Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20971
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical pr... 122 2e-28
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 58 8e-09
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 58 8e-09
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 58 8e-09
Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr... 34 0.12
U50300-6|AAC48109.1| 642|Caenorhabditis elegans Hypothetical pr... 31 0.81
U70845-2|AAB09100.1| 102|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 29 2.5
U40942-1|AAC47071.2| 132|Caenorhabditis elegans Hypothetical pr... 29 4.3
>Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical
protein R74.7 protein.
Length = 337
Score = 122 bits (295), Expect = 2e-28
Identities = 53/89 (59%), Positives = 72/89 (80%)
Frame = +2
Query: 257 DVKIVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDI 436
+ KIVA+DLQ MA +PGV Q+QGDIT +TAN +I+ F G K+D+V+CDGAPDVTG+H +
Sbjct: 69 EAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGEKSDIVICDGAPDVTGIHSL 128
Query: 437 DEYVQSQLLLAALNITTHVLKNEGHLWPK 523
DE++Q++L+LAA NIT+HVLK G+ K
Sbjct: 129 DEFMQAELILAAFNITSHVLKEGGNFLAK 157
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +1
Query: 46 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
MGKTS+DKRDIYYRLAKE WRARSAFKL+QI++E+ I GV RAVDLCA
Sbjct: 1 MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCA 50
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
+F+AKIFR ++ SLLY+Q+K++FK V ++KPRSSR SS EAFV+C Y+PPE +VP M
Sbjct: 153 NFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTMGK 212
Query: 688 PLLD 699
LD
Sbjct: 213 TSLD 216
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 57.6 bits (133), Expect = 8e-09
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDI-DE 442
IV VDL + + +QGDIT ET AI +E + AD V+ DGAP+V GL+ + D
Sbjct: 72 IVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGAPNV-GLNWVHDA 130
Query: 443 YVQSQLLLAALNITTHVLKNEGHLWPKYSEEKMFPC 550
+ Q+ L L+AL + T +L+ G K + C
Sbjct: 131 FQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 52 KTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
K K +RD YY+LAKE G+R+R+AFKL+Q+N+ + VDLCA
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCA 53
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
+FV K+FR D S L ++ FK V V KP +SR S E FV+CE Y P+ ++
Sbjct: 153 TFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYLD 212
Query: 688 P 690
P
Sbjct: 213 P 213
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 57.6 bits (133), Expect = 8e-09
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDI-DE 442
IV VDL + + +QGDIT ET AI +E + AD V+ DGAP+V GL+ + D
Sbjct: 72 IVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGAPNV-GLNWVHDA 130
Query: 443 YVQSQLLLAALNITTHVLKNEGHLWPKYSEEKMFPC 550
+ Q+ L L+AL + T +L+ G K + C
Sbjct: 131 FQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 52 KTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
K K +RD YY+LAKE G+R+R+AFKL+Q+N+ + VDLCA
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCA 53
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
+FV K+FR D S L ++ FK V V KP +SR S E FV+CE Y P+ ++
Sbjct: 153 TFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYLD 212
Query: 688 P 690
P
Sbjct: 213 P 213
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 57.6 bits (133), Expect = 8e-09
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 266 IVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDI-DE 442
IV VDL + + +QGDIT ET AI +E + AD V+ DGAP+V GL+ + D
Sbjct: 72 IVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGAPNV-GLNWVHDA 130
Query: 443 YVQSQLLLAALNITTHVLKNEGHLWPKYSEEKMFPC 550
+ Q+ L L+AL + T +L+ G K + C
Sbjct: 131 FQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 52 KTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCA 195
K K +RD YY+LAKE G+R+R+AFKL+Q+N+ + VDLCA
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCA 53
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +1
Query: 508 SFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMVN 687
+FV K+FR D S L ++ FK V V KP +SR S E FV+CE Y P+ ++
Sbjct: 153 TFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYLD 212
Query: 688 P 690
P
Sbjct: 213 P 213
>Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical
protein F45G2.9 protein.
Length = 214
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 91 AKEEGWRARSAFKLLQINEEYNIFNGVLRAVDL-CA 195
A+E +RARSAFKL++INE++ +D+ CA
Sbjct: 27 AREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCA 62
>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
protein ZK675.1 protein.
Length = 1405
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 486 VVMFNAASNN*DWTYSSISCKPVTSGAPSHTTKSALRPWNSSIIAFAVSCLVISP*ICFT 307
+ FN + + DW+ S I KP + + S+L +I V C+ I+P CF
Sbjct: 234 IASFNVSVHGVDWSLSDICFKPAPPSVAADSAASSL----GDVIDKIVPCIWITPIDCFW 289
Query: 306 PGNAAI 289
G+ A+
Sbjct: 290 EGSKAL 295
>U50300-6|AAC48109.1| 642|Caenorhabditis elegans Hypothetical
protein R03H4.1 protein.
Length = 642
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 279 STATILTS*YLQHFVEGSWLKLDSNCLVC---AKIHCTQYTIKYVV 151
++ TIL+S L H E +LKL+ L+C A IHC Y ++Y V
Sbjct: 320 TSLTILSSVVLHHTFEKLYLKLNWKSLICLLFALIHCNAY-LQYSV 364
>U70845-2|AAB09100.1| 102|Caenorhabditis elegans Hypothetical
protein F22H10.2 protein.
Length = 102
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 503 HS*AHGLLCSMQRVITEIGHIHQYHVSLLHLAHHH 399
H HGLL + +T GH H +H H HHH
Sbjct: 63 HHHHHGLLHGLGHALTG-GHHHHHHHGGHHFGHHH 96
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 323 GDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKN 502
GDI K I ++ G DLV DG+ + G E + S L+ A + + +L+
Sbjct: 196 GDIEKFTEEYLIKQKLAGT-FDLVTADGSTNTQGKEGEIESIVSSLISAEVEVALKLLRR 254
Query: 503 EGHL 514
G L
Sbjct: 255 NGRL 258
>U40942-1|AAC47071.2| 132|Caenorhabditis elegans Hypothetical
protein K02E10.5 protein.
Length = 132
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 185 IFAHTRQLESSFNQEPSTKCCKY*DVKIVAVDLQAMAA 298
+++ TRQ F +EPS++ +++IV +DL+A A
Sbjct: 77 VWSTTRQTMRRFKKEPSSRMPAGIEIRIVNIDLEAEGA 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,084,106
Number of Sequences: 27780
Number of extensions: 370775
Number of successful extensions: 1019
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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