Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20973
         (392 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065914-1|BAC06129.1| 1464|Homo sapiens seven transmembrane hel...    35   0.11 
BC040145-1|AAH40145.1|  521|Homo sapiens ELK4, ETS-domain protei...    30   2.4  
BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor proline...    29   7.2  
AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterat...    28   9.5  
AL133063-1|CAB61387.1|  618|Homo sapiens hypothetical protein pr...    28   9.5  
AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterat...    28   9.5  
AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterat...    28   9.5  

>AB065914-1|BAC06129.1| 1464|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1464

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +2

Query: 92  SSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRRPGEP 208
           +S RS   + + S    N   QRG G   G GRRRPG P
Sbjct: 83  TSSRSGSGSGASSAEAANSHPQRGEGRAPGAGRRRPGPP 121


>BC040145-1|AAH40145.1|  521|Homo sapiens ELK4, ETS-domain protein
           (SRF accessory protein 1) protein.
          Length = 521

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = -3

Query: 369 EPPRRRCLALGFRARLQQ*YGGWR-----APDGLWTRAACLGGRAAPPARXTHPSS 217
           + PRRRC   G   R  +  GG R     AP GL   AA   G AA  A    PSS
Sbjct: 3   QDPRRRCRVRGRGGRGARSRGGGRCGRLRAPGGLGLAAAAFYGSAAGVAAAAAPSS 58


>BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/54 (25%), Positives = 19/54 (35%)
 Frame = +2

Query: 155 QRGSGDDEGTGRRRPGEPXXXXXXXXXXXXXXXXPPKQAARVHRPSGARHPPYH 316
           ++G G     G + PG P                PP++     R     HPPYH
Sbjct: 199 KQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPRRGGGEPRGGRQHHPPYH 252


>AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterator-3
            protein.
          Length = 2240

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 306  GWRAPDGLWTRAACLGGRAAPPARXTHPSSPANG 205
            GW+A  G  TR A +G  +A PAR     +P  G
Sbjct: 1633 GWKAEPGEGTRPATVGDSSARPARRVLLPTPPCG 1666


>AL133063-1|CAB61387.1|  618|Homo sapiens hypothetical protein
           protein.
          Length = 618

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 306 GWRAPDGLWTRAACLGGRAAPPARXTHPSSPANG 205
           GW+A  G  TR A +G  +A PAR     +P  G
Sbjct: 11  GWKAEPGEGTRPATVGDSSARPARRVLLPTPPCG 44


>AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterator 1
            protein.
          Length = 2240

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 306  GWRAPDGLWTRAACLGGRAAPPARXTHPSSPANG 205
            GW+A  G  TR A +G  +A PAR     +P  G
Sbjct: 1633 GWKAEPGEGTRPATVGDSSARPARRVLLPTPPCG 1666


>AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterator 1
            protein.
          Length = 2240

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 306  GWRAPDGLWTRAACLGGRAAPPARXTHPSSPANG 205
            GW+A  G  TR A +G  +A PAR     +P  G
Sbjct: 1633 GWKAEPGEGTRPATVGDSSARPARRVLLPTPPCG 1666


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,093,641
Number of Sequences: 237096
Number of extensions: 771450
Number of successful extensions: 2478
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2476
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)