BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20973 (392 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY121674-1|AAM52001.1| 611|Drosophila melanogaster RE22741p pro... 29 2.9 AF296285-1|AAL33883.1| 611|Drosophila melanogaster SPZ3 protein. 29 2.9 AE014134-1358|AAF52574.2| 611|Drosophila melanogaster CG7104-PA... 29 2.9 AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p pro... 27 6.7 AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing fac... 27 6.7 AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA... 27 6.7 >AY121674-1|AAM52001.1| 611|Drosophila melanogaster RE22741p protein. Length = 611 Score = 28.7 bits (61), Expect = 2.9 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 89 TSSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRRPGE 205 +SS S +T+ +S +++ + G G EG+ R PG+ Sbjct: 133 SSSRSSSSSTTGQSSIQLTQTHASGRGPAEGSYSRYPGQ 171 >AF296285-1|AAL33883.1| 611|Drosophila melanogaster SPZ3 protein. Length = 611 Score = 28.7 bits (61), Expect = 2.9 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 89 TSSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRRPGE 205 +SS S +T+ +S +++ + G G EG+ R PG+ Sbjct: 133 SSSRSSSSSTTGQSSIQLTQTHASGRGPAEGSYSRYPGQ 171 >AE014134-1358|AAF52574.2| 611|Drosophila melanogaster CG7104-PA protein. Length = 611 Score = 28.7 bits (61), Expect = 2.9 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 89 TSSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRRPGE 205 +SS S +T+ +S +++ + G G EG+ R PG+ Sbjct: 133 SSSRSSSSSTTGQSSIQLTQTHASGRGPAEGSYSRYPGQ 171 >AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p protein. Length = 513 Score = 27.5 bits (58), Expect = 6.7 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 130 RSRNQRRTSARKWGR*GNRKATARRAVSRTR 222 RSR+ R TS R+ R G+R+ RR+VSR+R Sbjct: 300 RSRSHRSTSRRRSRRSGSRE---RRSVSRSR 327 >AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing factor SRp54 protein. Length = 513 Score = 27.5 bits (58), Expect = 6.7 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 130 RSRNQRRTSARKWGR*GNRKATARRAVSRTR 222 RSR+ R TS R+ R G+R+ RR+VSR+R Sbjct: 300 RSRSHRSTSRRRSRRSGSRE---RRSVSRSR 327 >AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA protein. Length = 513 Score = 27.5 bits (58), Expect = 6.7 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 130 RSRNQRRTSARKWGR*GNRKATARRAVSRTR 222 RSR+ R TS R+ R G+R+ RR+VSR+R Sbjct: 300 RSRSHRSTSRRRSRRSGSRE---RRSVSRSR 327 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,422,117 Number of Sequences: 53049 Number of extensions: 245455 Number of successful extensions: 1020 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 939 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1020 length of database: 24,988,368 effective HSP length: 77 effective length of database: 20,903,595 effective search space used: 1107890535 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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