BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20974 (683 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 1.6 DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 1.6 DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 1.6 DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 1.6 DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 1.6 AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.6 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.1 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.1 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.6 DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 4.7 DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 4.7 DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 4.7 DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 4.7 DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.7 DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 4.7 DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 4.7 DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 4.7 DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 4.7 DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 4.7 EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 6.3 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.3 DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.3 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 6.3 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.3 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.3 DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.3 DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.3 AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 8.3 AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.3 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.3 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.3 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.3 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.3 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.3 AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 8.3 >DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.8 bits (49), Expect = 1.6 Identities = 11/34 (32%), Positives = 14/34 (41%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + L PP Sbjct: 131 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRLRPP 164 >DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.8 bits (49), Expect = 1.6 Identities = 11/34 (32%), Positives = 14/34 (41%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + L PP Sbjct: 131 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRLRPP 164 >DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.8 bits (49), Expect = 1.6 Identities = 11/34 (32%), Positives = 14/34 (41%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + L PP Sbjct: 131 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRLRPP 164 >DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.8 bits (49), Expect = 1.6 Identities = 11/34 (32%), Positives = 14/34 (41%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + L PP Sbjct: 131 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRLRPP 164 >DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.8 bits (49), Expect = 1.6 Identities = 11/34 (32%), Positives = 14/34 (41%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + L PP Sbjct: 131 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRLRPP 164 >AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. Length = 898 Score = 23.8 bits (49), Expect = 1.6 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +3 Query: 240 IKTDRVSSTEKGFDFDGLFNFKKLINKEVDLSDT 341 +K D + ++ +D + N KLI K VD +DT Sbjct: 436 LKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADT 469 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 23.4 bits (48), Expect = 2.1 Identities = 11/34 (32%), Positives = 14/34 (41%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + L PP Sbjct: 146 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRLRPP 179 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 23.4 bits (48), Expect = 2.1 Identities = 11/34 (32%), Positives = 14/34 (41%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + L PP Sbjct: 146 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRLRPP 179 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 22.6 bits (46), Expect = 3.6 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 382 WISMQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 415 >DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 142 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 175 >DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 142 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 175 >DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 142 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 175 >DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 142 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 175 >DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex determiner protein. Length = 176 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 134 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 167 >DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex determiner protein. Length = 182 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 140 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 173 >DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 137 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 170 >DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 137 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 170 >DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 137 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 170 >DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 22.2 bits (45), Expect = 4.7 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 137 WISIQEQIPRFRHIGPSTPFPRFIPPNAYRFRPP 170 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 21.8 bits (44), Expect = 6.3 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +3 Query: 627 VLNNYGTLLKLYTTDG 674 V+++YG +KLYT G Sbjct: 342 VVDSYGNHVKLYTKQG 357 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 138 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 171 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 21.8 bits (44), Expect = 6.3 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +3 Query: 627 VLNNYGTLLKLYTTDG 674 V+++YG +KLYT G Sbjct: 342 VVDSYGNHVKLYTKQG 357 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 371 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 404 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 6.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 371 WISMQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 404 >DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 8.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + P P + P + L PP Sbjct: 143 WISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 176 >DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 8.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + P P + P + L PP Sbjct: 143 WISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 176 >AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-activated ion channelvariant T protein. Length = 288 Score = 21.4 bits (43), Expect = 8.3 Identities = 11/49 (22%), Positives = 21/49 (42%) Frame = +3 Query: 330 LSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVIVEWMYSDLYS 476 LSDT ++ ++ N ++++LD + W + DL S Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLIS 175 >AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-activated ion channelvariant L protein. Length = 664 Score = 21.4 bits (43), Expect = 8.3 Identities = 11/49 (22%), Positives = 21/49 (42%) Frame = +3 Query: 330 LSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVIVEWMYSDLYS 476 LSDT ++ ++ N ++++LD + W + DL S Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLIS 175 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.4 bits (43), Expect = 8.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 354 WISIQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 387 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 8.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + S P P + P + PP Sbjct: 365 WISIQEQIPRFRYIGPSTPFPRFIPPNAYRFRPP 398 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 21.4 bits (43), Expect = 8.3 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = +3 Query: 30 NSNNY*INNVKGNY 71 N+NNY NN NY Sbjct: 325 NNNNYNNNNYNNNY 338 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 21.4 bits (43), Expect = 8.3 Identities = 10/34 (29%), Positives = 13/34 (38%) Frame = +2 Query: 509 WSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPP 610 W S E P + P P + P + L PP Sbjct: 371 WISMQEQIPRFRYIGPPTPFPRFIPPNAYRLRPP 404 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.4 bits (43), Expect = 8.3 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = +3 Query: 30 NSNNY*INNVKGNY 71 N+NNY NN NY Sbjct: 334 NNNNYNNNNYNNNY 347 >AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-activated ion channel protein. Length = 632 Score = 21.4 bits (43), Expect = 8.3 Identities = 11/49 (22%), Positives = 21/49 (42%) Frame = +3 Query: 330 LSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVIVEWMYSDLYS 476 LSDT ++ ++ N ++++LD + W + DL S Sbjct: 127 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLIS 175 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 177,707 Number of Sequences: 438 Number of extensions: 3963 Number of successful extensions: 60 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 60 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20830365 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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