Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20970
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro...    29   4.0  
AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p pro...    28   9.3  
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,...    28   9.3  
AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,...    28   9.3  
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,...    28   9.3  

>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
           protein.
          Length = 1062

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -1

Query: 464 NEKSLERSIKM*VRGKTVRKEKEKDRTKARWRRRLNEQSVKK 339
           N++S ER  +   R ++  +E+ KDR ++R RRR  E+ + K
Sbjct: 532 NQRSNERQ-RSKERQRSKERERSKDRQRSRERRRSKERQLSK 572


>AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p
           protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 464 NEKSLERSIKM*VRGKTVRKEKEKDRTKARWRRRLNEQSVKK 339
           N++S ER  +   R ++  +E+ KDR ++R RRR  E  + K
Sbjct: 175 NQRSNERQ-RSKERQRSKERERSKDRQRSRERRRSKEGQLSK 215


>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
           isoform A protein.
          Length = 1062

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 464 NEKSLERSIKM*VRGKTVRKEKEKDRTKARWRRRLNEQSVKK 339
           N++S ER  +   R ++  +E+ KDR ++R RRR  E  + K
Sbjct: 532 NQRSNERQ-RSKERQRSKERERSKDRQRSRERRRSKEGQLSK 572


>AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,
           isoform D protein.
          Length = 849

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 464 NEKSLERSIKM*VRGKTVRKEKEKDRTKARWRRRLNEQSVKK 339
           N++S ER  +   R ++  +E+ KDR ++R RRR  E  + K
Sbjct: 532 NQRSNERQ-RSKERQRSKERERSKDRQRSRERRRSKEGQLSK 572


>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
           isoform C protein.
          Length = 1107

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 464 NEKSLERSIKM*VRGKTVRKEKEKDRTKARWRRRLNEQSVKK 339
           N++S ER  +   R ++  +E+ KDR ++R RRR  E  + K
Sbjct: 532 NQRSNERQ-RSKERQRSKERERSKDRQRSRERRRSKEGQLSK 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,256,777
Number of Sequences: 53049
Number of extensions: 415292
Number of successful extensions: 937
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)