Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20972
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.60 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.6  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   7.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 507 HSGYINSXWCDSTEASSWQCWYSRHHKENR 596
           H G+ +S WC+ +  SS     SRHH +++
Sbjct: 139 HQGFSSSTWCNYSAYSS----ASRHHVDHQ 164


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 404 WLSQECYRRLVSQEPRWRLLFVGLQHHPVRAFRLLFL 294
           WLS      L  +  +W LLF  L H   R   L+ L
Sbjct: 146 WLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQL 182


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 404 WLSQECYRRLVSQEPRWRLLFVGLQHHPVRAFRLLFL 294
           WLS      L  +  +W LLF  L H   R   L+ L
Sbjct: 72  WLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQL 108


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 464 VFLLVGQPAFHLLFESCPL 408
           VF +  +P  +L+F  CP+
Sbjct: 146 VFFVENEPILYLIFSYCPI 164


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 464 PVYKILTAKSGDQTA 508
           PV  IL  +SGD+TA
Sbjct: 81  PVSYILNTRSGDETA 95


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 99  VPVKLSAGNMPVKLAGNAVPLKIGTT 176
           VP+     N  VKLA     L +GTT
Sbjct: 62  VPIITRVINEEVKLASGDYTLPVGTT 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,566
Number of Sequences: 336
Number of extensions: 3794
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)