Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20972
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 27 0.23
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 27 0.23
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 25 0.70
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 25 0.70
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.6
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 26.6 bits (56), Expect = 0.23
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 221 TSHCWKSTLETCAGNV--KIGTSNVLVKTAGGMPL 319
T HCW + +T GN K SN+L T G + L
Sbjct: 256 TLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVL 290
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 26.6 bits (56), Expect = 0.23
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 221 TSHCWKSTLETCAGNV--KIGTSNVLVKTAGGMPL 319
T HCW + +T GN K SN+L T G + L
Sbjct: 256 TLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVL 290
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 25.0 bits (52), Expect = 0.70
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 197 SQQCAESRTSHCWKSTLETCAGNVK-IGTSNVLVKT 301
+ +CA + + C +S L C N+K I S LV+T
Sbjct: 163 ASKCALTTLTDCLRSELAQCESNIKVISISPDLVET 198
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 25.0 bits (52), Expect = 0.70
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -1
Query: 279 VPILTLPAQVSRVDFQQ*LVLLSAHCWESIFLEC**YQSLVGLHYLQV*QAYYQHSTSQE 100
VP+L + A V + F++ V+L E + + LH +V Y+HST Q
Sbjct: 6 VPVLLVTANVGSI-FEEPSVMLKIWTEEFLSTILRLDPKFIALHCQEVGGKNYEHSTRQV 64
Query: 99 QHHSRL 82
+ RL
Sbjct: 65 EDFVRL 70
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 350 VATGVPVKLGAGNIPVIASSGG 415
VA G G +PV+ + GG
Sbjct: 566 VAAAAVAAAGVGGVPVVGAGGG 587
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 154 TALPASLTGILPALNFTGTAPLPP 83
T T LPA + TGT P P
Sbjct: 218 TVTTTGATTTLPAASATGTGPATP 241
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164
VPV + GN P + G VP++
Sbjct: 126 VPVPIYCGNFPSRPMGPWVPMQ 147
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 135 KLAGNAVPLKIGTTNIQGKLTPNSVQK 215
K GN V LK T + L P+S+++
Sbjct: 510 KYRGNGVSLKGETVGLLNALPPSSMKE 536
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,079
Number of Sequences: 438
Number of extensions: 4391
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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