Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20974
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical ... 37 0.012
Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 32 0.33
U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosy... 31 0.58
AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 31 0.58
AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical ... 30 1.8
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 29 2.3
U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 29 2.3
Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical p... 29 3.1
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 3.1
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 28 5.4
U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone... 28 5.4
U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone... 28 5.4
U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone... 28 5.4
U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone... 28 5.4
U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone... 28 5.4
AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear recep... 28 5.4
AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear recep... 28 5.4
Z70682-7|CAA94585.2| 531|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 28 7.1
>AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical
protein Y37E11AR.5 protein.
Length = 527
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 70 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLKI 228
+L +L S YK+L P G SHM +L+EA HDVT+L + I
Sbjct: 7 LLLFVLPAASCYKILVSVPKFGFSHMQTMGKLADILVEAGHDVTFLMPVDVPI 59
>Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical
protein C17G1.3a protein.
Length = 530
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 55 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVT 201
+L A++L ++ S YK+L G SH+ V L++A HDVT
Sbjct: 3 LLSALLLQILFNVSSPYKILVYSNLFGHSHIKFVGSVVDTLVDAGHDVT 51
>U40959-5|AAA81769.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein46 protein.
Length = 531
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 67 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207
++L + +YK+L P KSH+I L A HDVT L
Sbjct: 6 VLLATFVNAAFSYKILVFSPATSKSHLISNGRLADELARAGHDVTVL 52
>AF026215-2|AAB71324.2| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein36 protein.
Length = 533
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 67 IILCLILVTCS-AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLKIDHPKL 243
++ CL CS +Y L P G SH L A H+VT+ T ++ K
Sbjct: 10 LLFCLFFALCSDSYNFLVFCPLFGHSHTTFFAKIADTLTYAGHNVTFFTPTIVR----KF 65
Query: 244 RQIEYLQ 264
+I+Y++
Sbjct: 66 SKIQYVK 72
>AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical
protein F10D2.8 protein.
Length = 124
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +1
Query: 67 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLKIDHPKLR 246
+IL LI T S Y L P G SH L +A H+VT+ T P ++ K R
Sbjct: 6 VILSLIYSTYS-YNFLVFCPLFGHSHTKFFATIADALTDAGHNVTFFT--PTIVE--KYR 60
Query: 247 QIEYLQPKRVLISM 288
+ Y + + ++ M
Sbjct: 61 NVSYTKLTKDVVHM 74
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 100 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207
AYK+L P KSH+I L +A H+VT L
Sbjct: 21 AYKILVFSPATSKSHLISNGRIADELAKAGHNVTLL 56
>U88311-5|AAB42343.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein25 protein.
Length = 531
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +1
Query: 52 IMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207
++++++ + L ++ +A+ +L P G SH L EA H+VT++
Sbjct: 1 MIIQSVFILLSVINVNAFNILVYSPSFGGSHTNFMARLADTLTEAGHNVTFV 52
>Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical
protein ZC455.5a protein.
Length = 535
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 67 IILCLILVT-CSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLK--IDHP 237
++L +LV+ +YK L + P G SHM L + H VTY ++ +DH
Sbjct: 7 VLLFSVLVSHVESYKFLVISPVYGYSHMKFMAIIANQLADEGHQVTYFQPFVIEAYLDHK 66
Query: 238 KL 243
L
Sbjct: 67 LL 68
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 55 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDV 198
M + L L L+ A K+L P +SH+I L++A HDV
Sbjct: 1 MYTFLFLLLSLLAVDAGKILVYSPSISRSHLISNGRIADALVDAGHDV 48
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 97 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHD-VTYLTSAPLKIDH 234
+A K+L P KSH++L Y LL A HD V ++ S +D+
Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKLLDN 70
>Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical
protein T07C5.1b protein.
Length = 190
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 97 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHD-VTYLTSAPLKIDH 234
+A K+L P KSH++L Y LL A HD V ++ S +D+
Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKLLDN 70
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 285 DGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVI 446
D LF I + D++D YIV+ + SL+ NV + +L TDQ + +
Sbjct: 95 DILFVVSTFIGVDADINDRYSWYIVIYTLVGSLVYGWNVLRFVLWTDQKLEGFL 148
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 46 KSIMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207
K I L + L LI T + +L + P G SHM L EA H+VT+L
Sbjct: 40 KMIRLHLLFLFLINQTLTI-NVLVLSPAFGGSHMNFMAHLADTLTEAGHNVTFL 92
>U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform b protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396
>U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform c protein.
Length = 440
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 400 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 436
>U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform d protein.
Length = 446
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 406 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 442
>U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform a protein.
Length = 448
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 408 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 444
>U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform e protein.
Length = 450
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 410 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 446
>AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear receptor
NHR-21b protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396
>AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear receptor
NHR-21a protein.
Length = 458
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 418 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 454
>Z70682-7|CAA94585.2| 531|Caenorhabditis elegans Hypothetical
protein F08G5.5 protein.
Length = 531
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 70 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVT-YLTSA-PLKIDHPKL 243
+L L T + ++L + F KSH + L + HDV+ Y SA LKI K+
Sbjct: 13 LLAHFLTTSNCSRILFLNMFNSKSHALTMMPLAERLFDDGHDVSMYTISANRLKIPSKKV 72
Query: 244 RQIEYL 261
+ +E L
Sbjct: 73 KILESL 78
>AC025716-15|AAO21409.1| 521|Caenorhabditis elegans
Udp-glucuronosyltransferase protein31 protein.
Length = 521
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 67 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTS 213
I ++LV +L P G SH L EA H+VT+L S
Sbjct: 5 IFFPILLVASEPLNILVYSPVFGGSHSKFMGNIADTLTEAGHNVTFLVS 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,585,360
Number of Sequences: 27780
Number of extensions: 302197
Number of successful extensions: 772
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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