35
Identities = 66/75 (88%), Positives = 70/75 (93%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGF SLLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC FMV
Sbjct: 151 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMV 210
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLD+
Sbjct: 211 DNEAIYDICRRNLDL 225
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +1
Query: 82 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGST 261
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 262 YP 267
P
Sbjct: 68 VP 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 158 bits (383), Expect = 4e-39
Identities = 69/99 (69%), Positives = 82/99 (82%)
Frame = +3
Query: 231 FLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 410
F KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG
Sbjct: 30 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 89
Query: 411 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGSL 527
+E++D+V+DR+++LA+ C GLQGF+IFHSFGGG G L
Sbjct: 90 REMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFL 128
Score = 145 bits (351), Expect = 3e-35
Identities = 66/75 (88%), Positives = 70/75 (93%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSGF SLLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC FMV
Sbjct: 123 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMV 182
Query: 689 DNEAIYDICRRNLDI 733
DNEAIYDICRRNLD+
Sbjct: 183 DNEAIYDICRRNLDL 197
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 145 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
++CLEHGIQPDG D T ++ NTFF+ET G P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 107 bits (258), Expect = 6e-24
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGGGPALG 521
D IRK A+ C LQGF + HS GGG G
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 75.4 bits (177), Expect = 4e-14
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG +LL+ ++ ++ + F++ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEA+YDIC R L +
Sbjct: 203 DNEALYDICYRTLKL 217
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 107 bits (258), Expect = 6e-24
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGGGPALG 521
D IRK A+ C LQGF + HS GGG G
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG +LL+ ++ +Y + F++ P+P+VS VVEPYN+ L+ H +E++D + +
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEA+YDIC R L +
Sbjct: 203 DNEALYDICYRTLKL 217
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 107 bits (257), Expect = 8e-24
Identities = 49/89 (55%), Positives = 62/89 (69%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGGGPALG 521
D +RK A+ C LQGF + HS GGG G
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 77.8 bits (183), Expect = 7e-15
Identities = 33/75 (44%), Positives = 51/75 (68%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG +LL+ ++ +Y + F++ P+P+VS VVEPYN+ L+ H +E++D F +
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEA+YDIC R L +
Sbjct: 203 DNEALYDICFRTLKL 217
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E G
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 105 bits (252), Expect = 3e-23
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGGGPALG 521
D +RK A+ C LQGF + HS GGG G
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGGTGSG 146
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG +LL+ ++ +Y + + F++ P+P+VS VVEPYN+ L+ H +E++D F +
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEA+YDIC R L +
Sbjct: 203 DNEALYDICFRTLKL 217
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E G
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 103 bits (248), Expect = 1e-22
Identities = 48/89 (53%), Positives = 61/89 (68%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGGGPALG 521
D +RK A+ LQGF + HS GGG G
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSG 146
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/75 (44%), Positives = 51/75 (68%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG +LL+ ++ +Y + F++ P+P+VS VVEPYN+ L+ H +E++D F +
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEA+YDIC R L +
Sbjct: 203 DNEALYDICFRTLKL 217
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 103 bits (248), Expect = 1e-22
Identities = 48/89 (53%), Positives = 61/89 (68%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGGGPALG 521
D +RK A+ LQGF + HS GGG G
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSG 146
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/75 (44%), Positives = 51/75 (68%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG +LL+ ++ +Y + F++ P+P+VS VVEPYN+ L+ H +E++D F +
Sbjct: 143 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEA+YDIC R L +
Sbjct: 203 DNEALYDICFRTLKL 217
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGS 258
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 259 TYP 267
P
Sbjct: 59 YVP 61
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGG--GPALGSL 527
IR+ A+ L+GF + HS GG G LGSL
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSL 150
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG SLL+ +L +Y K+ +I P+ +VS VVEPYN+IL+ +++ D F +
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAI+DIC+ NL +
Sbjct: 203 DNEAIFDICQYNLKL 217
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 195
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 435 DRIRKLADQCTGLQGFLIFHSFGG--GPALGSL 527
IR+ A+ L+GF + HS GG G LGSL
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSL 150
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 688
TGSG SLL+ +L +Y K+ +I P+ +VS VVEPYN+IL+ +++ D F +
Sbjct: 143 TGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCI 202
Query: 689 DNEAIYDICRRNLDI 733
DNEAI+DIC+ NL +
Sbjct: 203 DNEAIFDICQYNLKL 217
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1
Query: 79 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 195
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +3
Query: 231 FLQRDRSWKHVPRAVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHY 401
F Q D +VPRAV VDLEP V++ + ++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGS 524
G+E+ + ++D I + A+ L G L HS GG G+
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYNSILTTHTTLEHSDCAFM 685
TGSG SLL+ERL + KK ++++ ST VV PYN +L+ +E+ D +
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVV 206
Query: 686 VDNEAIY 706
+DN A++
Sbjct: 207 LDNAALH 213
Score = 34.7 bits (76), Expect = 0.069
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 91 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 183
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +3
Query: 231 FLQRDRSWKHVPRAVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHY 401
F Q D +VPRAV VDLEP V++ + ++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGPALGS 524
G+E+ + ++D I + A+ L G L HS GG G+
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 509 TGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYNSILTTHTTLEHSDCAFM 685
TGSG SLL+ERL + KK ++++ ST VV PYN +L+ +E+ D +
Sbjct: 147 TGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVV 206
Query: 686 VDNEAIY 706
+DN A++
Sbjct: 207 LDNAALH 213
Score = 34.7 bits (76), Expect = 0.069
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 91 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 183
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical
protein F11A5.8 protein.
Length = 659
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 488 LPLLRWRTGSGFTSL-LMERLSVDYGKKSK 574
+PL W+ G+GF +L L E ++VD KKSK
Sbjct: 195 MPLRLWQFGAGFVALFLREVITVDSVKKSK 224
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = -2
Query: 643 EDRVVGLDDGSGNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGPPPKEWKIRNPCRPV 464
E RV + + + R +D EL+ R AV +GE + + EP+ PKE K + P +
Sbjct: 826 EARVEEIPEKATKSFRELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKK 883
Query: 463 HWSASLRILSKTK 425
S+ R++ K K
Sbjct: 884 EMSSRDRLMKKLK 896
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = -2
Query: 643 EDRVVGLDDGSGNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGPPPKEWKIRNPCRPV 464
E RV + + + R +D EL+ R AV +GE + + EP+ PKE K + P +
Sbjct: 839 EARVEEIPEKATKSFRELDNELE-RCEAVHSGEKIKK-VKEPKPPKQPKEKKEKPPPKKK 896
Query: 463 HWSASLRILSKTK 425
S+ R++ K K
Sbjct: 897 EMSSRDRLMKKLK 909
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 249 SWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 356
SW H P+ ++ L + + +G++R L E+LI
Sbjct: 310 SWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELI 345
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 249 SWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 356
SW H P+ ++ L + + +G++R L E+LI
Sbjct: 310 SWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELI 345
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 368 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 273
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 297 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 440
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,608,757
Number of Sequences: 27780
Number of extensions: 402164
Number of successful extensions: 1174
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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