BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20972 (702 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 27 0.23 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 27 0.23 AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 25 0.70 AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 25 0.70 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.7 DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.5 DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.5 DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.5 DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.5 DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.5 DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.5 DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.5 DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.5 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.6 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 26.6 bits (56), Expect = 0.23 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = +2 Query: 221 TSHCWKSTLETCAGNV--KIGTSNVLVKTAGGMPL 319 T HCW + +T GN K SN+L T G + L Sbjct: 256 TLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVL 290 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 26.6 bits (56), Expect = 0.23 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = +2 Query: 221 TSHCWKSTLETCAGNV--KIGTSNVLVKTAGGMPL 319 T HCW + +T GN K SN+L T G + L Sbjct: 256 TLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVL 290 >AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydrogenase/reductase protein. Length = 246 Score = 25.0 bits (52), Expect = 0.70 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +2 Query: 197 SQQCAESRTSHCWKSTLETCAGNVK-IGTSNVLVKT 301 + +CA + + C +S L C N+K I S LV+T Sbjct: 163 ASKCALTTLTDCLRSELAQCESNIKVISISPDLVET 198 >AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. Length = 388 Score = 25.0 bits (52), Expect = 0.70 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = -1 Query: 279 VPILTLPAQVSRVDFQQ*LVLLSAHCWESIFLEC**YQSLVGLHYLQV*QAYYQHSTSQE 100 VP+L + A V + F++ V+L E + + LH +V Y+HST Q Sbjct: 6 VPVLLVTANVGSI-FEEPSVMLKIWTEEFLSTILRLDPKFIALHCQEVGGKNYEHSTRQV 64 Query: 99 QHHSRL 82 + RL Sbjct: 65 EDFVRL 70 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 22.6 bits (46), Expect = 3.7 Identities = 8/22 (36%), Positives = 11/22 (50%) Frame = +2 Query: 350 VATGVPVKLGAGNIPVIASSGG 415 VA G G +PV+ + GG Sbjct: 566 VAAAAVAAAGVGGVPVVGAGGG 587 Score = 22.2 bits (45), Expect = 4.9 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = -3 Query: 154 TALPASLTGILPALNFTGTAPLPP 83 T T LPA + TGT P P Sbjct: 218 TVTTTGATTTLPAASATGTGPATP 241 >DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144 >DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144 >DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144 >DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144 >DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144 >DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144 >DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 123 VPVPIYCGNFPSRPMGPWVPMQ 144 >DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex determiner protein. Length = 186 Score = 21.8 bits (44), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 99 VPVKLSAGNMPVKLAGNAVPLK 164 VPV + GN P + G VP++ Sbjct: 126 VPVPIYCGNFPSRPMGPWVPMQ 147 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 21.4 bits (43), Expect = 8.6 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +3 Query: 135 KLAGNAVPLKIGTTNIQGKLTPNSVQK 215 K GN V LK T + L P+S+++ Sbjct: 510 KYRGNGVSLKGETVGLLNALPPSSMKE 536 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 196,079 Number of Sequences: 438 Number of extensions: 4391 Number of successful extensions: 20 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21561255 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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