Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20971
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli... 129 8e-30
AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein. 129 8e-30
AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein p... 129 8e-30
BC036710-1|AAH36710.1| 847|Homo sapiens FtsJ homolog 3 (E. coli... 57 7e-08
AK027463-1|BAB55128.1| 493|Homo sapiens protein ( Homo sapiens ... 57 7e-08
AF327355-1|AAL56015.1| 847|Homo sapiens hypothetical protein SB... 57 7e-08
BC000131-1|AAH00131.2| 734|Homo sapiens FTSJ3 protein protein. 49 2e-05
BC114564-1|AAI14565.1| 240|Homo sapiens FTSJ2 protein protein. 48 3e-05
BC114514-1|AAI14515.1| 246|Homo sapiens FtsJ homolog 2 (E. coli... 48 3e-05
AF093415-1|AAF22488.1| 246|Homo sapiens cell division protein F... 48 3e-05
D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein. 31 4.1
BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein. 31 4.1
AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein. 31 4.1
AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein. 31 4.1
BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain cont... 30 7.1
AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein pr... 30 7.1
AK023500-1|BAB14590.1| 474|Homo sapiens protein ( Homo sapiens ... 30 7.1
AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein. 30 7.1
>BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli)
protein.
Length = 329
Score = 129 bits (312), Expect = 8e-30
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEY 445
+VAVDLQAMA LPGV QIQGDIT+ TA II+ F+G ADLVVCDGAPDVTGLHD+DEY
Sbjct: 71 VVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEY 130
Query: 446 VQSQLLLAALNITTHVLKNEG 508
+Q+QLLLAALNI THVLK G
Sbjct: 131 MQAQLLLAALNIATHVLKPGG 151
Score = 102 bits (244), Expect = 1e-21
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 511 FVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVNP 690
FVAKIFRG+DV+LLYSQL+ FF V +KPRSSRNSSIEAF +C+ Y+PPE ++P++ P
Sbjct: 153 FVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKP 212
Query: 691 LLDHKY 708
LLDH Y
Sbjct: 213 LLDHSY 218
Score = 91.5 bits (217), Expect = 3e-18
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +1
Query: 46 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
MG+TSKDKRD+YYRLAKE GWRARSAFKLLQ+++E+ +F GV RAVDLCA
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCA 50
>AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein.
Length = 329
Score = 129 bits (312), Expect = 8e-30
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEY 445
+VAVDLQAMA LPGV QIQGDIT+ TA II+ F+G ADLVVCDGAPDVTGLHD+DEY
Sbjct: 71 VVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEY 130
Query: 446 VQSQLLLAALNITTHVLKNEG 508
+Q+QLLLAALNI THVLK G
Sbjct: 131 MQAQLLLAALNIATHVLKPGG 151
Score = 102 bits (244), Expect = 1e-21
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 511 FVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVNP 690
FVAKIFRG+DV+LLYSQL+ FF V +KPRSSRNSSIEAF +C+ Y+PPE ++P++ P
Sbjct: 153 FVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKP 212
Query: 691 LLDHKY 708
LLDH Y
Sbjct: 213 LLDHSY 218
Score = 91.5 bits (217), Expect = 3e-18
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +1
Query: 46 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
MG+TSKDKRD+YYRLAKE GWRARSAFKLLQ+++E+ +F GV RAVDLCA
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCA 50
>AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein
protein.
