BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20974 (683 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical ... 37 0.012 Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 32 0.33 U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosy... 31 0.58 AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 31 0.58 AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical ... 30 1.8 Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 29 2.3 U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 29 2.3 Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical p... 29 3.1 Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical pr... 29 3.1 AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 3.1 U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 28 5.4 U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone... 28 5.4 U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone... 28 5.4 U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone... 28 5.4 U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone... 28 5.4 U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone... 28 5.4 AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear recep... 28 5.4 AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear recep... 28 5.4 Z70682-7|CAA94585.2| 531|Caenorhabditis elegans Hypothetical pr... 28 7.1 AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 28 7.1 >AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical protein Y37E11AR.5 protein. Length = 527 Score = 37.1 bits (82), Expect = 0.012 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = +1 Query: 70 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLKI 228 +L +L S YK+L P G SHM +L+EA HDVT+L + I Sbjct: 7 LLLFVLPAASCYKILVSVPKFGFSHMQTMGKLADILVEAGHDVTFLMPVDVPI 59 >Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical protein C17G1.3a protein. Length = 530 Score = 32.3 bits (70), Expect = 0.33 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +1 Query: 55 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVT 201 +L A++L ++ S YK+L G SH+ V L++A HDVT Sbjct: 3 LLSALLLQILFNVSSPYKILVYSNLFGHSHIKFVGSVVDTLVDAGHDVT 51 >U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosyltransferase protein46 protein. Length = 531 Score = 31.5 bits (68), Expect = 0.58 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 67 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207 ++L + +YK+L P KSH+I L A HDVT L Sbjct: 6 VLLATFVNAAFSYKILVFSPATSKSHLISNGRLADELARAGHDVTVL 52 >AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucuronosyltransferase protein36 protein. Length = 533 Score = 31.5 bits (68), Expect = 0.58 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +1 Query: 67 IILCLILVTCS-AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLKIDHPKL 243 ++ CL CS +Y L P G SH L A H+VT+ T ++ K Sbjct: 10 LLFCLFFALCSDSYNFLVFCPLFGHSHTTFFAKIADTLTYAGHNVTFFTPTIVR----KF 65 Query: 244 RQIEYLQ 264 +I+Y++ Sbjct: 66 SKIQYVK 72 >AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical protein F10D2.8 protein. Length = 124 Score = 29.9 bits (64), Expect = 1.8 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = +1 Query: 67 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLKIDHPKLR 246 +IL LI T S Y L P G SH L +A H+VT+ T P ++ K R Sbjct: 6 VILSLIYSTYS-YNFLVFCPLFGHSHTKFFATIADALTDAGHNVTFFT--PTIVE--KYR 60 Query: 247 QIEYLQPKRVLISM 288 + Y + + ++ M Sbjct: 61 NVSYTKLTKDVVHM 74 >Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical protein R04B5.9 protein. Length = 536 Score = 29.5 bits (63), Expect = 2.3 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +1 Query: 100 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207 AYK+L P KSH+I L +A H+VT L Sbjct: 21 AYKILVFSPATSKSHLISNGRIADELAKAGHNVTLL 56 >U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosyltransferase protein25 protein. Length = 531 Score = 29.5 bits (63), Expect = 2.3 Identities = 13/52 (25%), Positives = 28/52 (53%) Frame = +1 Query: 52 IMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207 ++++++ + L ++ +A+ +L P G SH L EA H+VT++ Sbjct: 1 MIIQSVFILLSVINVNAFNILVYSPSFGGSHTNFMARLADTLTEAGHNVTFV 52 >Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical protein ZC455.5a protein. Length = 535 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = +1 Query: 67 IILCLILVT-CSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTSAPLK--IDHP 237 ++L +LV+ +YK L + P G SHM L + H VTY ++ +DH Sbjct: 7 VLLFSVLVSHVESYKFLVISPVYGYSHMKFMAIIANQLADEGHQVTYFQPFVIEAYLDHK 66 Query: 238 KL 243 L Sbjct: 67 LL 68 >Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical protein AC3.2 protein. Length = 525 Score = 29.1 bits (62), Expect = 3.1 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +1 Query: 55 