BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20973 (392 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical pr... 30 0.68 AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 29 1.2 Z81576-3|CAB04641.1| 534|Caenorhabditis elegans Hypothetical pr... 28 2.7 Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 27 3.6 U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 27 3.6 AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 27 3.6 AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 27 3.6 AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 4.8 Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical pr... 26 8.4 U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical pr... 26 8.4 >Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical protein F23A7.5 protein. Length = 632 Score = 29.9 bits (64), Expect = 0.68 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Frame = +1 Query: 19 SLERTLGSRFSIKMCIRISAVN----PHEFGTVTKN-DVVEIRSRNQRRTSARKWGR*GN 183 SL TLG + K+ I + A+ P G++ K RSR+ RR S + G G+ Sbjct: 546 SLALTLGPEDAAKLNIDVEALKKKLIPSTSGSIEKRRSQSRSRSRDSRRHSRSRSGSRGS 605 Query: 184 RKATARRA 207 R+ + RRA Sbjct: 606 RRRSDRRA 613 >AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical protein C09E8.1a protein. Length = 783 Score = 29.1 bits (62), Expect = 1.2 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 83 IRTSSERSQKTTSSRSEVEINE-ELQRGSGDDEG 181 IR S + +++R E++E EL RG+GDD G Sbjct: 734 IRAHSVEHNRPSNTREASEVDEAELPRGAGDDNG 767 >Z81576-3|CAB04641.1| 534|Caenorhabditis elegans Hypothetical protein R10E8.4 protein. Length = 534 Score = 27.9 bits (59), Expect = 2.7 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 167 HFLAEVLR*FLLLISTTSFFVTVPNSCGFTALIL 66 H + E+LR +L+ F +TVP+ G A IL Sbjct: 117 HHITEILRKREILLKVNEFVLTVPSKNGHVASIL 150 >Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical protein C01G6.5 protein. Length = 952 Score = 27.5 bits (58), Expect = 3.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 92 SSERSQKTTSSRSEVEINEELQRGSGDDEG 181 SS+R QK TSSR +++E +D+G Sbjct: 725 SSKRKQKDTSSRKMKQLDESSADSDSEDDG 754 >U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedgehog-like family)protein 9 protein. Length = 588 Score = 27.5 bits (58), Expect = 3.6 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 76 AVNPHEFGTVTKNDVVEIRSRNQRRTSARKWGR*GNRKATAR 201 A NP++ T+N V RSRN T+ RK GR G + +++ Sbjct: 244 AENPYQ----TRNGVNNYRSRNSYGTNNRKHGRNGKKGKSSK 281 >AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical protein ZK484.4a protein. Length = 919 Score = 27.5 bits (58), Expect = 3.6 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 89 TSSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRR 196 T E+ QK T+ E+E+NEE + G E T +R+ Sbjct: 438 TPDEKYQKKTTKVEEIEMNEE-EDGEIGAESTSKRK 472 >AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical protein ZK484.4b protein. Length = 873 Score = 27.5 bits (58), Expect = 3.6 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 89 TSSERSQKTTSSRSEVEINEELQRGSGDDEGTGRRR 196 T E+ QK T+ E+E+NEE + G E T +R+ Sbjct: 438 TPDEKYQKKTTKVEEIEMNEE-EDGEIGAESTSKRK 472 >AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical protein Y55F3BR.2 protein. Length = 1594 Score = 27.1 bits (57), Expect = 4.8 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +2 Query: 311 YHCCSRALKPSARQRLRGG 367 Y CCS+ K S R+RGG Sbjct: 1478 YFCCSKQTKKSNSNRIRGG 1496 >Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical protein F34D10.6 protein. Length = 539 Score = 26.2 bits (55), Expect = 8.4 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 Query: 141 STKNFSEEVGTMREQEGDGPESR*PDSMDEYXG 239 +T+ S TMR +E D PE PD ++ G Sbjct: 286 ATRKKSTSDNTMRSRESDSPEGIEPDVLNRIQG 318 >U21320-7|AAA62533.1| 558|Caenorhabditis elegans Hypothetical protein K04G7.1 protein. Length = 558 Score = 26.2 bits (55), Expect = 8.4 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +2 Query: 95 SERSQKTTSSRSEVEINEELQRGS 166 S RSQ++TSS S ++N E QR S Sbjct: 346 SSRSQESTSSASPQKMNHEQQRYS 369 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,523,915 Number of Sequences: 27780 Number of extensions: 114991 Number of successful extensions: 462 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 462 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 462 length of database: 12,740,198 effective HSP length: 74 effective length of database: 10,684,478 effective search space used: 598330768 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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