Length = 327
Score = 129 bits (312), Expect = 8e-30
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEY 445
+VAVDLQAMA LPGV QIQGDIT+ TA II+ F+G ADLVVCDGAPDVTGLHD+DEY
Sbjct: 71 VVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEY 130
Query: 446 VQSQLLLAALNITTHVLKNEG 508
+Q+QLLLAALNI THVLK G
Sbjct: 131 MQAQLLLAALNIATHVLKPGG 151
Score = 102 bits (244), Expect = 1e-21
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 511 FVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVNP 690
FVAKIFRG+DV+LLYSQL+ FF V +KPRSSRNSSIEAF +C+ Y+PPE ++P++ P
Sbjct: 153 FVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDLSKP 212
Query: 691 LLDHKY 708
LLDH Y
Sbjct: 213 LLDHSY 218
Score = 91.5 bits (217), Expect = 3e-18
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +1
Query: 46 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
MG+TSKDKRD+YYRLAKE GWRARSAFKLLQ+++E+ +F GV RAVDLCA
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCA 50
>BC036710-1|AAH36710.1| 847|Homo sapiens FtsJ homolog 3 (E. coli)
protein.
Length = 847
Score = 56.8 bits (131), Expect = 7e-08
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1
Query: 49 GKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
GK K +RD +Y LAKE G+R+RSAFKL+Q+N + +DLCA
Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Score = 52.8 bits (121), Expect = 1e-06
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEY 445
IV VDL + LP V +Q DIT + A+ +E + K D+V+ DGAP+V D Y
Sbjct: 72 IVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAY 131
Query: 446 VQSQLLLAALNITTHVLKNEG 508
Q+ L L AL + L G
Sbjct: 132 SQAHLTLMALRLACDFLARGG 152
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
SF+ K+FR +D L +Q F+ V +KP++SR+ S E FV+C+ + P+ +
Sbjct: 153 SFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFD 212
Query: 688 P 690
P
Sbjct: 213 P 213
>AK027463-1|BAB55128.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ14557 fis, clone NT2RM2001896, weakly similar to
CELL DIVISION PROTEIN FTSJ. ).
Length = 493
Score = 56.8 bits (131), Expect = 7e-08
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1
Query: 49 GKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
GK K +RD +Y LAKE G+R+RSAFKL+Q+N + +DLCA
Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Score = 52.8 bits (121), Expect = 1e-06
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEY 445
IV VDL + LP V +Q DIT + A+ +E + K D+V+ DGAP+V D Y
Sbjct: 72 IVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAY 131
Query: 446 VQSQLLLAALNITTHVLKNEG 508
Q+ L L AL + L G
Sbjct: 132 SQAHLTLMALRLACDFLARGG 152
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
SF+ K+FR +D L +Q F+ V +KP++SR+ S E FV+C+ + P+ +
Sbjct: 153 SFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFD 212
Query: 688 P 690
P
Sbjct: 213 P 213
>AF327355-1|AAL56015.1| 847|Homo sapiens hypothetical protein SB92
protein.
Length = 847
Score = 56.8 bits (131), Expect = 7e-08
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1
Query: 49 GKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
GK K +RD +Y LAKE G+R+RSAFKL+Q+N + +DLCA
Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Score = 52.8 bits (121), Expect = 1e-06
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEY 445
IV VDL + LP V +Q DIT + A+ +E + K D+V+ DGAP+V D Y
Sbjct: 72 IVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAY 131
Query: 446 VQSQLLLAALNITTHVLKNEG 508
Q+ L L AL + L G
Sbjct: 132 SQAHLTLMALRLACDFLARGG 152
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
SF+ K+FR +D L +Q F+ V +KP++SR+ S E FV+C+ + P+ +
Sbjct: 153 SFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFD 212
Query: 688 P 690
P
Sbjct: 213 P 213
>BC000131-1|AAH00131.2| 734|Homo sapiens FTSJ3 protein protein.
Length = 734
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
SF+ K+FR +D L +Q F+ V +KP++SR+ S E FV+C+ + P+ +
Sbjct: 40 SFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFD 99
Query: 688 P 690
P
Sbjct: 100 P 100
>BC114564-1|AAI14565.1| 240|Homo sapiens FTSJ2 protein protein.
