Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20974
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035698-1|AAH35698.1|  622|Homo sapiens C2orf44 protein protein.      30   8.8  
AK025598-1|BAB15186.1|  721|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AF218013-1|AAG17255.1|  234|Homo sapiens unknown protein.              30   8.8  
AC104665-1|AAY24115.1|  721|Homo sapiens unknown protein.              30   8.8  

>BC035698-1|AAH35698.1|  622|Homo sapiens C2orf44 protein protein.
          Length = 622

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 557 SLPNPAYFPDHTSSLEPP 610
           SLP  +  PDHTS+LEPP
Sbjct: 523 SLPRHSSTPDHTSTLEPP 540


>AK025598-1|BAB15186.1|  721|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21945 fis, clone HEP04702. ).
          Length = 721

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 557 SLPNPAYFPDHTSSLEPP 610
           SLP  +  PDHTS+LEPP
Sbjct: 523 SLPRHSSTPDHTSTLEPP 540


>AF218013-1|AAG17255.1|  234|Homo sapiens unknown protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 557 SLPNPAYFPDHTSSLEPP 610
           SLP  +  PDHTS+LEPP
Sbjct: 36  SLPRHSSTPDHTSTLEPP 53


>AC104665-1|AAY24115.1|  721|Homo sapiens unknown protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 557 SLPNPAYFPDHTSSLEPP 610
           SLP  +  PDHTS+LEPP
Sbjct: 523 SLPRHSSTPDHTSTLEPP 540


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,573,801
Number of Sequences: 237096
Number of extensions: 1887634
Number of successful extensions: 4176
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4176
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)