Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20970
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83233-4|CAB05758.1|  298|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92812-5|CAB07279.1|  326|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z78016-4|CAC42335.1|  359|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL021480-3|CAA16328.1|  410|Caenorhabditis elegans Hypothetical ...    27   8.6  
AL021480-2|CAA16327.1|  391|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF101318-4|AAC69346.1|  337|Caenorhabditis elegans Seven tm rece...    27   8.6  

>Z83233-4|CAB05758.1|  298|Caenorhabditis elegans Hypothetical
           protein K06B4.4 protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +3

Query: 291 FSNLLYFNIN*ILSDAFFYALLVQTSSPSCFCSVL--LFFLSNRFPSHSHLNTPFQTLFI 464
           F   L FN+  I+   FF  +  ++    C+C +L  +  +S+   S SH++     LF+
Sbjct: 31  FGLFLSFNLFAIIYGVFFVTIEPESKRWFCYCGILGVIHEVSHSGDSSSHIH---HLLFL 87

Query: 465 HTFRSYEKK 491
           H + S+E++
Sbjct: 88  HLY-SFERR 95


>Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical
           protein C31A11.7 protein.
          Length = 706

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 258 RLFYCCIFIVLFSNLLYFNIN*ILSDAFFYA---LLVQTSSPSCFCS-VLLFFLSNRF 419
           RL YC   +  F+   Y NIN   S   FY+   + +  + P+C  S +  FF S+ F
Sbjct: 606 RLSYCAYIVHFFTLFWYLNIN--DSSMHFYSTFQVFIYYAVPACLLSYIFAFFWSSLF 661


>Z92812-5|CAB07279.1|  326|Caenorhabditis elegans Hypothetical
           protein T03E6.5 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = +3

Query: 327 LSDAFFYALLVQTSSPSCF----CSVLLFFLSNRFPSHSHLNTPFQTLFIH 467
           L   FF A+L+QTS P C     CS L F +   + + +  N  F     H
Sbjct: 225 LQQIFFRAILIQTSMPICVLILPCSYLAFSMFTGYFNQAANNLSFIITAFH 275


>Z78016-4|CAC42335.1|  359|Caenorhabditis elegans Hypothetical
           protein R186.7 protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 60  ECIEYVPETESRDKIARNRRLLS 128
           E IE + ETE++D   RNRRL S
Sbjct: 143 EKIEKLKETENKDSKQRNRRLFS 165


>AL021480-3|CAA16328.1|  410|Caenorhabditis elegans Hypothetical
           protein Y39E4A.2b protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 136 FTASEVADPVCLRIFNCV*ILHSIKMKRDI 225
           FT   +ADP+C  +F+ + +  ++ + RDI
Sbjct: 281 FTGWTLADPICTFLFSIIVLFTTVTVMRDI 310


>AL021480-2|CAA16327.1|  391|Caenorhabditis elegans Hypothetical
           protein Y39E4A.2a protein.
          Length = 391

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 136 FTASEVADPVCLRIFNCV*ILHSIKMKRDI 225
           FT   +ADP+C  +F+ + +  ++ + RDI
Sbjct: 262 FTGWTLADPICTFLFSIIVLFTTVTVMRDI 291


>AF101318-4|AAC69346.1|  337|Caenorhabditis elegans Seven tm
           receptor protein 68 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +3

Query: 255 IRLFYCCI--FIVLFSNLLYFNI-N*ILSDAFFYALLVQTSSPSCF 383
           I + YCC+     +   L  F+  N  L   FF+AL+VQT  P+ F
Sbjct: 211 IIIIYCCLRMHFSMKKELAKFSTQNQKLQRQFFHALIVQTLGPTIF 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,605,013
Number of Sequences: 27780
Number of extensions: 239201
Number of successful extensions: 654
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)