Length = 240
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQI-QGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDE 442
++ VDL + L G + D+T T+ I+E G +AD+++ D AP+ TG D+D
Sbjct: 102 VLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDH 161
Query: 443 YVQSQLLLAALNITTHVLKNEG 508
L L L++T +L+ G
Sbjct: 162 DRLISLCLTLLSVTPDILQPGG 183
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 70 RDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVD 186
RD + + AK E +R RSAFKLL++NE + I LR +D
Sbjct: 34 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLD 72
>BC114514-1|AAI14515.1| 246|Homo sapiens FtsJ homolog 2 (E. coli)
protein.
Length = 246
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQI-QGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDE 442
++ VDL + L G + D+T T+ I+E G +AD+++ D AP+ TG D+D
Sbjct: 108 VLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDH 167
Query: 443 YVQSQLLLAALNITTHVLKNEG 508
L L L++T +L+ G
Sbjct: 168 DRLISLCLTLLSVTPDILQPGG 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 70 RDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVD 186
RD + + AK E +R RSAFKLL++NE + I LR +D
Sbjct: 40 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPSLRVLD 78
>AF093415-1|AAF22488.1| 246|Homo sapiens cell division protein FtsJ
protein.
Length = 246
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQI-QGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDE 442
++ VDL + L G + D+T T+ I+E G +AD+++ D AP+ TG D+D
Sbjct: 108 VLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDH 167
Query: 443 YVQSQLLLAALNITTHVLKNEG 508
L L L++T +L+ G
Sbjct: 168 DRLISLCLTLLSVTPDILQPGG 189
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 70 RDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVD 186
RD + + AK E +R RSAFKLL++NE + I LR +D
Sbjct: 40 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLD 78
>D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein.
Length = 882
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 323 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 490
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 381 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 440
Query: 491 VLKNEGH 511
+++ GH
Sbjct: 441 IVRTGGH 447
>BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 323 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 490
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 334 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 393
Query: 491 VLKNEGH 511
+++ GH
Sbjct: 394 IVRTGGH 400
>AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 323 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 490
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 334 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 393
Query: 491 VLKNEGH 511
+++ GH
Sbjct: 394 IVRTGGH 400
>AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein.
Length = 372
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 323 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 490
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 278 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 337
Query: 491 VLKNEGH 511
+++ GH
Sbjct: 338 IVRTGGH 344
>BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain
containing 136 protein.
Length = 1154
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +2
Query: 233 STKCCKY*DVKIVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVC 400
S+KC + K++ +QA+ + Q + ++ +QE ++EE + L+ADL +C
Sbjct: 669 SSKCNRNKQSKLLMEQMQALQVMYDAGQAKQELLQQEQGR-LLEERKRLQADLQLC 723
>AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein
protein.
Length = 1033
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +2
Query: 233 STKCCKY*DVKIVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVC 400
S+KC + K++ +QA+ + Q + ++ +QE ++EE + L+ADL +C
Sbjct: 545 SSKCNRNKQSKLLMEQMQALQVMYDAGQAKQELLQQEQGR-LLEERKRLQADLQLC 599
>AK023500-1|BAB14590.1| 474|Homo sapiens protein ( Homo sapiens
cDNA FLJ13438 fis, clone PLACE1002714, weakly similar to
MYOSIN HEAVY CHAIN, NON-MUSCLE. ).
Length = 474
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +2
Query: 233 STKCCKY*DVKIVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVC 400
S+KC + K++ +QA+ + Q + ++ +QE ++EE + L+ADL +C
Sbjct: 186 SSKCNRNKQSKLLMEQMQALQVMYDAGQAKQELLQQEQGR-LLEERKRLQADLQLC 240
>AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.
Length = 1270
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +2
Query: 233 STKCCKY*DVKIVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVC 400
S+KC + K++ +QA+ + Q + ++ +QE ++EE + L+ADL +C
Sbjct: 785 SSKCNRNKQSKLLMEQMQALQVMYDAGQAKQELLQQEQGR-LLEERKRLQADLQLC 839
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,573,814
Number of Sequences: 237096
Number of extensions: 2303727
Number of successful extensions: 4498
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4497
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -