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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20973
         (392 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81067-4|CAB02976.2|  632|Caenorhabditis elegans Hypothetical pr...    30   0.68 
AF077529-4|AAC26255.2|  783|Caenorhabditis elegans Hypothetical ...    29   1.2  
Z81576-3|CAB04641.1|  534|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z35595-5|CAA84636.1|  952|Caenorhabditis elegans Hypothetical pr...    27   3.6  
U97012-3|AAK39144.2|  588|Caenorhabditis elegans Groundhog (hedg...    27   3.6  
AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical ...    27   3.6  
AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical ...    27   3.6  
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    27   4.8  
Z34799-3|CAA84316.3|  539|Caenorhabditis elegans Hypothetical pr...    26   8.4  
U21320-7|AAA62533.1|  558|Caenorhabditis elegans Hypothetical pr...    26   8.4  

>Z81067-4|CAB02976.2|  632|Caenorhabditis elegans Hypothetical
           protein F23A7.5 protein.
          Length = 632

 Score = 29.9 bits (64), Expect = 0.68
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
 Frame = +1

Query: 19  SLERTLGSRFSIKMCIRISAVN----PHEFGTVTKN-DVVEIRSRNQRRTSARKWGR*GN 183
           SL  TLG   + K+ I + A+     P   G++ K       RSR+ RR S  + G  G+
Sbjct: 546 SLALTLGPEDAAKLNIDVEALKKKLIPSTSGSIEKRRSQSRSRSRDSRRHSRSRSGSRGS 605

Query: 184 RKATARRA 207
           R+ + RRA
Sbjct: 606 RRRSDRRA 613


>AF077529-4|AAC26255.2|  783|Caenorhabditis elegans Hypothetical
           protein C09E8.1a protein.
          Length = 783

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 83  IRTSSERSQKTTSSRSEVEINE-ELQRGSGDDEG 181
           IR  S    + +++R   E++E EL RG+GDD G
Sbjct: 734 IRAHSVEHNRPSNTREASEVDEAELPRGAGDDNG 767


>Z81576-3|CAB04641.1|  534|Caenorhabditis elegans Hypothetical
           protein R10E8.4 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 167 HFLAEVLR*FLLLISTTSFFVTVPNSCGFTALIL 66
           H + E+LR   +L+    F +TVP+  G  A IL
Sbjct: 117 HHITEILRKREILLKVNEFVLTVPSKNGHVASIL 150


>Z35595-5|CAA84636.1|  952|Caenorhabditis elegans Hypothetical
           protein C01G6.5 protein.
          Length = 952

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 92  SSERSQKTTSSRSEVEINEELQRGSGDDEG 181
           SS+R QK TSSR   +++E       +D+G
Sbjct: 725 SSKRKQKDTSSRKMKQLDESSADSDSEDDG 754


>U97012-3|AAK39144.2|  588|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 9 protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +1

Query: 76  AVNPHEFGTVTKNDVVEIRSRNQRRTSARKWGR*GNRKATAR 201
           A NP++    T+N V   RSRN   T+ RK GR G +  +++
Sbjct: 244 AENPYQ----TRNGVNNYRSRNSYGTNNRKHGRNGKKGKSSK 281


>AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical
           protein ZK484.4a protein.
          Length = 919

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 89  TSSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRR 196
           T  E+ QK T+   E+E+NEE + G    E T +R+
Sbjct: 438 TPDEKYQKKTTKVEEIEMNEE-EDGEIGAESTSKRK 472


>AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical
           protein ZK484.4b protein.
          Length = 873

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 89  TSSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRR 196
           T  E+ QK T+   E+E+NEE + G    E T +R+
Sbjct: 438 TPDEKYQKKTTKVEEIEMNEE-EDGEIGAESTSKRK 472


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
            protein Y55F3BR.2 protein.
          Length = 1594

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 311  YHCCSRALKPSARQRLRGG 367
            Y CCS+  K S   R+RGG
Sbjct: 1478 YFCCSKQTKKSNSNRIRGG 1496


>Z34799-3|CAA84316.3|  539|Caenorhabditis elegans Hypothetical
           protein F34D10.6 protein.
          Length = 539

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 141 STKNFSEEVGTMREQEGDGPESR*PDSMDEYXG 239
           +T+  S    TMR +E D PE   PD ++   G
Sbjct: 286 ATRKKSTSDNTMRSRESDSPEGIEPDVLNRIQG 318


>U21320-7|AAA62533.1|  558|Caenorhabditis elegans Hypothetical
           protein K04G7.1 protein.
          Length = 558

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 95  SERSQKTTSSRSEVEINEELQRGS 166
           S RSQ++TSS S  ++N E QR S
Sbjct: 346 SSRSQESTSSASPQKMNHEQQRYS 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,523,915
Number of Sequences: 27780
Number of extensions: 114991
Number of successful extensions: 462
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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