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDV 198 M + L L L+ A K+L P +SH+I L++A HDV Sbjct: 1 MYTFLFLLLSLLAVDAGKILVYSPSISRSHLISNGRIADALVDAGHDV 48 >Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical protein T07C5.1c protein. Length = 523 Score = 29.1 bits (62), Expect = 3.1 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 97 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHD-VTYLTSAPLKIDH 234 +A K+L P KSH++L Y LL A HD V ++ S +D+ Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKLLDN 70 >Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical protein T07C5.1b protein. Length = 190 Score = 29.1 bits (62), Expect = 3.1 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 97 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHD-VTYLTSAPLKIDH 234 +A K+L P KSH++L Y LL A HD V ++ S +D+ Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKLLDN 70 >AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical protein Y75B8A.33 protein. Length = 341 Score = 29.1 bits (62), Expect = 3.1 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +3 Query: 285 DGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVI 446 D LF I + D++D YIV+ + SL+ NV + +L TDQ + + Sbjct: 95 DILFVVSTFIGVDADINDRYSWYIVIYTLVGSLVYGWNVLRFVLWTDQKLEGFL 148 >U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical protein C23G10.6 protein. Length = 540 Score = 28.3 bits (60), Expect = 5.4 Identities = 20/54 (37%), Positives = 26/54 (48%) Frame = +1 Query: 46 KSIMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 207 K I L + L LI T + +L + P G SHM L EA H+VT+L Sbjct: 40 KMIRLHLLFLFLINQTLTI-NVLVLSPAFGGSHMNFMAHLADTLTEAGHNVTFL 92 >U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone receptor familyprotein 21, isoform b protein. Length = 400 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392 F + N K L + ++LSD H V Q +TE+ +H Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396 >U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone receptor familyprotein 21, isoform c protein. Length = 440 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392 F + N K L + ++LSD H V Q +TE+ +H Sbjct: 400 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 436 >U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone receptor familyprotein 21, isoform d protein. Length = 446 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392 F + N K L + ++LSD H V Q +TE+ +H Sbjct: 406 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 442 >U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone receptor familyprotein 21, isoform a protein. Length = 448 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392 F + N K L + ++LSD H V Q +TE+ +H Sbjct: 408 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 444 >U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone receptor familyprotein 21, isoform e protein. Length = 450 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392 F + N K L + ++LSD H V Q +TE+ +H Sbjct: 410 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 446 >AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear receptor NHR-21b protein. Length = 400 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392 F + N K L + ++LSD H V Q +TE+ +H Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396 >AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear receptor NHR-21a protein. Length = 458 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 282 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 392 F + N K L + ++LSD H V Q +TE+ +H Sbjct: 418 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 454 >Z70682-7|CAA94585.2| 531|Caenorhabditis elegans Hypothetical protein F08G5.5 protein. Length = 531 Score = 27.9 bits (59), Expect = 7.1 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = +1 Query: 70 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVT-YLTSA-PLKIDHPKL 243 +L L T + ++L + F KSH + L + HDV+ Y SA LKI K+ Sbjct: 13 LLAHFLTTSNCSRILFLNMFNSKSHALTMMPLAERLFDDGHDVSMYTISANRLKIPSKKV 72 Query: 244 RQIEYL 261 + +E L Sbjct: 73 KILESL 78 >AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuronosyltransferase protein31 protein. Length = 521 Score = 27.9 bits (59), Expect = 7.1 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +1 Query: 67 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTS 213 I ++LV +L P G SH L EA H+VT+L S Sbjct: 5 IFFPILLVASEPLNILVYSPVFGGSHSKFMGNIADTLTEAGHNVTFLVS 53 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,585,360 Number of Sequences: 27780 Number of extensions: 302197 Number of successful extensions: 772 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 757 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 772 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1560745544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -