Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20973
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    24   2.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.0  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    22   9.2  

>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 314 HCCSRALKPSARQRLRGGS 370
           H C  +LKPS  + LR G+
Sbjct: 17  HSCRMSLKPSVFESLRAGN 35


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 98   ERSQKTTSSRSEVEINEELQRGSGDDEGTGRRRP 199
            E  +K  +S+ ++ I+EEL     DDEG G   P
Sbjct: 1217 EGEEKRDASKEDLGIDEEL-----DDEGEGDEGP 1245


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 83  FTALILIHILMENREPSVRSNETTVP 6
           +TA    H+L  +  P V S  TT P
Sbjct: 517 YTAHFPTHLLPSSLYPPVSSESTTAP 542


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,009
Number of Sequences: 2352
Number of extensions: 4609
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)